Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES03597
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:62602964:62607023:-1 gene:SORBI_3003G293600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCTCCCACTATGGCTTCGTCGCTCTGCGTGTTTGCAGCGATGTCTGGCGCCACCGGC
AGGCCGTCGTCGACCGGTGGCTCGGTGGTGCCGCCGGGCCGTCTGTCCAGTACTGCACAG
GGGACCAAGGGAAAGAGGGCCGTGGTGCAGCCTCTCGCGGCTAGCGTCGTGACGGACACG
CCGACGCCGACGCCGGCCATAGCTCCGGCGGCCCCGCCAGCTCGGCCAGTCGTCGACGCC
CCGCGCCGCCGTGGGGGCCGCGGCACCGGCGAGCACGCGGCGTGGAAGAGCGTCCGGCAG
GAGAGGTGGGAGGGGGCGCTGGAGCTGGAGGGAGAGCTGCCGCTCTGGCTGGATGGCACG
TACCTGAGGAACGGCCCGGGCCTGTGGAACCTGGGCGACTACGGCTTCCGGCACCTGTTC
GACGGCTACGCGACGCTGGTCCGCGTCTCGTTCCGCAACGGGCACGCGGTGGGCGCGCAC
CGGCAGATCGAGTCGGAGGCGTACAAGGCGGCGCGCGCGAACGGCAAGGTGTGCTACCGC
GAGTTCTCGGAGGTGCCCAAGGCGGACAGCTTCCTCTCCCACGTGGGCCAGCTCGCCACC
CTCTTCTCGGGCTCCTCGCTCACCGACAACTCCAACACGGGCGTGGTCAGGCTCGGCGAC
GGCCGCGTGCTGTGCCTGACGGAGACCATCAAGGGCTCCATCGTGGTCGACCCGGACACG
CTGGACACCCTCGGCAAGTTCGAGTACACGGACAAGCTGGGCGGCCTCATCCACTCGGCG
CACCCCATCGTGACGGACACCGAGTTCTGGACGCTGATCCCGGACCTCATCCGCCCGGGC
TACTCGGTGGTGCGGATGGACGCCGGGACCAACGAGCGGCGGTTCGTCGGCAGGGTGGAC
TGCCGCGGCGGGCCGGCGCCCGGGTGGGTGCACTCGTTCCCCATCACGGACCACTACGTG
GTCGTGCCGGAGATGCCGCTCCGGTACTGCGCCAGGAACCTCCTCCGCGCGGAGCCCACC
CCGCTGTACAAGTTCGAGTGGCACCTCGAGTCCGGCAGCTACATGCACGTCATGTGCAAG
GCCAGCGGCAGGGTCGTGGCCAGCGTGGAGGTGCCGCCCTTCGTCACCTTCCACTTCATC
AACGCGTACGAGGAGAAGGACGAGGAGGGCCGCGTCACGGCGATCGTCGCCGACTGCTGC
GAGCACAACGCCAACACCACCATCCTCGACAAGCTCCGGCTCCAGAACCTCCGCTCTTCC
ACCGGGCAGGACGTCCTCCCGGACGCCAGGGTGGGCCGGTTCAGGATCCCGCTGGACGGG
AGCCCGTTCGGCGAGCTGGAGTCGGCGCTGGACCCGGACCAGCACGGCCGCGGGATGGAC
ATGTGCAGCATCAACCCGGCCCACGTCGGCAAGAAGTACCGGTACGCCTACGCCTGCGGC
GCCCAGCGGCCGTGCAACTTCCCAAACACCCTCACCAAGATCGACCTGGTGGAGAAGACG
GCCAAGAACTGGTACGAGGAGGGCGCCGTGCCGTCAGAGCCCTTCTTCGTGCCGCGCCCG
GGCGCCGTGGAGGAGGACGACGGCGTTGCGATTTCGATGGTGAGCGCCAAGGACGGATCG
GCGTACGCGCTAGTGCTGGACGCCAAGACGTTCCAGGAGATCGCGCGGGCCAAGTTCCCG
TACGCGATGCCCTACGGTTTGCACTGCTGCTGGGTGCCTAGGACCACCTCAGACGCGTAG

Peptide Sequence

PEP ID

EES03597
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:62602964:62607023:-1 gene:SORBI_3003G293600 transcript:EES03597 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSPTMASSLCVFAAMSGATGRPSSTGGSVVPPGRLSSTAQGTKGKRAVVQPLAASVVTDT
PTPTPAIAPAAPPARPVVDAPRRRGGRGTGEHAAWKSVRQERWEGALELEGELPLWLDGT
YLRNGPGLWNLGDYGFRHLFDGYATLVRVSFRNGHAVGAHRQIESEAYKAARANGKVCYR
EFSEVPKADSFLSHVGQLATLFSGSSLTDNSNTGVVRLGDGRVLCLTETIKGSIVVDPDT
LDTLGKFEYTDKLGGLIHSAHPIVTDTEFWTLIPDLIRPGYSVVRMDAGTNERRFVGRVD
CRGGPAPGWVHSFPITDHYVVVPEMPLRYCARNLLRAEPTPLYKFEWHLESGSYMHVMCK
ASGRVVASVEVPPFVTFHFINAYEEKDEEGRVTAIVADCCEHNANTTILDKLRLQNLRSS
TGQDVLPDARVGRFRIPLDGSPFGELESALDPDQHGRGMDMCSINPAHVGKKYRYAYACG
AQRPCNFPNTLTKIDLVEKTAKNWYEEGAVPSEPFFVPRPGAVEEDDGVAISMVSAKDGS
AYALVLDAKTFQEIARAKFPYAMPYGLHCCWVPRTTSDA

Transcript Sequence

Transcript ID

EES03597
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:62602964:62607023:-1 gene:SORBI_3003G293600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AACCGGAGGAAACCACGCCAGCAGAGCGGCGACGACAGCCAGCAACGTGCCAACGCAATC
CAAACAAGGGGGGCGCGTCATTTTGCTCATCGAATTTGCCCAGCCAAAGATTCCACCCCG
TTGCCTCCCCTACGCCGCGCGCGCGGCTATATATATGGCCTTGACCGGGGCACGAACTCG
CTCGTCCCAAACCAAACCAGTACACACCACACTCTCGGCTAGCTAGCTAGCGAGCTACTA
CTACTGGACCTCTCCTTTCCTTATTAGCTCCAAATTAAAAGCCCCGCCCCTGGTACTACA
ACCCTAGCAAGAGCATTTTGCCATGTCTCCCACTATGGCTTCGTCGCTCTGCGTGTTTGC
AGCGATGTCTGGCGCCACCGGCAGGCCGTCGTCGACCGGTGGCTCGGTGGTGCCGCCGGG
CCGTCTGTCCAGTACTGCACAGGGGACCAAGGGAAAGAGGGCCGTGGTGCAGCCTCTCGC
GGCTAGCGTCGTGACGGACACGCCGACGCCGACGCCGGCCATAGCTCCGGCGGCCCCGCC
AGCTCGGCCAGTCGTCGACGCCCCGCGCCGCCGTGGGGGCCGCGGCACCGGCGAGCACGC
GGCGTGGAAGAGCGTCCGGCAGGAGAGGTGGGAGGGGGCGCTGGAGCTGGAGGGAGAGCT
GCCGCTCTGGCTGGATGGCACGTACCTGAGGAACGGCCCGGGCCTGTGGAACCTGGGCGA
CTACGGCTTCCGGCACCTGTTCGACGGCTACGCGACGCTGGTCCGCGTCTCGTTCCGCAA
CGGGCACGCGGTGGGCGCGCACCGGCAGATCGAGTCGGAGGCGTACAAGGCGGCGCGCGC
GAACGGCAAGGTGTGCTACCGCGAGTTCTCGGAGGTGCCCAAGGCGGACAGCTTCCTCTC
CCACGTGGGCCAGCTCGCCACCCTCTTCTCGGGCTCCTCGCTCACCGACAACTCCAACAC
GGGCGTGGTCAGGCTCGGCGACGGCCGCGTGCTGTGCCTGACGGAGACCATCAAGGGCTC
CATCGTGGTCGACCCGGACACGCTGGACACCCTCGGCAAGTTCGAGTACACGGACAAGCT
GGGCGGCCTCATCCACTCGGCGCACCCCATCGTGACGGACACCGAGTTCTGGACGCTGAT
CCCGGACCTCATCCGCCCGGGCTACTCGGTGGTGCGGATGGACGCCGGGACCAACGAGCG
GCGGTTCGTCGGCAGGGTGGACTGCCGCGGCGGGCCGGCGCCCGGGTGGGTGCACTCGTT
CCCCATCACGGACCACTACGTGGTCGTGCCGGAGATGCCGCTCCGGTACTGCGCCAGGAA
CCTCCTCCGCGCGGAGCCCACCCCGCTGTACAAGTTCGAGTGGCACCTCGAGTCCGGCAG
CTACATGCACGTCATGTGCAAGGCCAGCGGCAGGGTCGTGGCCAGCGTGGAGGTGCCGCC
CTTCGTCACCTTCCACTTCATCAACGCGTACGAGGAGAAGGACGAGGAGGGCCGCGTCAC
GGCGATCGTCGCCGACTGCTGCGAGCACAACGCCAACACCACCATCCTCGACAAGCTCCG
GCTCCAGAACCTCCGCTCTTCCACCGGGCAGGACGTCCTCCCGGACGCCAGGGTGGGCCG
GTTCAGGATCCCGCTGGACGGGAGCCCGTTCGGCGAGCTGGAGTCGGCGCTGGACCCGGA
CCAGCACGGCCGCGGGATGGACATGTGCAGCATCAACCCGGCCCACGTCGGCAAGAAGTA
CCGGTACGCCTACGCCTGCGGCGCCCAGCGGCCGTGCAACTTCCCAAACACCCTCACCAA
GATCGACCTGGTGGAGAAGACGGCCAAGAACTGGTACGAGGAGGGCGCCGTGCCGTCAGA
GCCCTTCTTCGTGCCGCGCCCGGGCGCCGTGGAGGAGGACGACGGCGTTGCGATTTCGAT
GGTGAGCGCCAAGGACGGATCGGCGTACGCGCTAGTGCTGGACGCCAAGACGTTCCAGGA
GATCGCGCGGGCCAAGTTCCCGTACGCGATGCCCTACGGTTTGCACTGCTGCTGGGTGCC
TAGGACCACCTCAGACGCGTAGCACTAGCAGATCGTTCGACTCTGCTAGCTGCTCACATC
TCCACAGCGTGCCGACTTGCCAGACATAGGCATAATAACTACAGACAGGATGTCTGCTGG
TTTCCTGGCCTTTGGCTGAAGAATGGGAAAAGGTATACATACACGTCATAGTGATGTATA
GGCAGATATATATATATACGTGATGCATGCGCTACAGGGAATCAACATGGTCTTCCCACA
GCTCAATGTGTGGCTGTGTATATATATACCTGTAGACTGTAGTAGTTACACGCCTGTAAT
GTGTACATAGTTCATGTGTGATCGAGCTCATAGTGTTGTTCT