Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES04065
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:70491179:70496664:-1 gene:SORBI_3003G394100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCGATGGAAGCCGCCGCCGACGCTATGCTCGCCGCCGCAAGCCGCGCCTTCACG
AGCACCTTCGCCATCGCCATTCAGATCCAGGGGTGCTGTATCTGTTTAGTTCTTGCTCTT
GGGTGGGCGGCTGCTTCAATCGTCAGAAAAAGGGTTATAAAGAACATGAGGCGGAACATT
GTAGATGGAAATAGTTTTGCTTTTCTTTGTGACAACATAGATGAGCTTGAGCACTCTGTT
CAGGAGAATTTACCTAGAGTCTCTGTAATTATGCCTTTGAAGGGCTTTGGCGAACATAAT
TTGCAAAATTGGCGAACTCAGATTACATCACTTTATGGGGGGCCACTAGAATTCCTGTTT
ATCGTAGAGAGCAAAGACGATCCAGCTTATCATGCTGTTTCCCGTTTGATCGCAGAGTAC
AAGGACCATCTAGAGGCGAAGGTGGTTGTGGCTGGGTTGTCAACAACCTGTAGCCAGAAA
ATTCACAATCAATTGATTGGTGTTAAAAAGATGCACAAGGATACCAAGTATGTCTTGTTT
CTTGACGATGATGTGAGGCTGCATCCTGGGACTATCAGAGCTCTCACAAAAGAAATGGAG
AAGAATCCTGAGATATTTATACAAACTGGATATCCCCTTGACTTACCTTCTGGCAGTTTG
GGCAGCTATTGCATATATGAATACCACATGCCTTGCTCGATGGGATTTGCAACTGGTGGG
AAGACTTTCTTCTTGTGGGGTGGCTGTATGATGATGCATGCTGATGATTTTAGGCAAGAC
CGATATGGTGTTGTCAGTGGATTAAGAGATGGTGGTTACTCAGATGATATGACACTCGCT
GCAATAGCAGGACAGCACAAAAGGCTCATATCTTCACCTCCTGTTGCTGTGTTTCCACAC
CCTCTTGCCAGTGATCTTAGCTTCTCCAGATACTGGAATTACCTCAGGAAACAAACTTTT
GTTCTTGAGTCATATGTATCGAATGTCAACTGGATGATGAACCGTGCATTATTTACAAGT
CATTGTTATCTGTCATGGGGGTTTGTCTGGCCATATATTATGGCTTTGGTCCATGTTTTA
GCTGCTCTTCGAGCACCGTACAGCGAAGTTGTAAAGGAAGCGTCCGATTCATCTTGGGGA
TTGTTCCTAGTGAGCCTCTTGTTCATATGCACTCTCACCGAGCTTGTTTCAATGTGGAAT
TTGACCAAGGTGGAAATTCAACTGTGCAATATGCTGTCTCCTGAAGGACCGAAAGTATCT
CTTGATTCATACAATTGGGGGCTTGTGTTCATTGCTGTGTTGGTAGACAATTTCCTCTAT
CCAGTATCTGCATTCAGATCACATTTCTCCCAATCAATCAATTGGTCTGGTATCCGATAC
TACTTGAGAGATGGGAAAATAAGCAAGATCGAAAGAGAGAACAGTTCAAAGTACACTGAT
CTTGGAGGGAAGCATCTATATGGCAAGAGGACATACCCTTCTAATAAATCATTGCTTGGT
TACCTGTCAAGAACTCTAGTGCAATGGCATCAGCCAAAGAAATATGACGTATAG

Peptide Sequence

PEP ID

EES04065
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:70491179:70496664:-1 gene:SORBI_3003G394100 transcript:EES04065 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAMEAAADAMLAAASRAFTSTFAIAIQIQGCCICLVLALGWAAASIVRKRVIKNMRRNI
VDGNSFAFLCDNIDELEHSVQENLPRVSVIMPLKGFGEHNLQNWRTQITSLYGGPLEFLF
IVESKDDPAYHAVSRLIAEYKDHLEAKVVVAGLSTTCSQKIHNQLIGVKKMHKDTKYVLF
LDDDVRLHPGTIRALTKEMEKNPEIFIQTGYPLDLPSGSLGSYCIYEYHMPCSMGFATGG
KTFFLWGGCMMMHADDFRQDRYGVVSGLRDGGYSDDMTLAAIAGQHKRLISSPPVAVFPH
PLASDLSFSRYWNYLRKQTFVLESYVSNVNWMMNRALFTSHCYLSWGFVWPYIMALVHVL
AALRAPYSEVVKEASDSSWGLFLVSLLFICTLTELVSMWNLTKVEIQLCNMLSPEGPKVS
LDSYNWGLVFIAVLVDNFLYPVSAFRSHFSQSINWSGIRYYLRDGKISKIERENSSKYTD
LGGKHLYGKRTYPSNKSLLGYLSRTLVQWHQPKKYDV

Transcript Sequence

Transcript ID

EES04065
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:70491179:70496664:-1 gene:SORBI_3003G394100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CAAAGGCCACCCAGCCAGCCCAAATCAACCCCCTTCCTCCCCCACTCCCTTCTCCCTCCT
CCCTCCTCCCCCACATCGGCCAGACTCTACTCACCGCCCAGGTCAGGTCAGGCCAGGCCC
GGCGGTAGAGAGATCCGGCGAGAGACGCGGCCTCTTGCTCCCCCACCCCTCTCCAGAAGC
GCCTAGAAGCTTCGGAAGGTGCCTCGCCGCGGCTCGAAGGAGGGGAGGGGACGCCGCGGG
CAATGGCGGCGATGGAAGCCGCCGCCGACGCTATGCTCGCCGCCGCAAGCCGCGCCTTCA
CGAGCACCTTCGCCATCGCCATTCAGATCCAGGGGTGCTGTATCTGTTTAGTTCTTGCTC
TTGGGTGGGCGGCTGCTTCAATCGTCAGAAAAAGGGTTATAAAGAACATGAGGCGGAACA
TTGTAGATGGAAATAGTTTTGCTTTTCTTTGTGACAACATAGATGAGCTTGAGCACTCTG
TTCAGGAGAATTTACCTAGAGTCTCTGTAATTATGCCTTTGAAGGGCTTTGGCGAACATA
ATTTGCAAAATTGGCGAACTCAGATTACATCACTTTATGGGGGGCCACTAGAATTCCTGT
TTATCGTAGAGAGCAAAGACGATCCAGCTTATCATGCTGTTTCCCGTTTGATCGCAGAGT
ACAAGGACCATCTAGAGGCGAAGGTGGTTGTGGCTGGGTTGTCAACAACCTGTAGCCAGA
AAATTCACAATCAATTGATTGGTGTTAAAAAGATGCACAAGGATACCAAGTATGTCTTGT
TTCTTGACGATGATGTGAGGCTGCATCCTGGGACTATCAGAGCTCTCACAAAAGAAATGG
AGAAGAATCCTGAGATATTTATACAAACTGGATATCCCCTTGACTTACCTTCTGGCAGTT
TGGGCAGCTATTGCATATATGAATACCACATGCCTTGCTCGATGGGATTTGCAACTGGTG
GGAAGACTTTCTTCTTGTGGGGTGGCTGTATGATGATGCATGCTGATGATTTTAGGCAAG
ACCGATATGGTGTTGTCAGTGGATTAAGAGATGGTGGTTACTCAGATGATATGACACTCG
CTGCAATAGCAGGACAGCACAAAAGGCTCATATCTTCACCTCCTGTTGCTGTGTTTCCAC
ACCCTCTTGCCAGTGATCTTAGCTTCTCCAGATACTGGAATTACCTCAGGAAACAAACTT
TTGTTCTTGAGTCATATGTATCGAATGTCAACTGGATGATGAACCGTGCATTATTTACAA
GTCATTGTTATCTGTCATGGGGGTTTGTCTGGCCATATATTATGGCTTTGGTCCATGTTT
TAGCTGCTCTTCGAGCACCGTACAGCGAAGTTGTAAAGGAAGCGTCCGATTCATCTTGGG
GATTGTTCCTAGTGAGCCTCTTGTTCATATGCACTCTCACCGAGCTTGTTTCAATGTGGA
ATTTGACCAAGGTGGAAATTCAACTGTGCAATATGCTGTCTCCTGAAGGACCGAAAGTAT
CTCTTGATTCATACAATTGGGGGCTTGTGTTCATTGCTGTGTTGGTAGACAATTTCCTCT
ATCCAGTATCTGCATTCAGATCACATTTCTCCCAATCAATCAATTGGTCTGGTATCCGAT
ACTACTTGAGAGATGGGAAAATAAGCAAGATCGAAAGAGAGAACAGTTCAAAGTACACTG
ATCTTGGAGGGAAGCATCTATATGGCAAGAGGACATACCCTTCTAATAAATCATTGCTTG
GTTACCTGTCAAGAACTCTAGTGCAATGGCATCAGCCAAAGAAATATGACGTATAGGAAG
GCCAACCAGGGATTCAGCCCTCGATTTGGCGGGGCTTCTTGTTGTACACCCTCTTTTGTT
TTTATCTTGCCTGCCTGCCTCCCCCCTTCTCTGATTGTTTATTGGTTATTAGGTTCATTC
ATATTAAATTTTGTGGTGTCCAATCGGCGCCACTGCAAAGGGTTGCACCTCATAGTTCTT
GTAACAGTATAGATATGTAATGGTCTCGCTGAAGAAGTGAAATGTTCCATATTGGTGAGA
TGGTCTCTTCGGTTCATTTGC