Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES04227
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:73085720:73088203:-1 gene:SORBI_3003G427500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGACGCCGCTGTGGCGCCGCTCCTCGTCCTCGGCGTCACCGTCGCCATCCTGCTCTCC
ACGGGCCTCCGGTGCCGCGCGGGCCACCGCAACCACTGCCCCTACCCGAACCCCGTGCTT
GGCAACGTGGTGCCCTTTGTCCGCAACTTCCACCGCTTCCTCGACTGGGCCACGGACCAG
CTCGCTGCCGCCCCGACCTCCACCATCGAGGTGCGCGGAGCGCTCGGCCTCGGCAACGGC
GTCGCCACCGCGGACCCGGGCGTCGTCGACCACCTGCTGCGCGCCGGGTTCCCCAACTAT
GTCAAGGGCGCGCGCTTCGCGGGGCCCTTCGCCGACCTCCTCGGCAGCGGCATCTTCCTC
GCGGACGGCCGCCTGTGGAGCCTCCAGCGCAAACTCGCGTCCTACTCCTTCTCGTCCCGC
TCGCTGCGCCGCTTCTCGGGGCGCGTCCTCCGCGCCCACCTGCACCGCCGGCTCCTGCCC
CTCCTCGCGGCCGCGGCCGACTCCGGCGAGGCCGTTGACCTGCAGGACGTGCTCAAGCGC
TTCGCCTTCGACAACATCTGCGGCGTCGCGTTTGGGGTCGAGGCCTCGACGCTGCTCGAT
CTCGGGGAGGAGGACGGCGGGGGCAGGGGACGTCGCCGCCGGCACGATGCCTTCTTCAAG
GCTTTTGACGACGCCGTCGAGATCTCATTCGCGCGCATGCTCCACCCGACCGCCGTCGTG
TGGAAGGCGATGCGGCTCGCTGGCGTCGGAAGCGAGAGGCGGCTCCGCGAGGCCATCTGC
GTCGTAGACGAGCACGTCACGGAGATCATGGAGTCGGAGGAGCGGTCGCGCCGAGACGGC
AACGGGCAGCACCTGCTGTCGCGGTTCGCGGTGGCGATGGAGGAAGACGAGGGGAGCGAG
CTCGGCGCAATGTTCCAGTCGCCGGAGGCGAAGCGCCGGTTCCTGCGGGACATCGTCGTC
AGTTTCGTGCTCGCCGGGAAGGACTCTACGTCCTCCGCGCTCACATGGTTCTTCTGGCTC
CTCGCCGCCAACCCGCTCTGCGAACGGCGCGTGTACGAGGAGGCGTCGTCGCTCTCGGAC
CTCCACGGACACGGAGACGACGACCACGGCGTCGACGACGAAGGCGGCTACGACGAGCTC
AGGGGGATGCACTACCTGCACGCTGCGATCACCGAGGCGATGCGGCTGTACCCGCCGGTG
CCCATCAACTCGAAGGTAGCGGCCGCGGGGGAGGTGCTGCCGGACGGCACGACGGTTCGC
GCCGGTTGGTTCTCGGACTACTGCGCGTACGCTATGGGGAGGATGCCGCGGCTGTGGGGC
GACGACTGCCGCGAGTTCCGCCCCGAGCGGTGGCTCGACGGCGGCGGCGAGTTCGTGGCG
GTGGACGCGGCGAGGTACCCGGTCTTCCACGCCGGCCCGAGGGCGTGCCTCGGGAAGGAG
ATGGCGTACGTGCAGATGAAAACCGTTGTGGCTGCCGTGGTCCGGAGGTTCGCCGTGGAG
CCGGTGCGGGCGGCGAGCATGGAGGCGCCTCCGCCGTACGAGATGGCGGTGACGCTGAGG
ATGAAAGGCGGGCTGCCTGTGCGGATAAGGAGGCGGGAGAGCGACGCGGGCCGGCACTGA

Peptide Sequence

PEP ID

EES04227
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:73085720:73088203:-1 gene:SORBI_3003G427500 transcript:EES04227 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDAAVAPLLVLGVTVAILLSTGLRCRAGHRNHCPYPNPVLGNVVPFVRNFHRFLDWATDQ
LAAAPTSTIEVRGALGLGNGVATADPGVVDHLLRAGFPNYVKGARFAGPFADLLGSGIFL
ADGRLWSLQRKLASYSFSSRSLRRFSGRVLRAHLHRRLLPLLAAAADSGEAVDLQDVLKR
FAFDNICGVAFGVEASTLLDLGEEDGGGRGRRRRHDAFFKAFDDAVEISFARMLHPTAVV
WKAMRLAGVGSERRLREAICVVDEHVTEIMESEERSRRDGNGQHLLSRFAVAMEEDEGSE
LGAMFQSPEAKRRFLRDIVVSFVLAGKDSTSSALTWFFWLLAANPLCERRVYEEASSLSD
LHGHGDDDHGVDDEGGYDELRGMHYLHAAITEAMRLYPPVPINSKVAAAGEVLPDGTTVR
AGWFSDYCAYAMGRMPRLWGDDCREFRPERWLDGGGEFVAVDAARYPVFHAGPRACLGKE
MAYVQMKTVVAAVVRRFAVEPVRAASMEAPPPYEMAVTLRMKGGLPVRIRRRESDAGRH

Transcript Sequence

Transcript ID

EES04227
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:73085720:73088203:-1 gene:SORBI_3003G427500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGAAACATTAAATATAGACAAAAACAAAAACTAATTACACAGTTTAGCTGTAAATCACGA
GACGAATCTTTTGATCCTAGTTAGTATATGATTGGATAATATTTGTCACAAACAAACAAA
AGTGCTACAGTACTTAAAAGTTTTTCACTTTTCGGAACAAGGCATTCCCATGTCGTAGTC
GCAGGACAGTTCTGTCCCAAAAAAAGTCAACGTCACTAGGTCACCGTGAATGGTGAAGGC
AAGTGAATTGACACGAGCAGTTGGCCAAGCCACTGGCGACCACACGACTGAGCACAGCCT
CGTGATCACGCCATGGACGCCGCTGTGGCGCCGCTCCTCGTCCTCGGCGTCACCGTCGCC
ATCCTGCTCTCCACGGGCCTCCGGTGCCGCGCGGGCCACCGCAACCACTGCCCCTACCCG
AACCCCGTGCTTGGCAACGTGGTGCCCTTTGTCCGCAACTTCCACCGCTTCCTCGACTGG
GCCACGGACCAGCTCGCTGCCGCCCCGACCTCCACCATCGAGGTGCGCGGAGCGCTCGGC
CTCGGCAACGGCGTCGCCACCGCGGACCCGGGCGTCGTCGACCACCTGCTGCGCGCCGGG
TTCCCCAACTATGTCAAGGGCGCGCGCTTCGCGGGGCCCTTCGCCGACCTCCTCGGCAGC
GGCATCTTCCTCGCGGACGGCCGCCTGTGGAGCCTCCAGCGCAAACTCGCGTCCTACTCC
TTCTCGTCCCGCTCGCTGCGCCGCTTCTCGGGGCGCGTCCTCCGCGCCCACCTGCACCGC
CGGCTCCTGCCCCTCCTCGCGGCCGCGGCCGACTCCGGCGAGGCCGTTGACCTGCAGGAC
GTGCTCAAGCGCTTCGCCTTCGACAACATCTGCGGCGTCGCGTTTGGGGTCGAGGCCTCG
ACGCTGCTCGATCTCGGGGAGGAGGACGGCGGGGGCAGGGGACGTCGCCGCCGGCACGAT
GCCTTCTTCAAGGCTTTTGACGACGCCGTCGAGATCTCATTCGCGCGCATGCTCCACCCG
ACCGCCGTCGTGTGGAAGGCGATGCGGCTCGCTGGCGTCGGAAGCGAGAGGCGGCTCCGC
GAGGCCATCTGCGTCGTAGACGAGCACGTCACGGAGATCATGGAGTCGGAGGAGCGGTCG
CGCCGAGACGGCAACGGGCAGCACCTGCTGTCGCGGTTCGCGGTGGCGATGGAGGAAGAC
GAGGGGAGCGAGCTCGGCGCAATGTTCCAGTCGCCGGAGGCGAAGCGCCGGTTCCTGCGG
GACATCGTCGTCAGTTTCGTGCTCGCCGGGAAGGACTCTACGTCCTCCGCGCTCACATGG
TTCTTCTGGCTCCTCGCCGCCAACCCGCTCTGCGAACGGCGCGTGTACGAGGAGGCGTCG
TCGCTCTCGGACCTCCACGGACACGGAGACGACGACCACGGCGTCGACGACGAAGGCGGC
TACGACGAGCTCAGGGGGATGCACTACCTGCACGCTGCGATCACCGAGGCGATGCGGCTG
TACCCGCCGGTGCCCATCAACTCGAAGGTAGCGGCCGCGGGGGAGGTGCTGCCGGACGGC
ACGACGGTTCGCGCCGGTTGGTTCTCGGACTACTGCGCGTACGCTATGGGGAGGATGCCG
CGGCTGTGGGGCGACGACTGCCGCGAGTTCCGCCCCGAGCGGTGGCTCGACGGCGGCGGC
GAGTTCGTGGCGGTGGACGCGGCGAGGTACCCGGTCTTCCACGCCGGCCCGAGGGCGTGC
CTCGGGAAGGAGATGGCGTACGTGCAGATGAAAACCGTTGTGGCTGCCGTGGTCCGGAGG
TTCGCCGTGGAGCCGGTGCGGGCGGCGAGCATGGAGGCGCCTCCGCCGTACGAGATGGCG
GTGACGCTGAGGATGAAAGGCGGGCTGCCTGTGCGGATAAGGAGGCGGGAGAGCGACGCG
GGCCGGCACTGATCACGACAGGAAGCCCAATCACTCCAGCGGCAACTTCAGTTGGGCCAT
CGGTGTCAAGACTTAGGAGCCCAGAGTTGAAAGAAACTGAGAGAGAGCAAGAAGCAGAAG
CACATCGCAAATCGCAATGGTTAGTCAAGGAGATAGAGATTTGAAAGAGACAACTTCCTG
GATGTTCTTGTAAAATATTCCCTCCATAATTGATGATACAATTCTTTCTAGAATTTTTCG
AGGAGTAACAGTTTTAAATTTGATTAAATCTGTAAAAAATATTAACATCTATGATACTGA
ATAAATATCATATATTAGATTAAAAATAGAATGTATTTTAATATCTATTTAGAATCCTAA
ATACTAATGATATTTTTGAAAACTTAACTAAAATTAGAAAAGTTCGCCTCAATTGAAATC
TAAAATTGTTTTTTTAATGAAGGTACTACCACCTTTTCAAACAGGATTTGGTTGTCTTTT
TTTCTACAATTACTGTGTACAGCATTCCAGATCGAATGGGGTTATATGACACGAAATTGC
TCTACAGAGCTCCGATCAAGACAG