Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES04172
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:72328869:72333246:-1 gene:SORBI_3003G417500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCGGGAGGCAGCAGCAGCCTCTCTTCTGTGAGCAACACGCCTAGGGAGGTGGAGGAG
AAGTTCTTGCAGTACCACATCCAGCCGCTCCTCGGTGGCCCGATGGAGATGCAAAACGGC
GGCGGCGGCGGCGACCTACAGCACGTCATCGGCGGCCCCTCGGAGCCGCTGCCGCCTGCA
CCGCCGCCGCCGACTGTGAAGAAGAAAAGAAGCCTTCCGGGGACACCAGACCCGAGCGCG
GAGGTGATCGCGCTGTCGCCGCGGACGCTGATGGCGACGAACCGGTTCGTGTGCGAGATC
TGCCACAAGGGTTTCCAGCGGGACCAGAACCTGCAGCTGCACCGGCGCGGGCACAACCTG
CCGTGGAAGCTGCGGCAGCGCGGCGGAGCCGGCGCGGACGGCCCTGGAGGCGGTCCGCCG
AGGAAGCGGGTGTACGTGTGCCCGGAGGCGTCGTGCGTGCACCACAACCCGGCGCGCGCG
CTGGGGGACCTGACGGGGATCAAGAAGCACTACTGCCGGAAGCACGGCGAGAAGAAGTGG
AAGTGCGAGCGCTGCGCCAAGCGCTACGCCGTGCACTCCGACTGGAAGGCGCACGCCAAG
GTCTGCGGCACCCGCGAGTACAAGTGCGACTGCGGCACCGTCTTCTCCAGGCGAGACAGC
TTCGTAACGCACAGGGCATTCTGCGACGCCCTAGCCCAGGAGAACAACAAGCTATCCCAG
CCCATGAACATGGCGACGGTGGCCTCTGCCCTCCAGGGTCAAGCCGCACCCCACCACCTG
GCGCCGCCATCGTCGTCGTCCCAGCCCGAAGACGACCTCGACGCCGCCGCCGGCGAGGAC
AACGACGACGACTTCGCCCTCGACACCAAGAGCCCGAAGCTGAGGATGCTCCCCACCATG
TCAGACGCCGACGCCACCGCCGCCAACCAGCTGCTCCTGCCGCCGCTGAGCATGGCCGGG
TGCATGCTCTCCAGCCTGCAGCACGGCGCCGCGAGGCCCGCGCCGCCGACACCGCCGTCG
CCGGCAACCTTCTTCAGCGGCGTAAAGGCAGGGCTCGACGGTCCCAGCAGCAGCTGCGAC
CCCAGCATGGGCGGCGCCTTCTCCCCGCCGGGCGCCTCGGCGAGCATGTCGGCCACGGCG
CTGCTGCAGAAGGCCGCGGAGATGGGCGCTACCGCGGGCGGGTACGGCGTGGGCGCGGGC
TTCTCCACCGTCGGATTCGGGCCCATGATAGGTGGGCCTCCCGTTATGGGCCCGTTTGGG
CCTCTAAAGACTCCTGCGGTGCTGGAGCCGTTCGATGGGCTGCCGTTCGGCCAGACGCAT
CTGGTGGGCCTCGACGTGGGCAGGCTCTTGCCCGGCCAGCACTTCTACGGCAGCAGCCAT
GGCCATGGCCATGGGGTCGGCTCCATGACCAGGGCCATCGGATCGCTGATGCACGGCGGC
CAGCAGATGGATCACCGGCGGCCGGACGACGTCCGCGTCGTGGATTACCTCGGCGTCGAC
GACCAGAGGAGCTGCTTCAGTGGTGTGAGCCCCTTTGGGCCCGACTTAGGCCCATGGTCC
TAG

Peptide Sequence

PEP ID

EES04172
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:72328869:72333246:-1 gene:SORBI_3003G417500 transcript:EES04172 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSGGSSSLSSVSNTPREVEEKFLQYHIQPLLGGPMEMQNGGGGGDLQHVIGGPSEPLPPA
PPPPTVKKKRSLPGTPDPSAEVIALSPRTLMATNRFVCEICHKGFQRDQNLQLHRRGHNL
PWKLRQRGGAGADGPGGGPPRKRVYVCPEASCVHHNPARALGDLTGIKKHYCRKHGEKKW
KCERCAKRYAVHSDWKAHAKVCGTREYKCDCGTVFSRRDSFVTHRAFCDALAQENNKLSQ
PMNMATVASALQGQAAPHHLAPPSSSSQPEDDLDAAAGEDNDDDFALDTKSPKLRMLPTM
SDADATAANQLLLPPLSMAGCMLSSLQHGAARPAPPTPPSPATFFSGVKAGLDGPSSSCD
PSMGGAFSPPGASASMSATALLQKAAEMGATAGGYGVGAGFSTVGFGPMIGGPPVMGPFG
PLKTPAVLEPFDGLPFGQTHLVGLDVGRLLPGQHFYGSSHGHGHGVGSMTRAIGSLMHGG
QQMDHRRPDDVRVVDYLGVDDQRSCFSGVSPFGPDLGPWS

Transcript Sequence

Transcript ID

EES04172
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:72328869:72333246:-1 gene:SORBI_3003G417500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCCCGCTGTCTGTCTCTCAGAGAACTGAAAGAACACACACTTCCAGCTCCTTCCCTCCCT
CCTCCCTCTCTCCAACAAACAAGAGTGTGTAGTATAGTTGTGAATTGTGATATGGTGTAG
AAGGTGTCTGTCTCTGTAGTCTGTACGTACTGCAATTTGTTGATCTCGCTAGCGCCGTAG
CGCGTGTGGCTTAATTGTGGTGCATGCATGCGTGTGTGCATGCAAGGTTAATTGCTTGCT
GTCATCAGCTGGATCCATGTCGGGAGGCAGCAGCAGCCTCTCTTCTGTGAGCAACACGCC
TAGGGAGGTGGAGGAGAAGTTCTTGCAGTACCACATCCAGCCGCTCCTCGGTGGCCCGAT
GGAGATGCAAAACGGCGGCGGCGGCGGCGACCTACAGCACGTCATCGGCGGCCCCTCGGA
GCCGCTGCCGCCTGCACCGCCGCCGCCGACTGTGAAGAAGAAAAGAAGCCTTCCGGGGAC
ACCAGACCCGAGCGCGGAGGTGATCGCGCTGTCGCCGCGGACGCTGATGGCGACGAACCG
GTTCGTGTGCGAGATCTGCCACAAGGGTTTCCAGCGGGACCAGAACCTGCAGCTGCACCG
GCGCGGGCACAACCTGCCGTGGAAGCTGCGGCAGCGCGGCGGAGCCGGCGCGGACGGCCC
TGGAGGCGGTCCGCCGAGGAAGCGGGTGTACGTGTGCCCGGAGGCGTCGTGCGTGCACCA
CAACCCGGCGCGCGCGCTGGGGGACCTGACGGGGATCAAGAAGCACTACTGCCGGAAGCA
CGGCGAGAAGAAGTGGAAGTGCGAGCGCTGCGCCAAGCGCTACGCCGTGCACTCCGACTG
GAAGGCGCACGCCAAGGTCTGCGGCACCCGCGAGTACAAGTGCGACTGCGGCACCGTCTT
CTCCAGGCGAGACAGCTTCGTAACGCACAGGGCATTCTGCGACGCCCTAGCCCAGGAGAA
CAACAAGCTATCCCAGCCCATGAACATGGCGACGGTGGCCTCTGCCCTCCAGGGTCAAGC
CGCACCCCACCACCTGGCGCCGCCATCGTCGTCGTCCCAGCCCGAAGACGACCTCGACGC
CGCCGCCGGCGAGGACAACGACGACGACTTCGCCCTCGACACCAAGAGCCCGAAGCTGAG
GATGCTCCCCACCATGTCAGACGCCGACGCCACCGCCGCCAACCAGCTGCTCCTGCCGCC
GCTGAGCATGGCCGGGTGCATGCTCTCCAGCCTGCAGCACGGCGCCGCGAGGCCCGCGCC
GCCGACACCGCCGTCGCCGGCAACCTTCTTCAGCGGCGTAAAGGCAGGGCTCGACGGTCC
CAGCAGCAGCTGCGACCCCAGCATGGGCGGCGCCTTCTCCCCGCCGGGCGCCTCGGCGAG
CATGTCGGCCACGGCGCTGCTGCAGAAGGCCGCGGAGATGGGCGCTACCGCGGGCGGGTA
CGGCGTGGGCGCGGGCTTCTCCACCGTCGGATTCGGGCCCATGATAGGTGGGCCTCCCGT
TATGGGCCCGTTTGGGCCTCTAAAGACTCCTGCGGTGCTGGAGCCGTTCGATGGGCTGCC
GTTCGGCCAGACGCATCTGGTGGGCCTCGACGTGGGCAGGCTCTTGCCCGGCCAGCACTT
CTACGGCAGCAGCCATGGCCATGGCCATGGGGTCGGCTCCATGACCAGGGCCATCGGATC
GCTGATGCACGGCGGCCAGCAGATGGATCACCGGCGGCCGGACGACGTCCGCGTCGTGGA
TTACCTCGGCGTCGACGACCAGAGGAGCTGCTTCAGTGGTGTGAGCCCCTTTGGGCCCGA
CTTAGGCCCATGGTCCTAGTATCTATATACCTTCTTGGGTCGTGCTTCAGTGGTTGTTGG
AGAATTAACTGGGCCGGCCCAGTAAGAGAGTGAGGGTATTTTTGTCAATCTAGTATCATC
GAGTCACTGGAACCGGAAAACCCTAACCCACAAATCACCCCCCCTATATAAACGACGGCT
TCCTCCCATCCTCAGCTGTGCCGCAATCCTATCTTTGGCTGCCGCAGCCACCGGAATCGT
CAGGTTTGTTCATCGATCGGCCGCCATGGGAGCACGATGGTCCATTTATCGCCTTTGATT
AAATTTCTTCTCTGTTTTGTTATTGGTTTTGGTTTCTTGCTTGATTGCTTGCGTTTGTCG
CTGGATGGATCTCGCTGAAGGCTGTGATGACCAAAAATACCTACCTATTTTCTGAATCCT
GACGATACGAACCAATGGATCCTTCTGAGCCTTTCAGGACCTGTCCGATTTCTCTTCTCT
TCTTGCTTTCGGTTTTCTCGCTTTTGTTTCGAATCTGTTGTCAGCAGTTACTTTTACAAA
TCAAAATAAGGCAGGATTTTGCCCTGTTGATGTGATGATAAACCTTGACAGAAGCTCGAG
TGTTGACCAAAAATTCAGACTACAATTATCTGATCAACCCCAAAAATCTTGGCTTTTGAT
GTGATTTGTATCTATCTATTTAGTTTTCAACCGAACGTTGTAGTTTGTTTTCAACCTGAT
GAAGATAACATGAGGTGCTGTGCAGTGTGATCCGTGCACAATAAGCCGATGCTCTGGATG
AAGAAAACAGGAAGGAAGCATGGTAGTGTGCACGGAGACGAACATGGTCTGCATGTCTGC
TCGCCTTGATGCCCTCGGGCTTTGATCTTGCGGGCCTGGATTCGACCTACACGCTCGCTC
GTTTAAAACTGTTAAAATAATGAGATTTTTTTTAAAATACATCACAAGTTTCTGAATGAT
TTTGAACGAGCAACGATTCAGGCAGCCCCTTTGTCCGATTCAATGGCAATGGAGGTGTTG
CGTTGCTCGGAGAAGAAATCTTTTGGTCTTCAGATCAGCTGAGGGGCGAGGTTTCCTCCC
CTCGTTGAGGCTGGTCTAGTAAGTCTTAAGAACATTTGGCTGAAAGTGCTCAACCAAGCA
CATTTTGCGAGTCCATTTTTGCGAGAAAAGGTATGGGTTTCGCTATAATAGAATTCTAAA
CATCTGCATCGCTGTAACGACTCTCGAAACATTAACACTTTGCTATTATAACATCGTGGC
CTTCAAATAGACAAATTGAACTCAAATATCTTTAAATTCAAATATTTTCATTTAATCACA
GAACTGTCATTCTGCTATACCTCTTCACCACGGGACCTTTCAGTTGCTAGCCGTGACCTA
CTGGTTTCCCGACGCAAGAGACCGGCACCCTCCCTCCTTCCCACAGGCAGGCAGCAGCGC
CGGCCAGGCAGCAGCAGCCGCCGCTCTAAGGGCAGTTCTGTGATTAAATAAAAATATTTG
AATTTGAAGAGATTTGAGTTCAATTTGTCTATTTAAAGGTCATGATGTTATAATAGCGAA
GTGTCAATGTTTCGAGAGTCGTTATAGCGAAGCAGATGTTTAGAATCCTATTATAGCGAA
ACCCACACGTTTGGCATCCTATAATAGCAAATTTCTCCATTTTTGCTATTTAAGTTTGAA
TAAGTG