Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES03848
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:66881410:66885198:-1 gene:SORBI_3003G348400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCGCTCGAGATCCACGAGGAGGATGGTGGGGCGTCTGGTGCACGCCCGGCGAAGGTG
ATGTCTGTTTCGGGGAGCGGGAAGCGGGGCCGGTACGTGCGGCAGGTGACGGGGCGGCAC
AACGACACCGACATCCACGTGGCCGCGCGGGGCGGGGACGCCGTGGCGCTACGCCGCGCG
CTGTCTGTGGCCGCGGCGGCCGTGGCCGCCACGGGGGAGGGACCCGAGGACCTCGAGGCG
GCGCGGCGCGCGGTGGCCGCAGAGCCCAACGAGGCCGGGGAGACGCCGCTCGTCGCCGCC
GCGGAGAGGGGCCACCTCGAGGTGGTGGTGGAGCTGCTGCGGCACCTCGACGCCGAGGGC
CTGGCCGCGAAGAACAGGTCCGGGTACGACGCGCTGCACGTCGCTGCCAGAGAAGGGCGT
CATGCTGTTGTGCAGGAAATGTTACATCATGATAGGATGCTTGCCAAAACATTTGGCCCT
GCAAATACTACTCCACTTATATCAGCAGCTATGAGGGGCCATATTGAAGTTGTTGAACTG
TTGCTGGAACAAGATGACTTTGGATTGGTGGAAATGGCCAGAGATAATGGAAAAAATGCC
TTACATTTTGCTGCTCGACAGGGACATATTGGAATTGTCAAAGCGCTACTTGAGAAGGAT
CCTCAGTTAGCAAGAAGAAATGACAAGAAAGGTCAAACAGCTCTTCATATGGCCGTAAAG
GGAACAAGCTGTGATGTTCTTAGAGCCCTAGTGGATGCTGATCCAGCAATTGTAATGCTA
CCAGATAAAAATGGGAACACAGCTTTGCATGTTGCAACAAGAAAAAAAAGAGCAGAGATA
GTTAGTGTTCTTTTGCGGCTACCAGATACCCATGTCAATGCACTGAACAGAGACCACAAG
ACTGCCTTTGATATAGCTGAAGGGTTGCCAGTATGTGAGGAGTCTTGTGAAATTAAGGAT
ATTTTATCTCAACATGGTGCACTCAGATCTAGGGAGCTGAATCAGCCTCGAGATGAGCTA
AGGAAGACAGTGACAGAGATAAAGAAAGATGTCCACACACAGCTGGAGCAAACAAGAAAA
ACCAACAAAAATGTTCATGGCATTGCTAAAGAACTCAGAAAGTTGCACAGAGAAGGCATC
AACAATGCTACAAACTCTGTAACTGTTGTTGCTGTGCTGTTTGCAACAGTTGCTTTTGCA
GCTATATTCACCGTGCCTGGTGGAAATGACAATAATGGACTTGCCGTTGTTGTTCAGGCT
ACATCCTTTAAGATATTCTTCATCTTCAATGCCGTAGCTCTATTTACATCATTGGCAGTG
GTCGTAGTTCAAATAACAGTTGTCAGGGGAGAAACCAAGTCTGAGCGAAGGGTTGTTGAG
GTGATCAACAAACTTATGTGGATAGCATCGGTTTGTACTACAATATCTTTCATTGCCTCC
TGCTATATTGTGCTAGGCCGCCATTTCCAGTGGGCAGCAATATTGGTATCTTTGATAGGT
GGTGTCACAATGGCTGGTGTACTTGGTACTATGACATACTATGTGGTGAAATCAAAGCGC
CAAAGGAAGATTAGAAAAAAGGAGAAGATGTCAAGAAGAAGTGGCTCAAGCTCTTGGTAT
GATCATACTGAGCTCTCAGATACTGAACTTAACCCAGTATATGCCTTGTAA

Peptide Sequence

PEP ID

EES03848
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:66881410:66885198:-1 gene:SORBI_3003G348400 transcript:EES03848 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSLEIHEEDGGASGARPAKVMSVSGSGKRGRYVRQVTGRHNDTDIHVAARGGDAVALRRA
LSVAAAAVAATGEGPEDLEAARRAVAAEPNEAGETPLVAAAERGHLEVVVELLRHLDAEG
LAAKNRSGYDALHVAAREGRHAVVQEMLHHDRMLAKTFGPANTTPLISAAMRGHIEVVEL
LLEQDDFGLVEMARDNGKNALHFAARQGHIGIVKALLEKDPQLARRNDKKGQTALHMAVK
GTSCDVLRALVDADPAIVMLPDKNGNTALHVATRKKRAEIVSVLLRLPDTHVNALNRDHK
TAFDIAEGLPVCEESCEIKDILSQHGALRSRELNQPRDELRKTVTEIKKDVHTQLEQTRK
TNKNVHGIAKELRKLHREGINNATNSVTVVAVLFATVAFAAIFTVPGGNDNNGLAVVVQA
TSFKIFFIFNAVALFTSLAVVVVQITVVRGETKSERRVVEVINKLMWIASVCTTISFIAS
CYIVLGRHFQWAAILVSLIGGVTMAGVLGTMTYYVVKSKRQRKIRKKEKMSRRSGSSSWY
DHTELSDTELNPVYAL

Transcript Sequence

Transcript ID

EES03848
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:66881410:66885198:-1 gene:SORBI_3003G348400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GAAGCTCCCCAAAATGCCAAAGTAGACGTTACCGTCTCGGTCTCCTCCTCCTCCCCCACC
CGGCCACTGCACCTTCCTCCCGCCTTCCTCCTTGACGACGCCGCCGCGGCCGGCTCGCGG
GTCGCGGTTGCTCACTCCTCTTAAAGCGCGCGCCCCGCCAAACCCTACTTCGGAAACCCT
TTCACTCCACGGGGCCCCAGTTGCGCCTCTCGCAATGTCGCTCGAGATCCACGAGGAGGA
TGGTGGGGCGTCTGGTGCACGCCCGGCGAAGGTGATGTCTGTTTCGGGGAGCGGGAAGCG
GGGCCGGTACGTGCGGCAGGTGACGGGGCGGCACAACGACACCGACATCCACGTGGCCGC
GCGGGGCGGGGACGCCGTGGCGCTACGCCGCGCGCTGTCTGTGGCCGCGGCGGCCGTGGC
CGCCACGGGGGAGGGACCCGAGGACCTCGAGGCGGCGCGGCGCGCGGTGGCCGCAGAGCC
CAACGAGGCCGGGGAGACGCCGCTCGTCGCCGCCGCGGAGAGGGGCCACCTCGAGGTGGT
GGTGGAGCTGCTGCGGCACCTCGACGCCGAGGGCCTGGCCGCGAAGAACAGGTCCGGGTA
CGACGCGCTGCACGTCGCTGCCAGAGAAGGGCGTCATGCTGTTGTGCAGGAAATGTTACA
TCATGATAGGATGCTTGCCAAAACATTTGGCCCTGCAAATACTACTCCACTTATATCAGC
AGCTATGAGGGGCCATATTGAAGTTGTTGAACTGTTGCTGGAACAAGATGACTTTGGATT
GGTGGAAATGGCCAGAGATAATGGAAAAAATGCCTTACATTTTGCTGCTCGACAGGGACA
TATTGGAATTGTCAAAGCGCTACTTGAGAAGGATCCTCAGTTAGCAAGAAGAAATGACAA
GAAAGGTCAAACAGCTCTTCATATGGCCGTAAAGGGAACAAGCTGTGATGTTCTTAGAGC
CCTAGTGGATGCTGATCCAGCAATTGTAATGCTACCAGATAAAAATGGGAACACAGCTTT
GCATGTTGCAACAAGAAAAAAAAGAGCAGAGATAGTTAGTGTTCTTTTGCGGCTACCAGA
TACCCATGTCAATGCACTGAACAGAGACCACAAGACTGCCTTTGATATAGCTGAAGGGTT
GCCAGTATGTGAGGAGTCTTGTGAAATTAAGGATATTTTATCTCAACATGGTGCACTCAG
ATCTAGGGAGCTGAATCAGCCTCGAGATGAGCTAAGGAAGACAGTGACAGAGATAAAGAA
AGATGTCCACACACAGCTGGAGCAAACAAGAAAAACCAACAAAAATGTTCATGGCATTGC
TAAAGAACTCAGAAAGTTGCACAGAGAAGGCATCAACAATGCTACAAACTCTGTAACTGT
TGTTGCTGTGCTGTTTGCAACAGTTGCTTTTGCAGCTATATTCACCGTGCCTGGTGGAAA
TGACAATAATGGACTTGCCGTTGTTGTTCAGGCTACATCCTTTAAGATATTCTTCATCTT
CAATGCCGTAGCTCTATTTACATCATTGGCAGTGGTCGTAGTTCAAATAACAGTTGTCAG
GGGAGAAACCAAGTCTGAGCGAAGGGTTGTTGAGGTGATCAACAAACTTATGTGGATAGC
ATCGGTTTGTACTACAATATCTTTCATTGCCTCCTGCTATATTGTGCTAGGCCGCCATTT
CCAGTGGGCAGCAATATTGGTATCTTTGATAGGTGGTGTCACAATGGCTGGTGTACTTGG
TACTATGACATACTATGTGGTGAAATCAAAGCGCCAAAGGAAGATTAGAAAAAAGGAGAA
GATGTCAAGAAGAAGTGGCTCAAGCTCTTGGTATGATCATACTGAGCTCTCAGATACTGA
ACTTAACCCAGTATATGCCTTGTAAAGAGTGTTTGTCTCTGGAGTCGAGTATGTACTAAC
AGATACAATAGCTTGCTTACATTATTTGTTGATTGTACAATTTCTCCAGTAACAACAAAA
CCACACAGAACTTGCCCATTGTGCAAGGCTCCTGCAGTTGACGAATTTGATGGCACCCAA
TGTGCTCAATCTGTTGTACAT