Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES03540
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:61551596:61556665:-1 gene:SORBI_3003G280300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAGGGGGAAAAAGCCGCTCAAGGACCTCAGGCTCTCCGTGCCGGCGCAGGAGACCCCC
GTCGACAAGTTCCTGACGGCAAGTGGTACGTTCAAGGATGGTGAGCTGCGGCTCAATCAA
AGTGGCTTGCGACTTATCTCCGAGGAAAATGGGGGTGAAGATGAATCAACAAAGCTGAAG
GTGGAAGATGTGCAGTTATCAATGGATGATCTTGAGATGATTCAAGTCATTGGCAAAGGA
AGTGGTGGCATTGTCCAGCTAGTGAGGCACAAATGGGTGGGGACATTGTATGCCTTAAAG
GGTATACAAATGAACATTCAGGAGTCAGTTCGTAAACAAATAGTACAGGAGCTCAAAATA
AACCAAGCAACACAGTGCCCTCATATAGTTATGTGCCATCAATCTTTTTACCACAATGGT
GTAATATATCTTGTTCTTGAGTACATGGACCGTGGATCACTTGCAGACATTGTTAAGCAA
GTGAAGACTGTTCTGGAGCCATACCTTGCGGTACTTTGTAAGCAGGTCTTGGAGGGTTTA
TTGTATCTTCATCATGAAAGGCACGTGATTCACAGGGACATAAAACCATCTAACTTGTTG
GTCAACCGTAAAGGTGAAGTTAAGATTACTGACTTCGGCGTGAGTGCTGTGCTAGCAAGC
TCAATAGGACAGCGAGATACATTTGTTGGAACCTACAACTATATGGCGCCTGAGCGGATT
AGTGGTAGTTCTTATGACTACAAAAGTGACATATGGAGTTTGGGCTTAGTTATACTTGAG
TGTGCCATTGGCCGGTTCCCTTATATACCTTCAGAAGGTGAAGGTTGGTTAAGCTTTTAT
GAACTACTGGAGGCTATTGTCGATCAGCCACCACCTTCTGCACCTGCAGATCAGTTCTCT
CCAGAATTCTGCTCATTTATCTCCTCTTGCATACAAAAAGATCCGGCTCAGCGGATGTCT
GCTTCAGAACTCTTGAACCACCCTTTTTTGAAGAAGTTTGAGGATAAGGATCTAGACCTG
CGGATTCTCGTCGAGGACCTGGAACCTCCAATGAATATACCCGAATAG

Peptide Sequence

PEP ID

EES03540
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:61551596:61556665:-1 gene:SORBI_3003G280300 transcript:EES03540 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MRGKKPLKDLRLSVPAQETPVDKFLTASGTFKDGELRLNQSGLRLISEENGGEDESTKLK
VEDVQLSMDDLEMIQVIGKGSGGIVQLVRHKWVGTLYALKGIQMNIQESVRKQIVQELKI
NQATQCPHIVMCHQSFYHNGVIYLVLEYMDRGSLADIVKQVKTVLEPYLAVLCKQVLEGL
LYLHHERHVIHRDIKPSNLLVNRKGEVKITDFGVSAVLASSIGQRDTFVGTYNYMAPERI
SGSSYDYKSDIWSLGLVILECAIGRFPYIPSEGEGWLSFYELLEAIVDQPPPSAPADQFS
PEFCSFISSCIQKDPAQRMSASELLNHPFLKKFEDKDLDLRILVEDLEPPMNIPE

Transcript Sequence

Transcript ID

EES03540
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:61551596:61556665:-1 gene:SORBI_3003G280300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGGCGTCCAGGTCCCGAAAAAACTGGCTTTTCTCCTCCCTCCCGGTCTACTCGCCGAGTA
GTACTCCTCTCTACTCGCCTTCTTCGGTTCTTCCTCCCCGAGCAGCCACTTCCGTCTCTA
ACCCTACTGCGACGACGAGAGCGAGGCCATGAGGGGGAAAAAGCCGCTCAAGGACCTCAG
GCTCTCCGTGCCGGCGCAGGAGACCCCCGTCGACAAGTTCCTGACGGCAAGTGGTACGTT
CAAGGATGGTGAGCTGCGGCTCAATCAAAGTGGCTTGCGACTTATCTCCGAGGAAAATGG
GGGTGAAGATGAATCAACAAAGCTGAAGGTGGAAGATGTGCAGTTATCAATGGATGATCT
TGAGATGATTCAAGTCATTGGCAAAGGAAGTGGTGGCATTGTCCAGCTAGTGAGGCACAA
ATGGGTGGGGACATTGTATGCCTTAAAGGGTATACAAATGAACATTCAGGAGTCAGTTCG
TAAACAAATAGTACAGGAGCTCAAAATAAACCAAGCAACACAGTGCCCTCATATAGTTAT
GTGCCATCAATCTTTTTACCACAATGGTGTAATATATCTTGTTCTTGAGTACATGGACCG
TGGATCACTTGCAGACATTGTTAAGCAAGTGAAGACTGTTCTGGAGCCATACCTTGCGGT
ACTTTGTAAGCAGGTCTTGGAGGGTTTATTGTATCTTCATCATGAAAGGCACGTGATTCA
CAGGGACATAAAACCATCTAACTTGTTGGTCAACCGTAAAGGTGAAGTTAAGATTACTGA
CTTCGGCGTGAGTGCTGTGCTAGCAAGCTCAATAGGACAGCGAGATACATTTGTTGGAAC
CTACAACTATATGGCGCCTGAGCGGATTAGTGGTAGTTCTTATGACTACAAAAGTGACAT
ATGGAGTTTGGGCTTAGTTATACTTGAGTGTGCCATTGGCCGGTTCCCTTATATACCTTC
AGAAGGTGAAGGTTGGTTAAGCTTTTATGAACTACTGGAGGCTATTGTCGATCAGCCACC
ACCTTCTGCACCTGCAGATCAGTTCTCTCCAGAATTCTGCTCATTTATCTCCTCTTGCAT
ACAAAAAGATCCGGCTCAGCGGATGTCTGCTTCAGAACTCTTGAACCACCCTTTTTTGAA
GAAGTTTGAGGATAAGGATCTAGACCTGCGGATTCTCGTCGAGGACCTGGAACCTCCAAT
GAATATACCCGAATAGCCTGCCTTGTTGGGTGATGAAGCCTTTGTTGTGCCTTCAGGGTT
TGACATCGATGCATCTAGCAGCAGGGCATCTGCTCCTGAACTGCAGCCTCCAATTCCCTA
CATGAACATGCCATAACATCGATCATTGTATGATCCAAGACCCTTGTGGCTAGCTGAGCA
TAAGAGCAGAGGAAGTCATGCTGCGTTCCGTATGGTCACCTTATTGTAGCTATTGTTGCG
TTGGCCTTGTGATTGCGAGTCTTGTTTTAACTTTTGCAGTCTTATTATTGGCAGACGATT
CAAAAGGGACGAACTGAATATTCAAAACATGCTTGCCAACATGATTCAAGGATGCTATG