Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES03895
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:67639289:67642804:-1 gene:SORBI_3003G358900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACGCCTCCCGGCCAACTGCTCCCCTTGGCCCGGCCGCCTCCGCCGCCTCCCGTCCTA
TCCAGCCGCCGCAGCCGGTGCCCGCCTCCCGCCCACGCGCACGCCGGAGACTCGCCTCTG
CCTCCATGGCGGGCCCACCGCCTCCATGGCCGCTTCATGCCTTCTCCCCAGCTGTTCCGG
GCTCCAGCCTGGCCCCCTCGTGCCCCGACATCTCCAGGGGTTTCGGCCGCCGCAGGTGGC
GAGGCTCAGGCGGCTGCGGTGGCGGAGTTCGTGACGTCGGAGAGGGTGAAGGTGGCGGCG
ATGCTGGGGCTAGCCCTCGCGCTCTGCAACGCCGACCGCGTCGTCATGTCCGTCGCCATC
GTCCCTCTCTCGCAGGCGTACGGGTGGACCCCGTCATTCGCCGGCGTCGTGCAGTCATCC
TTTCTTTGGGGATATCTGATGTCGCCGATAATTGGTGGAGCGCTTGTTGACTACTATGGT
GGAAAACGAGTCATGGCTTACGGTGTAGCCTTATGGTCCTTGGCTACATTCCTGTCTCCC
TGGGCAGCTGGTCGATCTATCTGGTTGTTTCTCTTTACCAGAGTCCTGCTGGGTATTGCA
GAAGGAGTGGCACTCCCAAGCATGAACAACATGGTGTTGAGGTGGTTTCCTCGTACAGAG
AGATCTAGTGCTGTGGGTATTGCAATGGCTGGCTTTCAGCTTGGCAATGCCATTGGGTTA
CTTCTTTCCCCAATTATCATGTCACGAACTGGAATCTTTGGACCTTTTGCGATATTTGGA
TTATTTGGATTTCTGTGGGTGTTGGTGTGGATACCAGCTATATCTGGCACACCAAGTGAA
CATGCACAGATATCAGCATATGAACTGGAATATATAACCAAAGGTCAGAAATTGGTGAAA
CCTCAAATTGGAAGTGAAAAAACGAAAAAGGTTCCCCCTTTGAGTAAACTGCTTTCCAAA
TGGCCAACATGGGCTTTGATTTGTGCAAACGCCATGCATAGCTGGGGTTATTTTGTTATT
CTTTCATGGATGCCAGTCTATTTTAAAACAATATATCATGTCAATCTGAGAGAAGCTGCT
TGGTTCAGTGCACTCCCTTGGGTGATGATGGCAGTTTTAGGCTATGTGGCTGGTGTTGTA
TCGGACATGCTTATTAGAAATGGTACAAACATTACTTTAACACGGAAGATAATGCAGTCA
ATTGGCTTTCTGGGGCCAGGTATTGCTTTGCTCTGTCTGAATGCAGCAAAGAGTCCAATC
ATTGCTTCAGCCTGGCTTACAATTGCTGTTGGTTTGAAATCCTTCGGCCACTCAGGTTTC
TTAGTAAATCTACAGGAGATTGCCCCACAATATGCTGGAGTCCTACACGGAATGTCAAAT
ACAGCTGGGACATTTGCTGCCATTCTAGGAACTATTGGAGCAGGATTTTTTGTTGATCAG
ATGGGTTCTTTCCGTGGATTTTTGATATTGACGTCGGTTTTATACTTCAGCAGTGCTATT
TTCTGGGATATCTTTGCTACTGGAGAGCGTGTTGATTTTGATGGCACTGGCTAG

Peptide Sequence

PEP ID

EES03895
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:67639289:67642804:-1 gene:SORBI_3003G358900 transcript:EES03895 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTPPGQLLPLARPPPPPPVLSSRRSRCPPPAHAHAGDSPLPPWRAHRLHGRFMPSPQLFR
APAWPPRAPTSPGVSAAAGGEAQAAAVAEFVTSERVKVAAMLGLALALCNADRVVMSVAI
VPLSQAYGWTPSFAGVVQSSFLWGYLMSPIIGGALVDYYGGKRVMAYGVALWSLATFLSP
WAAGRSIWLFLFTRVLLGIAEGVALPSMNNMVLRWFPRTERSSAVGIAMAGFQLGNAIGL
LLSPIIMSRTGIFGPFAIFGLFGFLWVLVWIPAISGTPSEHAQISAYELEYITKGQKLVK
PQIGSEKTKKVPPLSKLLSKWPTWALICANAMHSWGYFVILSWMPVYFKTIYHVNLREAA
WFSALPWVMMAVLGYVAGVVSDMLIRNGTNITLTRKIMQSIGFLGPGIALLCLNAAKSPI
IASAWLTIAVGLKSFGHSGFLVNLQEIAPQYAGVLHGMSNTAGTFAAILGTIGAGFFVDQ
MGSFRGFLILTSVLYFSSAIFWDIFATGERVDFDGTG

Transcript Sequence

Transcript ID

EES03895
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:67639289:67642804:-1 gene:SORBI_3003G358900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACGTCACTCCCACCAACCCACTTCAGCAGGATGCCAGGATCAGTTCCACTCCGCGGCTCC
CCCTTGCCCCGTGACTCCGCGACGGAGAAGAGAAACCATGACGCCTCCCGGCCAACTGCT
CCCCTTGGCCCGGCCGCCTCCGCCGCCTCCCGTCCTATCCAGCCGCCGCAGCCGGTGCCC
GCCTCCCGCCCACGCGCACGCCGGAGACTCGCCTCTGCCTCCATGGCGGGCCCACCGCCT
CCATGGCCGCTTCATGCCTTCTCCCCAGCTGTTCCGGGCTCCAGCCTGGCCCCCTCGTGC
CCCGACATCTCCAGGGGTTTCGGCCGCCGCAGGTGGCGAGGCTCAGGCGGCTGCGGTGGC
GGAGTTCGTGACGTCGGAGAGGGTGAAGGTGGCGGCGATGCTGGGGCTAGCCCTCGCGCT
CTGCAACGCCGACCGCGTCGTCATGTCCGTCGCCATCGTCCCTCTCTCGCAGGCGTACGG
GTGGACCCCGTCATTCGCCGGCGTCGTGCAGTCATCCTTTCTTTGGGGATATCTGATGTC
GCCGATAATTGGTGGAGCGCTTGTTGACTACTATGGTGGAAAACGAGTCATGGCTTACGG
TGTAGCCTTATGGTCCTTGGCTACATTCCTGTCTCCCTGGGCAGCTGGTCGATCTATCTG
GTTGTTTCTCTTTACCAGAGTCCTGCTGGGTATTGCAGAAGGAGTGGCACTCCCAAGCAT
GAACAACATGGTGTTGAGGTGGTTTCCTCGTACAGAGAGATCTAGTGCTGTGGGTATTGC
AATGGCTGGCTTTCAGCTTGGCAATGCCATTGGGTTACTTCTTTCCCCAATTATCATGTC
ACGAACTGGAATCTTTGGACCTTTTGCGATATTTGGATTATTTGGATTTCTGTGGGTGTT
GGTGTGGATACCAGCTATATCTGGCACACCAAGTGAACATGCACAGATATCAGCATATGA
ACTGGAATATATAACCAAAGGTCAGAAATTGGTGAAACCTCAAATTGGAAGTGAAAAAAC
GAAAAAGGTTCCCCCTTTGAGTAAACTGCTTTCCAAATGGCCAACATGGGCTTTGATTTG
TGCAAACGCCATGCATAGCTGGGGTTATTTTGTTATTCTTTCATGGATGCCAGTCTATTT
TAAAACAATATATCATGTCAATCTGAGAGAAGCTGCTTGGTTCAGTGCACTCCCTTGGGT
GATGATGGCAGTTTTAGGCTATGTGGCTGGTGTTGTATCGGACATGCTTATTAGAAATGG
TACAAACATTACTTTAACACGGAAGATAATGCAGTCAATTGGCTTTCTGGGGCCAGGTAT
TGCTTTGCTCTGTCTGAATGCAGCAAAGAGTCCAATCATTGCTTCAGCCTGGCTTACAAT
TGCTGTTGGTTTGAAATCCTTCGGCCACTCAGGTTTCTTAGTAAATCTACAGGAGATTGC
CCCACAATATGCTGGAGTCCTACACGGAATGTCAAATACAGCTGGGACATTTGCTGCCAT
TCTAGGAACTATTGGAGCAGGATTTTTTGTTGATCAGATGGGTTCTTTCCGTGGATTTTT
GATATTGACGTCGGTTTTATACTTCAGCAGTGCTATTTTCTGGGATATCTTTGCTACTGG
AGAGCGTGTTGATTTTGATGGCACTGGCTAGTAACTCAGAGGAACTCTGCGGTTTTCTAT
CCTTAAAACACAGAATGCTGATTCAGGACAGTGTTTTACTGCCAACCATCAGAAAGTTAT
TTGCACCTGAAGATGAAGAACTGTACAGTATTGGGTTTCAACCTTTTAAAGCACGCAGTG
AGTTTATCCTGGAAGTAGAATATCAGAGATGGATAGACACATGGAACCGTCTTTTCTTGG
AGGGATAACCCTGATGATGTAACATAGAATAAATAACAGGGCAGGATGCCACCCAGTAAT
GGCGCTGAAAGTAGTAGAAAACTGAGAACTGAAGACTGAAACTGATTCGAAGGCTAGATA
GAAAATGGGAATCCCAACCATTAAGGGAGCATGGGTTTGGAAAACATGGGGAATTTGGGT
GTAAATGCTACGGAAAGTTGTGGCCTTTTTAAAATTGTTATGACTTGTGACTTTTTTATT
ACTGTCAATTTCCCTTCTTTTAAGTATATATAATGAATGCAGCAAAACAGGAAAATCCTT
GATGGGGAGCATAGAAGGGTCTTTACATTGATGAAAAAAATTGTAAACTTCAGATGCAAT
ACTATTCAGTATTGAGAATGTCAGCATACCATACATCGATGTCTGTAGAGATGCAATACT
AATGAAGATGTAAGTGGACATCCAATGGTGCTTT