Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES03487
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:60624004:60628867:-1 gene:SORBI_3003G269500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGGTGGGGAGAAATCATCTCGAGCCAGCTGCTGATAGAGTCGTCGTCGTCGTCCTTG
CCGGCGGTTCTTTTCACCGCCGCGGCCTTGGCCGCCGGCGCCTTTGCGGTCTACTTCTAC
ATACCATCATGGCGCGTGCGAAGGGTCCCCGGGCCCGTCGCGCTCCCGCTCGTCGGACAC
CTGCCGTTGTTCGCCAAGCACGGCCCGGGACTGTTCCGCATGTTGGCGAAGGAATACGGG
CCAATCTACAGGTTCCACATGGGTAGGCAGCCACTGGTTATGGTGGCAGACGCGGAGCTT
TGCAAGGAGGTGGGTATCAAGAAGTTCAAGAGCATCCCCAACAGAAGCATACCCACTCCA
ATTCGTGGCTCACCTATTCACAACAAGGGCCTCTTCTTCACCAGGGACTCGAGATGGCAA
TCCATGAGGAACGTCATCCTCACCATCTACCAGCCGTCGCACGTGGCAAGCCTCATCCCG
GCCATCCAACCATACGTCGAGCGGGCGGGGCGTCTCCTCCACCCCGGCGAGGAGATCACC
TTCTCGGACCTCTCCTTAAAGCTCTTCAATGACACCATCGGCCAGGTCGCCTTCGGCGTC
GACTTCGGCCTCACCAAGGACGACACCACCGCCGCCACCTCGCCGGCGGCGCAGCAGCAA
CCCGCCCACGGCGGCGCCAATGCCAATCAGAGCGTCGACGACCCGGCCACCGACTTCATC
CGGAAGCACTTCCGCGCCACGACGTCGCTCAAGATGGACCTGTCTGGCCCGCTGTCCATC
GTGCTCGGCCAGTTCGTGCCGTTCCTCCAGGAGCCCGTGCGGCAGCTCATGCTGCGCGTG
CCAGGCTCCGCCGACCGGCGCCTGGAAGAGGCCAACTCGGACATGAGCGGCCTCCTTGAC
GAGATTGTGGCGGAGCGGGCGGCGCAGGCGGACAGGGGCCAGCAGAAGAACTTCCTGTCC
GTGTTGCTCAACGCCAGAGAGAGCACGGAGGCCATGAAGAAGCTGCTCACTCCGGACTAC
GTGAGCGCGCTCACGTACGAGCACCTGCTCGCCGGGTCTGTCACCATGTCGTTCACGCTC
TCCAGCCTGGTCTACCTCGTCGCGATGCACCCGGAGGTGGAGGAGAAGCTGCTTCGGGAG
ATCGACGCTTTTGGGCCCAAGGACGTGGTGCCCAGCTCCGACGACCTTGAGACAAAGTTT
CCCTACGTTGAACAGGTTGTGAAGGAAACAATGAGATTCTACACTGCATCTCCACTGGTT
GCAAGGCAAGCATCCGAGGATGTTGAGGTTGGAGGGTACCTCCTGCCCAAGGGCACATGG
GTGTGGCTGGCGCCCGGCGTGCTAGCGAAAGATCCCAAGGACTTTCCAGACCCGGACGTA
TTCCGGCCGGAGCGTTTCGACCCGGAGAGTGAGGAGTGCAAGCGAAGGCATCCCTACGCG
TTCATCCCCTTCGGCATCGGCCCCCGGGCATGCATCGGCCAGAAGTTTGCCATGCAGCAG
CTGAAGCTAGTCGTCATCCACCTCTACCGCAACTACATCTTCAGGCACTCGCCCAGGATG
GAGTTTCCCCTGCAGTTCCAGTACTCCATTTTGGTCAACTTCAAGTATGGTGTCAAGGTG
CAGGTCATCGAGAGGAAAAACTGA

Peptide Sequence

PEP ID

EES03487
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:60624004:60628867:-1 gene:SORBI_3003G269500 transcript:EES03487 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGWGEIISSQLLIESSSSSLPAVLFTAAALAAGAFAVYFYIPSWRVRRVPGPVALPLVGH
LPLFAKHGPGLFRMLAKEYGPIYRFHMGRQPLVMVADAELCKEVGIKKFKSIPNRSIPTP
IRGSPIHNKGLFFTRDSRWQSMRNVILTIYQPSHVASLIPAIQPYVERAGRLLHPGEEIT
FSDLSLKLFNDTIGQVAFGVDFGLTKDDTTAATSPAAQQQPAHGGANANQSVDDPATDFI
RKHFRATTSLKMDLSGPLSIVLGQFVPFLQEPVRQLMLRVPGSADRRLEEANSDMSGLLD
EIVAERAAQADRGQQKNFLSVLLNARESTEAMKKLLTPDYVSALTYEHLLAGSVTMSFTL
SSLVYLVAMHPEVEEKLLREIDAFGPKDVVPSSDDLETKFPYVEQVVKETMRFYTASPLV
ARQASEDVEVGGYLLPKGTWVWLAPGVLAKDPKDFPDPDVFRPERFDPESEECKRRHPYA
FIPFGIGPRACIGQKFAMQQLKLVVIHLYRNYIFRHSPRMEFPLQFQYSILVNFKYGVKV
QVIERKN

Transcript Sequence

Transcript ID

EES03487
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:60624004:60628867:-1 gene:SORBI_3003G269500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGGCGAGTACACGACGAACCAGGCGACGGCGAGGATGCCCACGGCGAGCCACCGGGCATC
TAGATCAGCTTCGCCCGTATTTATTAAGCCGTGCGACCAGCCAGTCGCCACCAGCTGCAC
AAGAGCCAAATCACGAACCGATCGAGACTGAGGGGAAACACCGTACCGATGGGGTGGGGA
GAAATCATCTCGAGCCAGCTGCTGATAGAGTCGTCGTCGTCGTCCTTGCCGGCGGTTCTT
TTCACCGCCGCGGCCTTGGCCGCCGGCGCCTTTGCGGTCTACTTCTACATACCATCATGG
CGCGTGCGAAGGGTCCCCGGGCCCGTCGCGCTCCCGCTCGTCGGACACCTGCCGTTGTTC
GCCAAGCACGGCCCGGGACTGTTCCGCATGTTGGCGAAGGAATACGGGCCAATCTACAGG
TTCCACATGGGTAGGCAGCCACTGGTTATGGTGGCAGACGCGGAGCTTTGCAAGGAGGTG
GGTATCAAGAAGTTCAAGAGCATCCCCAACAGAAGCATACCCACTCCAATTCGTGGCTCA
CCTATTCACAACAAGGGCCTCTTCTTCACCAGGGACTCGAGATGGCAATCCATGAGGAAC
GTCATCCTCACCATCTACCAGCCGTCGCACGTGGCAAGCCTCATCCCGGCCATCCAACCA
TACGTCGAGCGGGCGGGGCGTCTCCTCCACCCCGGCGAGGAGATCACCTTCTCGGACCTC
TCCTTAAAGCTCTTCAATGACACCATCGGCCAGGTCGCCTTCGGCGTCGACTTCGGCCTC
ACCAAGGACGACACCACCGCCGCCACCTCGCCGGCGGCGCAGCAGCAACCCGCCCACGGC
GGCGCCAATGCCAATCAGAGCGTCGACGACCCGGCCACCGACTTCATCCGGAAGCACTTC
CGCGCCACGACGTCGCTCAAGATGGACCTGTCTGGCCCGCTGTCCATCGTGCTCGGCCAG
TTCGTGCCGTTCCTCCAGGAGCCCGTGCGGCAGCTCATGCTGCGCGTGCCAGGCTCCGCC
GACCGGCGCCTGGAAGAGGCCAACTCGGACATGAGCGGCCTCCTTGACGAGATTGTGGCG
GAGCGGGCGGCGCAGGCGGACAGGGGCCAGCAGAAGAACTTCCTGTCCGTGTTGCTCAAC
GCCAGAGAGAGCACGGAGGCCATGAAGAAGCTGCTCACTCCGGACTACGTGAGCGCGCTC
ACGTACGAGCACCTGCTCGCCGGGTCTGTCACCATGTCGTTCACGCTCTCCAGCCTGGTC
TACCTCGTCGCGATGCACCCGGAGGTGGAGGAGAAGCTGCTTCGGGAGATCGACGCTTTT
GGGCCCAAGGACGTGGTGCCCAGCTCCGACGACCTTGAGACAAAGTTTCCCTACGTTGAA
CAGGTTGTGAAGGAAACAATGAGATTCTACACTGCATCTCCACTGGTTGCAAGGCAAGCA
TCCGAGGATGTTGAGGTTGGAGGGTACCTCCTGCCCAAGGGCACATGGGTGTGGCTGGCG
CCCGGCGTGCTAGCGAAAGATCCCAAGGACTTTCCAGACCCGGACGTATTCCGGCCGGAG
CGTTTCGACCCGGAGAGTGAGGAGTGCAAGCGAAGGCATCCCTACGCGTTCATCCCCTTC
GGCATCGGCCCCCGGGCATGCATCGGCCAGAAGTTTGCCATGCAGCAGCTGAAGCTAGTC
GTCATCCACCTCTACCGCAACTACATCTTCAGGCACTCGCCCAGGATGGAGTTTCCCCTG
CAGTTCCAGTACTCCATTTTGGTCAACTTCAAGTATGGTGTCAAGGTGCAGGTCATCGAG
AGGAAAAACTGATGCACGCATTATTATTATATTAGTGCTATATATTGTATATCTATATGA
TGCAAACAGAATATGCATCTATATATATATGCTGTACACAATATGCATCTATATGCTAGC
TATCCTCCCCTACGTGAAGTGTTGTAATACCGAAATCTTGAAAAAGAAAACTTGATCTGA
AGAGGTTATGACTGCCCCCACAGCATTTCTAATAAGAAGAAGACTTT