Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES03625
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:63023213:63027714:-1 gene:SORBI_3003G299000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCCGTCCCCGGCGCCCCCTCGGGCCGCGGCTCCGGCGGCGGCGGCGGATCCCGCAGC
TTCGACTTCGGCGCCGACGACGTGCTCTGCTCCTACGATGACTTCGCCGCCCCATCCGAG
CCCAAGCGCCCCGATCCGGCCGACAAGGATTTTCATGACAGCAGATTGGGGAGGCCATTT
GTGAAACCTTATGAACAAGAAAGTTATGGCAAAGAGGATGTGCTTTCTGCTGTTGAGAAA
TGCATGAAAAAGTATGCTGATAATTTGCTACGATCTCTTGAGGGAATCACTAGTCGGCTT
TCACAACTGGAGATTTATTGCTATAAGCTTGAGAGATCCATAGGTGAACTTCGAAGCGAC
GTGCTTCGTGATGAGACTGACCATAGATTGAAGTCTCTTGAGAAACATTTACATGAAGTA
CACAGGTCTATCCAAATTCTTAGGGACAAACAGGAGTTAGCTGAAGCTCAGAAGGAATTG
GCCAAATTTCAACTTACACAGGATACATCTAAAAAGAAGGAAGATGTACCAACACCATCT
ATTCCTGAGCAAAAGAAGCTTGAAGAAAACCCTGATACATCGAACCAGCAATTGGCTCTT
GTTTTACCGCATCAGGTGAACCTGCCATCACTTGCACCTAGAGCTTCTGAATCAGTCCAA
CAGTACAAGGATCAACCTGTGCAACAATCAGCCCCTACCCCTCCTGTGCCACAGCAGGAC
CGCTATGTTCTTAGCCAAGCTATCGTCTACTACCCACAGTGCCAAGCTCCAGGTATCCAG
GACACACAGGGGCAACCATTGCAACCAGAAGTGCAATACTTACCATCAAGACCCGCAGCA
CAAGATGTTCCAGTCCATGCTCCATCCCAGCCACCTCAGACTGGAAATCAAACACAGCCA
CAGCCTTACCCTCCTTACCAGCAGCAGTGGCACCAGCAGTCCCCCCAGCCAACTCCAGCA
CCAGTGGCCCAGACACAACAGACTTTCTCACAACCATTTCCTCCACCCGCACAGAAGCCC
CAGCTATCCAATGTGCAGCAGTTTTCACCGCAACCGGTACAGCAGCCCCAATCCAATGCT
CAACAGTATCCTCCACCAGTGCAACCACAGCAATCTAGCCCACAGCTTCCTCAGGCAATG
CAACCACAACATCCTCCTGTGCAAACTCAGATGAGACCTCAAACCCCACCAAACTACACT
CATTATCCACCCCACCAGCCATTGAACCCCAGCACTGAAACTCTTCCTGCCAATGTGGCT
ATGCAAGGACCCTACAACACTGCTGCTCCATCAGGTGCCAGCCGTTCTGAACCGCCGTAT
TCGTATGGAGGGCCTGGCATCCCTCCGTCTCAGCCACCGCCGCAGCACAACATGCAAAGG
CACCAACTACCACCTTCAAGTCAGAGCTCCTTTGGGCCACCTCCAAGCAAAGGGTCCTAT
GCTAGCCCTACACAGTATGCTCCGCAGGGCAATCCGCAAGGCTACAACACAGGTTACGCT
TACCCACCAAGCGGCCCTCCAGCAGTCCAGCCGCAACAGATGCCTCCAGGTGGAGTCGGC
ATGAGCCATCCAGGGTCGCATATGATGCGTGGCCATCCCTACGGAGAAATGATGGAGAAG
GCGATCACCATGGGATACCCTAGGGACCAGGTGCTGAACGTCACCCAAAGGATGGCCGAG
AGTGGCCAGCCAATGGATTTCAACACCCTGCTCGACAGGCTGAACGAAGCAGGGTCGGGA
GCACCACCCCCGCGCGCGTGGTGA

Peptide Sequence

PEP ID

EES03625
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:63023213:63027714:-1 gene:SORBI_3003G299000 transcript:EES03625 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSVPGAPSGRGSGGGGGSRSFDFGADDVLCSYDDFAAPSEPKRPDPADKDFHDSRLGRPF
VKPYEQESYGKEDVLSAVEKCMKKYADNLLRSLEGITSRLSQLEIYCYKLERSIGELRSD
VLRDETDHRLKSLEKHLHEVHRSIQILRDKQELAEAQKELAKFQLTQDTSKKKEDVPTPS
IPEQKKLEENPDTSNQQLALVLPHQVNLPSLAPRASESVQQYKDQPVQQSAPTPPVPQQD
RYVLSQAIVYYPQCQAPGIQDTQGQPLQPEVQYLPSRPAAQDVPVHAPSQPPQTGNQTQP
QPYPPYQQQWHQQSPQPTPAPVAQTQQTFSQPFPPPAQKPQLSNVQQFSPQPVQQPQSNA
QQYPPPVQPQQSSPQLPQAMQPQHPPVQTQMRPQTPPNYTHYPPHQPLNPSTETLPANVA
MQGPYNTAAPSGASRSEPPYSYGGPGIPPSQPPPQHNMQRHQLPPSSQSSFGPPPSKGSY
ASPTQYAPQGNPQGYNTGYAYPPSGPPAVQPQQMPPGGVGMSHPGSHMMRGHPYGEMMEK
AITMGYPRDQVLNVTQRMAESGQPMDFNTLLDRLNEAGSGAPPPRAW

Transcript Sequence

Transcript ID

EES03625
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:63023213:63027714:-1 gene:SORBI_3003G299000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTAAAACAAGCCCGGAATTTTCGTCCCTACCGAGACGGCGAGAAAAGCCTTTTTTGCTTA
ATTAACACCCCGGCGGCACAGCCCAAACCGTCTTCCTTCACAACTAATCTCTCTTCCTCC
TCCTCTGTTCCTCCCCCTCCCCCTCCTTCACACGAAACAACACTTTCCTTTCCTTTTTCC
TCCACACAAGCAAGACGCTCAACCTGCCGGCAGCCGCCCGGGCAAAACCCTAGCCCCGCG
ATGTCCGTCCCCGGCGCCCCCTCGGGCCGCGGCTCCGGCGGCGGCGGCGGATCCCGCAGC
TTCGACTTCGGCGCCGACGACGTGCTCTGCTCCTACGATGACTTCGCCGCCCCATCCGAG
CCCAAGCGCCCCGATCCGGCCGACAAGGATTTTCATGACAGCAGATTGGGGAGGCCATTT
GTGAAACCTTATGAACAAGAAAGTTATGGCAAAGAGGATGTGCTTTCTGCTGTTGAGAAA
TGCATGAAAAAGTATGCTGATAATTTGCTACGATCTCTTGAGGGAATCACTAGTCGGCTT
TCACAACTGGAGATTTATTGCTATAAGCTTGAGAGATCCATAGGTGAACTTCGAAGCGAC
GTGCTTCGTGATGAGACTGACCATAGATTGAAGTCTCTTGAGAAACATTTACATGAAGTA
CACAGGTCTATCCAAATTCTTAGGGACAAACAGGAGTTAGCTGAAGCTCAGAAGGAATTG
GCCAAATTTCAACTTACACAGGATACATCTAAAAAGAAGGAAGATGTACCAACACCATCT
ATTCCTGAGCAAAAGAAGCTTGAAGAAAACCCTGATACATCGAACCAGCAATTGGCTCTT
GTTTTACCGCATCAGGTGAACCTGCCATCACTTGCACCTAGAGCTTCTGAATCAGTCCAA
CAGTACAAGGATCAACCTGTGCAACAATCAGCCCCTACCCCTCCTGTGCCACAGCAGGAC
CGCTATGTTCTTAGCCAAGCTATCGTCTACTACCCACAGTGCCAAGCTCCAGGTATCCAG
GACACACAGGGGCAACCATTGCAACCAGAAGTGCAATACTTACCATCAAGACCCGCAGCA
CAAGATGTTCCAGTCCATGCTCCATCCCAGCCACCTCAGACTGGAAATCAAACACAGCCA
CAGCCTTACCCTCCTTACCAGCAGCAGTGGCACCAGCAGTCCCCCCAGCCAACTCCAGCA
CCAGTGGCCCAGACACAACAGACTTTCTCACAACCATTTCCTCCACCCGCACAGAAGCCC
CAGCTATCCAATGTGCAGCAGTTTTCACCGCAACCGGTACAGCAGCCCCAATCCAATGCT
CAACAGTATCCTCCACCAGTGCAACCACAGCAATCTAGCCCACAGCTTCCTCAGGCAATG
CAACCACAACATCCTCCTGTGCAAACTCAGATGAGACCTCAAACCCCACCAAACTACACT
CATTATCCACCCCACCAGCCATTGAACCCCAGCACTGAAACTCTTCCTGCCAATGTGGCT
ATGCAAGGACCCTACAACACTGCTGCTCCATCAGGTGCCAGCCGTTCTGAACCGCCGTAT
TCGTATGGAGGGCCTGGCATCCCTCCGTCTCAGCCACCGCCGCAGCACAACATGCAAAGG
CACCAACTACCACCTTCAAGTCAGAGCTCCTTTGGGCCACCTCCAAGCAAAGGGTCCTAT
GCTAGCCCTACACAGTATGCTCCGCAGGGCAATCCGCAAGGCTACAACACAGGTTACGCT
TACCCACCAAGCGGCCCTCCAGCAGTCCAGCCGCAACAGATGCCTCCAGGTGGAGTCGGC
ATGAGCCATCCAGGGTCGCATATGATGCGTGGCCATCCCTACGGAGAAATGATGGAGAAG
GCGATCACCATGGGATACCCTAGGGACCAGGTGCTGAACGTCACCCAAAGGATGGCCGAG
AGTGGCCAGCCAATGGATTTCAACACCCTGCTCGACAGGCTGAACGAAGCAGGGTCGGGA
GCACCACCCCCGCGCGCGTGGTGATTGGATCCAGTTTGGGCGCGGTGCTTGGTGTCAGTT
ATGTGACTTACGACTGTTATCATGCAGCTAAATAAATACGTAAGATCTGGGCTGATGCCG
TGTACTGCTTATCTGTACTATGTACATATATAATTGTGAATTTTTCATGTAACTGATGCA
GCACTTGTACTACGAACATATCACGCCACTGTTCAGATATGTATATTTCGAAGCCAATTA
CCGGCAGGCATCCTGACATT