Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES04226
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:73053364:73060285:-1 gene:SORBI_3003G427100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGATGCAGCAGCAGCAACAACAGCTGCCACCTCCGCCGCAGCACCCGCCGCCCCAGGCT
GGCGGCGGCGGTGGGGACTTCTACCGCGGCCCGCCGATGCGGCAGCTGTCCGCGGCGTCT
TCCACCAATCTCCCGCCTGACTACGCCGCACACCCGGGCCCCCCGCCACAGCAGCAGCAT
CAGCCTCCTTACGACGCTTATGGTGACAGTTTTGGTGCTAAAAGGATGCGGAAGCCTGTC
CAGCGACGAACAGTGGACTACACAAGCAGTATTGTCCGTCATGTTCAGGCTCGCATGTGG
CAGCGGGACGCTAGGGATAGATTCACATTGCAGCCAACTCCAGCTGCTGTCCTGGATATG
TTACCGTCTGTTGCATATCCAGACAATCCCTCCACAAGTTTTGCTGCCAAATTTGTACAT
TCATCAATCAATAAGAACCGGTGCTCTATTAATCGTGTTTTGTGGACCACTACAGGCCGT
CGACTTATCACTGGATCACAAAGTGGTGAATTTACGCTATGGAATGGGCAATCTTTTAAC
TTTGAAATGATCCTTCAGGCTCATGATCTACCTGTGAGATCAATGGTTTGGAGTCACAAT
GAAAACTGGATGGTGACAGGCGATGATGGTGGTGCAATCAAGTATTGGCAAAGTAACATG
AACAATGTCAAAGTGAATAAAACAGCTCATGGAGAATCGGTTCGTGGTTTAAGTTTCTCC
AGAACCGACTTGAAGTTCTGCTCCTGCTCCGATGACAGAACCGTGAAGGTTTGGGACTTC
GCAAGATGCCAAGAGGAAAAATCATTAACTGGCCACGGTTGGGATGTTAAAACTGTTGAT
TGGCATCCTACAAAGTCTTTACTGGTTTCAGGTGGCAAAGACTATCTTGTGAAACTTTGG
GATGCAAAAAGTGGCAGAGAGCTGAGCTCATTCCATGGTCATAAAAATATTGTGCATTGT
GTGAAGTGGAATCAGAATGGGAACTGGGTACTGACTGCCTCAAAGGATCAGATTATTAAG
CTGTATGATATTAGATCCATGAAAGAGCTGCAATCCTTCCGTGGGCACACTAAGGACGTC
ACTGCATTGGCGTGGCATCCATTTCATGAAGAGTATTTTGTTAGTGGGAGCTTTGATGGA
GCTATATTTCATTGGTTGGTCGGCCATGAAGCTCCACAGGTTGAAATAAGTAACGCACAT
GACAGTAGTGTCTGGGATCTTTCGTGGCATCCTGTTGGCTATCTACTTTGCAGTGGGGGC
AATGATCATGCTACAAAGTTCTGGTGTAGAAACAGGCCGGGTGATCTTACCCGCGATAGA
TACAACAGTGGCCAGATGCAAGGTTATGGTGACCAACAACCTTTTGGTGCTCGTGGAATG
GGTGGATTCCAGATGCCTGAACCTCCAATAACGCCTGGACCATTTGCTCCTGGATTGTCA
CGCACTGAAGGTACAATCCCTGGCATTGGGGTTGCAATGACCTTGGCAGGCCAGTCTCTT
GATGGATCTGATGGAGAGCAGAGGCCATCTATTCCGGGTCTTCCACCTGGGCAACCCCCA
CTGCCACCAGGTCCTCATCCATCACTTCTTGGGCAGCAGCAACAGTATCAACAGATGCCT
CAGCAGCAACATCCCCAGTTTTCTCGGCCACCACCTACAAACATGCCCCAACTGCAGCCA
CCAGCTCACATGCTTTCACATTCACAAGGATCTCGGCCTACTCTTCCCCAGCTTCCACCA
ATGGGTGGACCATCAGTGCCATCACAAGTGAACCCACCGCTTCCGCCTATGCCTCACCCA
ACGGCAATGCAAGGTTCACAGAGTCAGATGATGCCCCAAATGCCACAGCACATGATGGGC
CTAAATCAGATGCATCCTGGTTCTGTGCCTCCTGGTACTGTACCCCCAATGGGTGGGTTC
CCAAGTGGGATGGGAAACATCCAAGGAGCATCAGGTTCGTCTGGCATACAAAATTTTCCT
ATGGGTGGCATGTATAATCGACCTCAGGGACAAATGGCTCCACAAGGACAAATGACATCC
ATTCCCGGTCTAAGCTCTTACCAGGGAATGGGCAATGTTGGCCTCACACCGCCCCCGCCG
CCACCACAGCATCCGCCGCCTCGAGGAGGCTCGGCACACCAGTGA

Peptide Sequence

PEP ID

EES04226
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:73053364:73060285:-1 gene:SORBI_3003G427100 transcript:EES04226 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MMQQQQQQLPPPPQHPPPQAGGGGGDFYRGPPMRQLSAASSTNLPPDYAAHPGPPPQQQH
QPPYDAYGDSFGAKRMRKPVQRRTVDYTSSIVRHVQARMWQRDARDRFTLQPTPAAVLDM
LPSVAYPDNPSTSFAAKFVHSSINKNRCSINRVLWTTTGRRLITGSQSGEFTLWNGQSFN
FEMILQAHDLPVRSMVWSHNENWMVTGDDGGAIKYWQSNMNNVKVNKTAHGESVRGLSFS
RTDLKFCSCSDDRTVKVWDFARCQEEKSLTGHGWDVKTVDWHPTKSLLVSGGKDYLVKLW
DAKSGRELSSFHGHKNIVHCVKWNQNGNWVLTASKDQIIKLYDIRSMKELQSFRGHTKDV
TALAWHPFHEEYFVSGSFDGAIFHWLVGHEAPQVEISNAHDSSVWDLSWHPVGYLLCSGG
NDHATKFWCRNRPGDLTRDRYNSGQMQGYGDQQPFGARGMGGFQMPEPPITPGPFAPGLS
RTEGTIPGIGVAMTLAGQSLDGSDGEQRPSIPGLPPGQPPLPPGPHPSLLGQQQQYQQMP
QQQHPQFSRPPPTNMPQLQPPAHMLSHSQGSRPTLPQLPPMGGPSVPSQVNPPLPPMPHP
TAMQGSQSQMMPQMPQHMMGLNQMHPGSVPPGTVPPMGGFPSGMGNIQGASGSSGIQNFP
MGGMYNRPQGQMAPQGQMTSIPGLSSYQGMGNVGLTPPPPPPQHPPPRGGSAHQ

Transcript Sequence

Transcript ID

EES04226
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:73053364:73060285:-1 gene:SORBI_3003G427100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTGACCCCTTTCCCGCCGCACGGATCCAAAACCCTAGCCCCGCCTCGGCGTTTCTCCCCT
CCCGGCGACGGCGAGGCGGCGGAGATGATGCAGCAGCAGCAACAACAGCTGCCACCTCCG
CCGCAGCACCCGCCGCCCCAGGCTGGCGGCGGCGGTGGGGACTTCTACCGCGGCCCGCCG
ATGCGGCAGCTGTCCGCGGCGTCTTCCACCAATCTCCCGCCTGACTACGCCGCACACCCG
GGCCCCCCGCCACAGCAGCAGCATCAGCCTCCTTACGACGCTTATGGTGACAGTTTTGGT
GCTAAAAGGATGCGGAAGCCTGTCCAGCGACGAACAGTGGACTACACAAGCAGTATTGTC
CGTCATGTTCAGGCTCGCATGTGGCAGCGGGACGCTAGGGATAGATTCACATTGCAGCCA
ACTCCAGCTGCTGTCCTGGATATGTTACCGTCTGTTGCATATCCAGACAATCCCTCCACA
AGTTTTGCTGCCAAATTTGTACATTCATCAATCAATAAGAACCGGTGCTCTATTAATCGT
GTTTTGTGGACCACTACAGGCCGTCGACTTATCACTGGATCACAAAGTGGTGAATTTACG
CTATGGAATGGGCAATCTTTTAACTTTGAAATGATCCTTCAGGCTCATGATCTACCTGTG
AGATCAATGGTTTGGAGTCACAATGAAAACTGGATGGTGACAGGCGATGATGGTGGTGCA
ATCAAGTATTGGCAAAGTAACATGAACAATGTCAAAGTGAATAAAACAGCTCATGGAGAA
TCGGTTCGTGGTTTAAGTTTCTCCAGAACCGACTTGAAGTTCTGCTCCTGCTCCGATGAC
AGAACCGTGAAGGTTTGGGACTTCGCAAGATGCCAAGAGGAAAAATCATTAACTGGCCAC
GGTTGGGATGTTAAAACTGTTGATTGGCATCCTACAAAGTCTTTACTGGTTTCAGGTGGC
AAAGACTATCTTGTGAAACTTTGGGATGCAAAAAGTGGCAGAGAGCTGAGCTCATTCCAT
GGTCATAAAAATATTGTGCATTGTGTGAAGTGGAATCAGAATGGGAACTGGGTACTGACT
GCCTCAAAGGATCAGATTATTAAGCTGTATGATATTAGATCCATGAAAGAGCTGCAATCC
TTCCGTGGGCACACTAAGGACGTCACTGCATTGGCGTGGCATCCATTTCATGAAGAGTAT
TTTGTTAGTGGGAGCTTTGATGGAGCTATATTTCATTGGTTGGTCGGCCATGAAGCTCCA
CAGGTTGAAATAAGTAACGCACATGACAGTAGTGTCTGGGATCTTTCGTGGCATCCTGTT
GGCTATCTACTTTGCAGTGGGGGCAATGATCATGCTACAAAGTTCTGGTGTAGAAACAGG
CCGGGTGATCTTACCCGCGATAGATACAACAGTGGCCAGATGCAAGGTTATGGTGACCAA
CAACCTTTTGGTGCTCGTGGAATGGGTGGATTCCAGATGCCTGAACCTCCAATAACGCCT
GGACCATTTGCTCCTGGATTGTCACGCACTGAAGGTACAATCCCTGGCATTGGGGTTGCA
ATGACCTTGGCAGGCCAGTCTCTTGATGGATCTGATGGAGAGCAGAGGCCATCTATTCCG
GGTCTTCCACCTGGGCAACCCCCACTGCCACCAGGTCCTCATCCATCACTTCTTGGGCAG
CAGCAACAGTATCAACAGATGCCTCAGCAGCAACATCCCCAGTTTTCTCGGCCACCACCT
ACAAACATGCCCCAACTGCAGCCACCAGCTCACATGCTTTCACATTCACAAGGATCTCGG
CCTACTCTTCCCCAGCTTCCACCAATGGGTGGACCATCAGTGCCATCACAAGTGAACCCA
CCGCTTCCGCCTATGCCTCACCCAACGGCAATGCAAGGTTCACAGAGTCAGATGATGCCC
CAAATGCCACAGCACATGATGGGCCTAAATCAGATGCATCCTGGTTCTGTGCCTCCTGGT
ACTGTACCCCCAATGGGTGGGTTCCCAAGTGGGATGGGAAACATCCAAGGAGCATCAGGT
TCGTCTGGCATACAAAATTTTCCTATGGGTGGCATGTATAATCGACCTCAGGGACAAATG
GCTCCACAAGGACAAATGACATCCATTCCCGGTCTAAGCTCTTACCAGGGAATGGGCAAT
GTTGGCCTCACACCGCCCCCGCCGCCACCACAGCATCCGCCGCCTCGAGGAGGCTCGGCA
CACCAGTGACCTGGAGCAAAACAAAGATTATACGGAACCTAGAGTTTTCCGTGACACTGA
ATTTGTAACATGTAATCCATCTGGAGCAATATCAGCATGTCGAGACTCTCCCGCAAATTC
GAAGGGATTTCTGCCCGATTTTTGCTCAGGCAGCTAGGATTTCGCTATCTCGTGCTGTGA
TTTAGAACTGGGAGGTCTTCTGTTCAGTGCCTTATTTATACTGTAATTCGAATTGTGTAT
TTACTTGTCGGCTGCTTGAATGTGGAACAGAGAATTCTTTGGCGCAGTAATGAGAAACAT
GAACTTTGTGCAGTTATCGT