Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES04178
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:72392722:72399764:-1 gene:SORBI_3003G418200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCCTCCGCCGCTTCCGCGCCGGTCTTCTCCCACCTTCTCGGCCCCCTCCCCCCTCCT
CCTCCAACTCCAATGCTCTCCACTCTCCTCCTCCGCCACCGCCTCGCCGCCGCTGCCTCC
TCCTCGCCGACCCACAGCACGCCTCTCCGTCTCCGCGCGCTCGTCGTCGCCGCCGCCGCC
ATGTCGTCGTCGTCCGCGCCTGCGCCCCACGGCGGCCGGAAGCCGAACCGCCTCGCCGCC
GAGCACAGCCCCTACCTGCTGCAGCACGCGCACAACCCTGTTGATTGGTACCCTTGGGGG
GACGAGGCTTTCCAGAAGGCTCGCGCCAAGGACGTCCCCATCTTCCTCTCGATTGGCTAT
AGCACATGCCATTGGTGTCATGTGATGGAGGTGGAGTCTTTTGAGAATGAGGAAGTGGCA
AAGTTGCTGAATGATTGGTTTGTTAGCATCAAGGTTGACCGTGAAGAGCGCCCAGATGTT
GATAAGGTATACATGACATATGTTTCGGCACTGCATGGTGGTGGTGGTTGGCCTTTGAGC
GTCTTTTTGTCTCCTGACTTGAAACCACTGATGGGTGGTACGTACTTTCCACCGGATGAT
AAGTATGGAAGACCGGGGTTCAAAACTGTATTGAGGAAGGTCAAGGAAGCCTGGGAAACT
AAACGTGAAGCGCTTGAGCGGTCGGGAAATCTTGTTATCGAACAATTAAGGGATGCATTA
TCTACTAAGGCTAGCTCTCAAGATGTGCCGAATGATCTGGCAGCTGTCTCTGTTGATCAA
TGTGTCGAACAGTTAGCAAGCAGGTACGATCCAAAATTTGGTGGATTTGGCTCTGCTCCC
AAGTTCCCAAGACCTGTTGAAGATTATATAATGCTCTATAAATTTCGCAAACACATGGAG
GCTGGGAAGGAGAGTGAAGCCTTGAACATAAAGAAGATGGTGACTCACACATTGGACTGT
ATGGCAAGAGGTGGAGTTCATGACCACGTAGGTGGTGGTTTTCACAGATATAGTGTGGAC
GAGTGCTGGCACATTCCACATTTTGAGAAGATGTTGTACGATCAGGGACAAATAGTAAAC
GTGTACCTGGATACATTTCTGATTACGGGAGACGAGTATTATTCTATAGTTGCACGTGAC
ATACTAGATTACTTGAGGAGAGACATGATAGGAAAAGAAGGTGAAATTTTCTCAGCAGAA
GATGCTGACAGTGCAGAATATGAAGGTGCTCCAAGAAAAAAGGAGGGGGCCTTTTATGTG
TGGACCAGTAAAGAGATCGAAGACACACTTGGGGAGAATGCAGAGCTATTCAAGAACCAT
TACTATGTTAAATCATCCGGCAATTGTGATCTTTCACCGATGAGTGATCCTCACAATGAG
TTCAGTTGTAAGAATGTGCTGATAGAAAGAAAACCAGCTTCTTCGATGGCATCGAAGTGT
GGAAAATCTCTTGATGAATATTCTCAAATCCTGGGGGATTGTCGGCAGAAGTTGTTTCAT
GTCCGGTCAAAAAGGCCAAGACCTCATTTGGATGATAAGGTTATTGTTTCCTGGAATGGG
CTAGCAATATCTGCTTTTGCAAGGGCTTCACAAATTCTGAAGTCAGGACCATCTGGAACT
TTATTCAATTTCCCTGTAACTGGATGCAATCCAGTTGAATATCTTGAAGTTGCAGAAAAT
GCGGCTAACTTTATAAAGGAAAAACTTTATGATGCAAGCTCAAAGAGGCTGCATCATAGC
TATCGCAATGGGCCATCCAAAGCACCAGGATTTTTAGATGATTATGCTTTCCTAATCAGT
GGCTTGCTGGATCTATACGAGTTTGGTGGAAAGACAGAGTGGCTTCTGTGGGCTGTCCAA
CTGCAAGTCACTCAGGATGATTTGTTTTTGGATAAACAAGGAGGTGGCTATTTTAATACT
CCTGGAGAAGACCCTTCTGTTCTCTTGCGTGTTAAAGAGGATTATGATGGTGCAGAACCT
TCTGGTAACTCAGTTGCAGCAATCAACTTGATCAGATTATCCAGTATATTTGATGTGTCA
AAATCTACTGGTTACAAGAGCAGTGTTGAACATCTATTGGCGGTCTTTGAGACCAGGCTA
CGACAACTTAGCATAGCGTTGCCTTTGATGTGTTGCGCAGCAGATATGCTCTCTGTTCCT
TCAAGGAAGCAGGTTGTGCTAGTGGGGCAGAAAGGATCTGAAGAATTTCAGGACATGGTA
GCAGCTACGTTTTCGTTATATGATCCGAATAGAACCGTGATCCAAATCGATCCTAGGAAC
ACAGAAGAAATGGAATTCTGGGATTGCAACAATGCAGACATTGCGCAAATGGCACGGAGC
AGCCCTCTGGGGGAACCAGCGGTGGCGCATGTGTGTCAGGACTTCAAGTGCAGCCCGCCG
GTAACCTCTCCTGGGGCGCTTCGCGAGCTGCTGAACAAGACACTGGTTGCTGCAAGTTCA
GCCTGA

Peptide Sequence

PEP ID

EES04178
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:72392722:72399764:-1 gene:SORBI_3003G418200 transcript:EES04178 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSSAASAPVFSHLLGPLPPPPPTPMLSTLLLRHRLAAAASSSPTHSTPLRLRALVVAAAA
MSSSSAPAPHGGRKPNRLAAEHSPYLLQHAHNPVDWYPWGDEAFQKARAKDVPIFLSIGY
STCHWCHVMEVESFENEEVAKLLNDWFVSIKVDREERPDVDKVYMTYVSALHGGGGWPLS
VFLSPDLKPLMGGTYFPPDDKYGRPGFKTVLRKVKEAWETKREALERSGNLVIEQLRDAL
STKASSQDVPNDLAAVSVDQCVEQLASRYDPKFGGFGSAPKFPRPVEDYIMLYKFRKHME
AGKESEALNIKKMVTHTLDCMARGGVHDHVGGGFHRYSVDECWHIPHFEKMLYDQGQIVN
VYLDTFLITGDEYYSIVARDILDYLRRDMIGKEGEIFSAEDADSAEYEGAPRKKEGAFYV
WTSKEIEDTLGENAELFKNHYYVKSSGNCDLSPMSDPHNEFSCKNVLIERKPASSMASKC
GKSLDEYSQILGDCRQKLFHVRSKRPRPHLDDKVIVSWNGLAISAFARASQILKSGPSGT
LFNFPVTGCNPVEYLEVAENAANFIKEKLYDASSKRLHHSYRNGPSKAPGFLDDYAFLIS
GLLDLYEFGGKTEWLLWAVQLQVTQDDLFLDKQGGGYFNTPGEDPSVLLRVKEDYDGAEP
SGNSVAAINLIRLSSIFDVSKSTGYKSSVEHLLAVFETRLRQLSIALPLMCCAADMLSVP
SRKQVVLVGQKGSEEFQDMVAATFSLYDPNRTVIQIDPRNTEEMEFWDCNNADIAQMARS
SPLGEPAVAHVCQDFKCSPPVTSPGALRELLNKTLVAASSA

Transcript Sequence

Transcript ID

EES04178
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:72392722:72399764:-1 gene:SORBI_3003G418200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACACAGTAGCAGCCGCGCGGGCCTTGCGGATGCCAGCGTGTGCCGAGGCCGAGCGGACAG
CGGAGGGCGGAGGCAGGCAGGTGTCGCTGGGCGCGCAGCCCACATGTCCTCCGCCGCTTC
CGCGCCGGTCTTCTCCCACCTTCTCGGCCCCCTCCCCCCTCCTCCTCCAACTCCAATGCT
CTCCACTCTCCTCCTCCGCCACCGCCTCGCCGCCGCTGCCTCCTCCTCGCCGACCCACAG
CACGCCTCTCCGTCTCCGCGCGCTCGTCGTCGCCGCCGCCGCCATGTCGTCGTCGTCCGC
GCCTGCGCCCCACGGCGGCCGGAAGCCGAACCGCCTCGCCGCCGAGCACAGCCCCTACCT
GCTGCAGCACGCGCACAACCCTGTTGATTGGTACCCTTGGGGGGACGAGGCTTTCCAGAA
GGCTCGCGCCAAGGACGTCCCCATCTTCCTCTCGATTGGCTATAGCACATGCCATTGGTG
TCATGTGATGGAGGTGGAGTCTTTTGAGAATGAGGAAGTGGCAAAGTTGCTGAATGATTG
GTTTGTTAGCATCAAGGTTGACCGTGAAGAGCGCCCAGATGTTGATAAGGTATACATGAC
ATATGTTTCGGCACTGCATGGTGGTGGTGGTTGGCCTTTGAGCGTCTTTTTGTCTCCTGA
CTTGAAACCACTGATGGGTGGTACGTACTTTCCACCGGATGATAAGTATGGAAGACCGGG
GTTCAAAACTGTATTGAGGAAGGTCAAGGAAGCCTGGGAAACTAAACGTGAAGCGCTTGA
GCGGTCGGGAAATCTTGTTATCGAACAATTAAGGGATGCATTATCTACTAAGGCTAGCTC
TCAAGATGTGCCGAATGATCTGGCAGCTGTCTCTGTTGATCAATGTGTCGAACAGTTAGC
AAGCAGGTACGATCCAAAATTTGGTGGATTTGGCTCTGCTCCCAAGTTCCCAAGACCTGT
TGAAGATTATATAATGCTCTATAAATTTCGCAAACACATGGAGGCTGGGAAGGAGAGTGA
AGCCTTGAACATAAAGAAGATGGTGACTCACACATTGGACTGTATGGCAAGAGGTGGAGT
TCATGACCACGTAGGTGGTGGTTTTCACAGATATAGTGTGGACGAGTGCTGGCACATTCC
ACATTTTGAGAAGATGTTGTACGATCAGGGACAAATAGTAAACGTGTACCTGGATACATT
TCTGATTACGGGAGACGAGTATTATTCTATAGTTGCACGTGACATACTAGATTACTTGAG
GAGAGACATGATAGGAAAAGAAGGTGAAATTTTCTCAGCAGAAGATGCTGACAGTGCAGA
ATATGAAGGTGCTCCAAGAAAAAAGGAGGGGGCCTTTTATGTGTGGACCAGTAAAGAGAT
CGAAGACACACTTGGGGAGAATGCAGAGCTATTCAAGAACCATTACTATGTTAAATCATC
CGGCAATTGTGATCTTTCACCGATGAGTGATCCTCACAATGAGTTCAGTTGTAAGAATGT
GCTGATAGAAAGAAAACCAGCTTCTTCGATGGCATCGAAGTGTGGAAAATCTCTTGATGA
ATATTCTCAAATCCTGGGGGATTGTCGGCAGAAGTTGTTTCATGTCCGGTCAAAAAGGCC
AAGACCTCATTTGGATGATAAGGTTATTGTTTCCTGGAATGGGCTAGCAATATCTGCTTT
TGCAAGGGCTTCACAAATTCTGAAGTCAGGACCATCTGGAACTTTATTCAATTTCCCTGT
AACTGGATGCAATCCAGTTGAATATCTTGAAGTTGCAGAAAATGCGGCTAACTTTATAAA
GGAAAAACTTTATGATGCAAGCTCAAAGAGGCTGCATCATAGCTATCGCAATGGGCCATC
CAAAGCACCAGGATTTTTAGATGATTATGCTTTCCTAATCAGTGGCTTGCTGGATCTATA
CGAGTTTGGTGGAAAGACAGAGTGGCTTCTGTGGGCTGTCCAACTGCAAGTCACTCAGGA
TGATTTGTTTTTGGATAAACAAGGAGGTGGCTATTTTAATACTCCTGGAGAAGACCCTTC
TGTTCTCTTGCGTGTTAAAGAGGATTATGATGGTGCAGAACCTTCTGGTAACTCAGTTGC
AGCAATCAACTTGATCAGATTATCCAGTATATTTGATGTGTCAAAATCTACTGGTTACAA
GAGCAGTGTTGAACATCTATTGGCGGTCTTTGAGACCAGGCTACGACAACTTAGCATAGC
GTTGCCTTTGATGTGTTGCGCAGCAGATATGCTCTCTGTTCCTTCAAGGAAGCAGGTTGT
GCTAGTGGGGCAGAAAGGATCTGAAGAATTTCAGGACATGGTAGCAGCTACGTTTTCGTT
ATATGATCCGAATAGAACCGTGATCCAAATCGATCCTAGGAACACAGAAGAAATGGAATT
CTGGGATTGCAACAATGCAGACATTGCGCAAATGGCACGGAGCAGCCCTCTGGGGGAACC
AGCGGTGGCGCATGTGTGTCAGGACTTCAAGTGCAGCCCGCCGGTAACCTCTCCTGGGGC
GCTTCGCGAGCTGCTGAACAAGACACTGGTTGCTGCAAGTTCAGCCTGAGGCATTTTGCC
GCCTCTGCTATGTTCGTAGATGTTACGATACCAATGTAGTAATAGTAACAAACCTGTGTA
GATATTTACATATGTGAGAAGTTCAAATATGTTTGTCAGTTAAGTTGTAGAGCCCGTTAA
AGCCTTCCCAGCTGTAGACATGTTCACAATAAAGCACGGAGCAAAATAAGATGTTTCATT
TAAT