Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES03866
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:67166655:67170817:-1 gene:SORBI_3003G352700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCAATCTCCTCTGCTCTTCCCTGCTCCCTCCTCATGGCGGCCCTGATGCTCCTCGCC
TCTGCCGTCGAAGTGCAAGGCATCACGAGGCACTACGACTTCAATGTGACAATGGCGAAC
GTGACACGGCTGTGCGCCAGCAAGAGCATCATCACGGTGAACGGGCAGTTCCCCGGCCCC
AAGATCGTCGCGAGGGAAGGCGACCGCCTCGTCATCCGCGTGACCAACCACGCCCAGCAC
AACATCTCGCTGCACTGGCACGGCATCCGGCAGCTGCGCACGGGGTGGGCGGACGGGCCG
GCGTACATCACGCAGTGCCCGATCCAGACGGGGCAGAGCTACGTGTACAACTACACCATC
GTCGGGCAGCGCGGCACGCTGTGGTGGCACGCGCACATCTCCTGGCTGCGCGCCACCGTC
TACGGGCCCCTCGTCGTCCTGCCCAAGCTCGGCGTCCCCTACCCGTTCCCGGCGCCGTAC
AAGGAGGTCCCCGTCATCTTCGGTGAGTGGTGGCTGGCGGACACGGAGGTGGTGATCCAG
CAGGCGCTTCAGCTCGGCGCTGGTCCGAATGTCTCTGACGCCCACACCATCAACGGCCTA
CCAGGACCGCTCTACAACTGCTCTGCCAAAGACACGTTCAAGCTGAAGGTGAAGCCAGGG
AAGACGTACATGCTCCGCCTCATCAACGCGGCGCTCAACGACGAGCTCTTTTTCTCCATC
GCCAACCACTCGCTCACCGTCGTTGAGGTCGACGCCGTCTACGTCAAGCCCTTCACCGTC
GACACCCTGGTGATCGCCCCGGGCCAGACCACCAACGTGCTCCTCGCCGCGAAGCCGTTC
TACCCGGCCGCCAACTACTACATGACCGCCAGGACCTACTCCACCGGCCGGCCGGCCACC
TTCGACAACACCACCGTCGCCGGCATCCTCGAGTACGAGTACCCCGACGCGCCCTCCGCC
GCGGCGAGCTTCAACAAGGCCCTGCCGCTCTACAGGCCGGCGCTGCCGCAGCTCAACGAC
ACCAGCTTCGTCGGCAACTTCACGGCCAAGCTCCTCAGCCTCGCGACGCCGGAGTACCCG
GCGGCGGTGCCGCAGACGGTGGACAAGCGGTTCTTCTTCACGGTGGGGCTGGGCACGCAC
CCGTGCCCGGCCAACACCACGTGCCAGGGCCCCACCAACACGACGCAGTTCGCGGCGTCC
GTGAACAACGTCTCCTTCGTGCTCCCGACCAAGGCGCTGCTGCACTCGCACTTCGCCGGC
CTGTCCAGCGGCGTCTACGAGTCGGACTTCCCCGTGGCGCCGCTGGCGCCGTTCAACTAC
ACGGGGACGCCGCCCAACAACACCAACGTGGCCAACGGGACCAAGCTGATGGTCATCCCG
TACGGCACCAACGTGGAGCTGGTGATGCAGGGCACCAGCATCCTCGGCATCGAGAGCCAC
CCGCTGCACCTGCACGGATTCAACTTCTTCGTCGTCGGCCAAGGCTACGGCAACTACGAC
CCGGTGAACGACCCGCCCAAGTTCAACCTCGTCGACCCCGTCGAGCGCAACACCGTCGGC
GTGCCGGCCGGCGGCTGGGTGGCCATACGCTTCCTTGCCGACAACCCCGGGGTATGGTTC
ATGCATTGCCATTTGGAGGTGCACACAACATGGGGCCTCAGGATGGCATGGTTGGTGCTT
GACGGCAGCCTCCCGCACCAGAAGCTGCTCCCGCCGCCGTCCGATCTTCCCAAATGCTGA

Peptide Sequence

PEP ID

EES03866
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:67166655:67170817:-1 gene:SORBI_3003G352700 transcript:EES03866 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAISSALPCSLLMAALMLLASAVEVQGITRHYDFNVTMANVTRLCASKSIITVNGQFPGP
KIVAREGDRLVIRVTNHAQHNISLHWHGIRQLRTGWADGPAYITQCPIQTGQSYVYNYTI
VGQRGTLWWHAHISWLRATVYGPLVVLPKLGVPYPFPAPYKEVPVIFGEWWLADTEVVIQ
QALQLGAGPNVSDAHTINGLPGPLYNCSAKDTFKLKVKPGKTYMLRLINAALNDELFFSI
ANHSLTVVEVDAVYVKPFTVDTLVIAPGQTTNVLLAAKPFYPAANYYMTARTYSTGRPAT
FDNTTVAGILEYEYPDAPSAAASFNKALPLYRPALPQLNDTSFVGNFTAKLLSLATPEYP
AAVPQTVDKRFFFTVGLGTHPCPANTTCQGPTNTTQFAASVNNVSFVLPTKALLHSHFAG
LSSGVYESDFPVAPLAPFNYTGTPPNNTNVANGTKLMVIPYGTNVELVMQGTSILGIESH
PLHLHGFNFFVVGQGYGNYDPVNDPPKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWF
MHCHLEVHTTWGLRMAWLVLDGSLPHQKLLPPPSDLPKC

Transcript Sequence

Transcript ID

EES03866
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:67166655:67170817:-1 gene:SORBI_3003G352700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGATCGTTGCCGCATACTTTGGCCACACTCTAAAGCTAGAGCCCTCCAGCAGTCCAGCTA
GCTCTCGAGCAGCTCGCCTGCCTGCCCTTGATCGTTCATCTACCGGATCACCAAACTTTT
TATAGTTCTGCCCAAGCTGCGTTTCTGTCGACCATGTAGAAAGCCTAAGAAAATGGCGGT
GGTAGTTGACATACTACTAGCACATTGCTTGCCATGCCCTATATATGGAGAGGGGCCTCT
GGTGGCTGTCCCAACGCACACACACAAACACATTATTCCTCCATCTCCTCGATCGCCTGG
CCGGCCGTCTTGGTTGCCCTCTAGAGCTCGAGAGCAACTCAAGATATAGCTAGCTAGCTG
CTCATCGGAGTCTAGCTAGAGGTTTAACCATCAGCTAGCTAGCTGGCCATGGCAATCTCC
TCTGCTCTTCCCTGCTCCCTCCTCATGGCGGCCCTGATGCTCCTCGCCTCTGCCGTCGAA
GTGCAAGGCATCACGAGGCACTACGACTTCAATGTGACAATGGCGAACGTGACACGGCTG
TGCGCCAGCAAGAGCATCATCACGGTGAACGGGCAGTTCCCCGGCCCCAAGATCGTCGCG
AGGGAAGGCGACCGCCTCGTCATCCGCGTGACCAACCACGCCCAGCACAACATCTCGCTG
CACTGGCACGGCATCCGGCAGCTGCGCACGGGGTGGGCGGACGGGCCGGCGTACATCACG
CAGTGCCCGATCCAGACGGGGCAGAGCTACGTGTACAACTACACCATCGTCGGGCAGCGC
GGCACGCTGTGGTGGCACGCGCACATCTCCTGGCTGCGCGCCACCGTCTACGGGCCCCTC
GTCGTCCTGCCCAAGCTCGGCGTCCCCTACCCGTTCCCGGCGCCGTACAAGGAGGTCCCC
GTCATCTTCGGTGAGTGGTGGCTGGCGGACACGGAGGTGGTGATCCAGCAGGCGCTTCAG
CTCGGCGCTGGTCCGAATGTCTCTGACGCCCACACCATCAACGGCCTACCAGGACCGCTC
TACAACTGCTCTGCCAAAGACACGTTCAAGCTGAAGGTGAAGCCAGGGAAGACGTACATG
CTCCGCCTCATCAACGCGGCGCTCAACGACGAGCTCTTTTTCTCCATCGCCAACCACTCG
CTCACCGTCGTTGAGGTCGACGCCGTCTACGTCAAGCCCTTCACCGTCGACACCCTGGTG
ATCGCCCCGGGCCAGACCACCAACGTGCTCCTCGCCGCGAAGCCGTTCTACCCGGCCGCC
AACTACTACATGACCGCCAGGACCTACTCCACCGGCCGGCCGGCCACCTTCGACAACACC
ACCGTCGCCGGCATCCTCGAGTACGAGTACCCCGACGCGCCCTCCGCCGCGGCGAGCTTC
AACAAGGCCCTGCCGCTCTACAGGCCGGCGCTGCCGCAGCTCAACGACACCAGCTTCGTC
GGCAACTTCACGGCCAAGCTCCTCAGCCTCGCGACGCCGGAGTACCCGGCGGCGGTGCCG
CAGACGGTGGACAAGCGGTTCTTCTTCACGGTGGGGCTGGGCACGCACCCGTGCCCGGCC
AACACCACGTGCCAGGGCCCCACCAACACGACGCAGTTCGCGGCGTCCGTGAACAACGTC
TCCTTCGTGCTCCCGACCAAGGCGCTGCTGCACTCGCACTTCGCCGGCCTGTCCAGCGGC
GTCTACGAGTCGGACTTCCCCGTGGCGCCGCTGGCGCCGTTCAACTACACGGGGACGCCG
CCCAACAACACCAACGTGGCCAACGGGACCAAGCTGATGGTCATCCCGTACGGCACCAAC
GTGGAGCTGGTGATGCAGGGCACCAGCATCCTCGGCATCGAGAGCCACCCGCTGCACCTG
CACGGATTCAACTTCTTCGTCGTCGGCCAAGGCTACGGCAACTACGACCCGGTGAACGAC
CCGCCCAAGTTCAACCTCGTCGACCCCGTCGAGCGCAACACCGTCGGCGTGCCGGCCGGC
GGCTGGGTGGCCATACGCTTCCTTGCCGACAACCCCGGGGTATGGTTCATGCATTGCCAT
TTGGAGGTGCACACAACATGGGGCCTCAGGATGGCATGGTTGGTGCTTGACGGCAGCCTC
CCGCACCAGAAGCTGCTCCCGCCGCCGTCCGATCTTCCCAAATGCTGATTAGACTCCCTC
CCTCAGCTCTCTATCTCTCTCCTGCGCCGGTCGCTTCAAAGGGAATTGTGAATTAGACTT
GATCACAAATGTTGATTTTTTGTTTGTTTACTTTCTTCATTGCCAATTGCAATTCTTTCA
GCTTCCATTTAAACTAGTCCGTTCCTAGCTGACCTGGACTTTTTGTAATCTTTTCTTCTA
TTTGTTTGCCACCCTCTGTAATGACAAAATGTTTTTGGGAGAATAAAGAATGGCGTGACT
TGCACCAGATCCATAGAATT