Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES03286
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:55858704:55866128:-1 gene:SORBI_3003G222500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCAACGACGCACGCGCTCCGCCTCTGCCCGCTGCTCTCCACCGTCCGATCCACACCG
CCGCGGGCCACTGCCGCAGCCCGCCAGGGCGCCTCGCCAGCGCTCCTCGTCGCCCGCTGC
TCCTCCGCCGGGACGCCGTCAGCCGCCCAGGCGCTCAAGATCAACTCGATCCCGACCAAG
CCAGTTGAGGGGCAGAAGACGGGGACTAGTGGCCTGAGGAAAAAGGTGAAAGTGTTCCAG
CAGGAGAACTACCTTGCTAATTGGATTCAGGCTCTATTCAATTCCTTGCCCCCTGAAGAT
TATGTGGGTGCAACCCTTGTACTTGGGGGTGATGGCCGGTACTTTAATAAGGAGGCTGCT
CAGATCATCATTAAGATTGCAGCTGGAAATGGAGTTCAGAAGATCATTGTCGGCAGGGAT
GGTCTACTGTCAACTCCTGCTGTATCTGCAGTAATTCGTAAAAGAGAAGCCAATGGTGGC
TTCATCATGAGTGCAAGCCATAATCCAGGTGGACCTGACAATGACTGGGGTATTAAGTTT
AACTACAGCAGTGGACAGCCAGCACCGGAGACGATTACTGATCAAATTTATGGGAACACA
CTTTCAATTTCTGAAATAAAAACAGCAGGGATTCCTGATACTGATCTATCCTCTGTTGGA
GTTGTAAGCTATGGAGATTTCACCATAGAAGTGATAGATCCTGTTTCAGATTACCTGGAA
CTAATGGAGAATGTGTTTGACTTCCAACTTATTAAGGATTTGCTTTCTCGGCCTGATTTC
AGGTTCATATTCGATGCGATGCATGCAGTTACTGGTGCGTATGCAGGACCTATTTTTGTT
GAGAAACTTGGAGCTGATCCGGACTGCATATTAAATGGGGTGCCTCTTGAAGATTTTGGA
AATGGCCATCCAGATCCAAATCTAACTTACGCTAAGGAGCTTGTTTTTACCATGTTTGGA
ACCCATGCACCTGACTTTGGTGCAGCAAGTGATGGCGATGGTGATCGGAACATGATTCTT
GGGAAAAGGTTCTTTATTACCCCATCAGACTCTGTTGCAATAATTGCAGCAAATGCACAG
GCAGCAATTCCTTATTTCCAGTTTGGTACAAAAGGACTCGCGAGATCAATGCCAACCAGT
GGTGCTCTTGATCGTGTTGCCAAGAAATTGAATGTTCCATTCTTTGAGGTTCCAACAGGC
TGGAAATTTTTTGGCAACCTAATGGATGCAGGAAAATTGTCTATTTGTGGAGAGGAAAGT
TTTGGGACTGGATCTGATCACATTAGAGAGAAGGATGGCATCTGGGCTGTTCTGGCTTGG
CTTTCCATACTTGCACACCGGAACAAGGATAAGAAGGTCGGAGAGAGATTAGTGTCGGTG
GAAGATATTGCTATGGAGCACTGGAAAACCTATGGCAGGAATTTCTTTTCTAGATATGAT
TATGAGGAGTGTGAATCACAAAGTGCAAACAAGATGATGGATCACCTTAAAGATGTTATT
GCAAATAGCAAGCCTGGAGAGAAATATGGAGATTACACCCTCCAATTTGCTGATGATTTC
AGCTATACTGATCCTGTAGACGGTAGTACGGTATCAAAACAAGGACTTCGATTTGTTTTC
ACTGATGGATCTAGGATTATCTTCCGGCTTTCGGGAACCGGATCTGCTGGAGCTACTATC
CGCCTCTACATAGAACAATTTGAATCTGATATCTCAAAGCATAGTCTCGATGCTCAAACA
GCTCTGAAGCCTTTAATAGACCTGGCTTTGTCTGTTTCAAAGCTCAAGGACTTCACAGGA
AGAGACAAACCTACTGTCATAACATAA

Peptide Sequence

PEP ID

EES03286
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:55858704:55866128:-1 gene:SORBI_3003G222500 transcript:EES03286 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPTTHALRLCPLLSTVRSTPPRATAAARQGASPALLVARCSSAGTPSAAQALKINSIPTK
PVEGQKTGTSGLRKKVKVFQQENYLANWIQALFNSLPPEDYVGATLVLGGDGRYFNKEAA
QIIIKIAAGNGVQKIIVGRDGLLSTPAVSAVIRKREANGGFIMSASHNPGGPDNDWGIKF
NYSSGQPAPETITDQIYGNTLSISEIKTAGIPDTDLSSVGVVSYGDFTIEVIDPVSDYLE
LMENVFDFQLIKDLLSRPDFRFIFDAMHAVTGAYAGPIFVEKLGADPDCILNGVPLEDFG
NGHPDPNLTYAKELVFTMFGTHAPDFGAASDGDGDRNMILGKRFFITPSDSVAIIAANAQ
AAIPYFQFGTKGLARSMPTSGALDRVAKKLNVPFFEVPTGWKFFGNLMDAGKLSICGEES
FGTGSDHIREKDGIWAVLAWLSILAHRNKDKKVGERLVSVEDIAMEHWKTYGRNFFSRYD
YEECESQSANKMMDHLKDVIANSKPGEKYGDYTLQFADDFSYTDPVDGSTVSKQGLRFVF
TDGSRIIFRLSGTGSAGATIRLYIEQFESDISKHSLDAQTALKPLIDLALSVSKLKDFTG
RDKPTVIT

Transcript Sequence

Transcript ID

EES03286
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:55858704:55866128:-1 gene:SORBI_3003G222500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTTTTTTCTCTCTTATCCACGTGGATTGGATCCTGGTGATGAGGTGTCCTGAGTTCCTGA
CTACAGTACAAGCCAATCTAGCGTAGCTTTATTTTACCTGCTCCCCGCCACACAAACCGC
CCCCGCCCGGTCTCGACCACTTCTCTTCTCTCTCGACACTCACTCCCGTGCGTCTCGTGT
CTAGCGCTGACGACGGCGGCGGTGCCACCGGAGCCGGGCAGCGGCCACAATGCCAACGAC
GCACGCGCTCCGCCTCTGCCCGCTGCTCTCCACCGTCCGATCCACACCGCCGCGGGCCAC
TGCCGCAGCCCGCCAGGGCGCCTCGCCAGCGCTCCTCGTCGCCCGCTGCTCCTCCGCCGG
GACGCCGTCAGCCGCCCAGGCGCTCAAGATCAACTCGATCCCGACCAAGCCAGTTGAGGG
GCAGAAGACGGGGACTAGTGGCCTGAGGAAAAAGGTGAAAGTGTTCCAGCAGGAGAACTA
CCTTGCTAATTGGATTCAGGCTCTATTCAATTCCTTGCCCCCTGAAGATTATGTGGGTGC
AACCCTTGTACTTGGGGGTGATGGCCGGTACTTTAATAAGGAGGCTGCTCAGATCATCAT
TAAGATTGCAGCTGGAAATGGAGTTCAGAAGATCATTGTCGGCAGGGATGGTCTACTGTC
AACTCCTGCTGTATCTGCAGTAATTCGTAAAAGAGAAGCCAATGGTGGCTTCATCATGAG
TGCAAGCCATAATCCAGGTGGACCTGACAATGACTGGGGTATTAAGTTTAACTACAGCAG
TGGACAGCCAGCACCGGAGACGATTACTGATCAAATTTATGGGAACACACTTTCAATTTC
TGAAATAAAAACAGCAGGGATTCCTGATACTGATCTATCCTCTGTTGGAGTTGTAAGCTA
TGGAGATTTCACCATAGAAGTGATAGATCCTGTTTCAGATTACCTGGAACTAATGGAGAA
TGTGTTTGACTTCCAACTTATTAAGGATTTGCTTTCTCGGCCTGATTTCAGGTTCATATT
CGATGCGATGCATGCAGTTACTGGTGCGTATGCAGGACCTATTTTTGTTGAGAAACTTGG
AGCTGATCCGGACTGCATATTAAATGGGGTGCCTCTTGAAGATTTTGGAAATGGCCATCC
AGATCCAAATCTAACTTACGCTAAGGAGCTTGTTTTTACCATGTTTGGAACCCATGCACC
TGACTTTGGTGCAGCAAGTGATGGCGATGGTGATCGGAACATGATTCTTGGGAAAAGGTT
CTTTATTACCCCATCAGACTCTGTTGCAATAATTGCAGCAAATGCACAGGCAGCAATTCC
TTATTTCCAGTTTGGTACAAAAGGACTCGCGAGATCAATGCCAACCAGTGGTGCTCTTGA
TCGTGTTGCCAAGAAATTGAATGTTCCATTCTTTGAGGTTCCAACAGGCTGGAAATTTTT
TGGCAACCTAATGGATGCAGGAAAATTGTCTATTTGTGGAGAGGAAAGTTTTGGGACTGG
ATCTGATCACATTAGAGAGAAGGATGGCATCTGGGCTGTTCTGGCTTGGCTTTCCATACT
TGCACACCGGAACAAGGATAAGAAGGTCGGAGAGAGATTAGTGTCGGTGGAAGATATTGC
TATGGAGCACTGGAAAACCTATGGCAGGAATTTCTTTTCTAGATATGATTATGAGGAGTG
TGAATCACAAAGTGCAAACAAGATGATGGATCACCTTAAAGATGTTATTGCAAATAGCAA
GCCTGGAGAGAAATATGGAGATTACACCCTCCAATTTGCTGATGATTTCAGCTATACTGA
TCCTGTAGACGGTAGTACGGTATCAAAACAAGGACTTCGATTTGTTTTCACTGATGGATC
TAGGATTATCTTCCGGCTTTCGGGAACCGGATCTGCTGGAGCTACTATCCGCCTCTACAT
AGAACAATTTGAATCTGATATCTCAAAGCATAGTCTCGATGCTCAAACAGCTCTGAAGCC
TTTAATAGACCTGGCTTTGTCTGTTTCAAAGCTCAAGGACTTCACAGGAAGAGACAAACC
TACTGTCATAACATAATCTCTAGATGTTCATGACATCAGCTCCTTCGCTATTTTCTTCAT
TTCTTTTTGTTGTCCTCGGTGGCTCGGTCATACCAACAGAGTAGCATGGGTGTACGGTAG
GTCGGTAGGCCATGTTTTTGAATTGAACTGATGGCAAATATGTATCATTAGGACAAACTC
CGCCAGAATAAATTGTTTCCCGGAAGTGTTGCAACATCTTCCAAATACTTCTCCTCCAAT
AAGATGGTAATGGGATAACATGTTGCAGAACTGTGCAAATTATGCCT