Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES03221
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:53969462:53971899:-1 gene:SORBI_3003G208500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGACGCCGACGGCGGCGGCGAACACGAAGGCCCCATGACGTACGCCCAGGCACAGCAG
TTCTTCACGTCCATGGAGGGCCCGACAGCGCAGGAGCGCATCGACTACATCTTCGCCTCC
CTCATCTCCCTCCTGCCGCGACCCTTCGTCCCCGCCCCCGAGGTCGCCGGCGACGACTCC
GACTCCGACTCCGAACACGAGCGCTTCTCCCTCACCTCCTCCGACTCCTCGGAGGCCTCG
GGCGGCGTCGGCGCGGACCCCGCCGCCGCGTTCCATCCGGCGGCGGTCGGCGACGGCGAG
GACCACATCAGCCACCTCCCGGACGCGCTCCTCTCCAACATCATCTCGCGCCTCACCACC
AAGGAGGCCGCGCGCACCGCCGTCCTCTCCACGCGCTGGGGCGGCGTCTGGGCCGCCACC
CCGCTCCTCGTCGACGACGCCCACTTCTTCGGCGCCGACCGGCACTCCGACATCCCCATC
ATGCGCGCCGTGTCGCGCTGCGTCGCCGCGCACCCTGGCCCCGTCCGCGCCGTGCGCGTC
ACCCGCGTCTCCTTCCACGCCAACGAGTACCCGCTACAGCGCCTGGTCGCGGACCTCGCC
GACAAGGACGTCAAGGACCTCATCCTCTTCAACCGCCCGTGGCCGCTCAACATGCCGCTC
CCTGTGGACATCCTCCGCTGCGCCTCCCTCGAGCGCCTCTACCTCGGCGTGTGGCACTTC
CCGGAGATCACCGCAGCTCGCCCCTCCGTGTTTCACGAGCTCCGCGAGCTTGGCCTCTTC
CACTGCGTTGTCCGCGACAAAGATTTGGACACCCTGCTCGCGCACTGCCCGAAGCTCGAG
ATCTTCTCCATCGTCATGTCCTACGGCGCACCGTCACGCCTCCGCATCGTGTCCCCCAGC
CTCCGTGTTGCGGTGGATTGGCAATCCACCCTCCGTGAGGTCTCTGTTGAAGACGCTCCC
TGCCTCGAGCGGATGATCTTCCACACCATTGAAACAAGGAGGTCCATCAAGATTGTTAGC
GCACCTAGGCTGCAAGTGCTCGGCTTCCTCAACCTCAACTTACATAAGCTGGAGATTGGT
GGCACTGCAATCAGGGCCGGGATGAACGTGGGGGCCAGGGCCATGGTTCCGAGCTTGAAA
ATACTCGCTGTGACTCTTCAGTTTGCATGCAACCAGGAGGCCAAAATGTTGCCCACCCTA
CTCAAATGCTTTCCTCACCTGGAGAAGCTGCATGTCCTGGCCATTCCATCCAAGCCCCCT
AGCAGTGCCCATGGTCTAGAGTTCTGGGAATCCCTGGATTCTTGCGAGTGCCTTCGGTTG
CGTCTGAACACTCTCAATGTTTATGGGTGCCTGGTGCAGACAAACGAGATCGGGTTCCTG
CAGTACATGATCAGAGAGGGGAAAGCACTCAGGGCTGTGGGCCTTTGCCCCTCACCTAAT
AACAAGGTGGCGATGGACTTGGTCTTAGCTTCTTTTGAGAGCAAGGAAGCATCTTTTGTT
GAGAGCAAGAGATCATCAAGAGGTGGAAGCAGTGCTGATGTTATCCTTGCCGAAATCAAT
GGTAGCCAGATCTTCCAAAATGCCATCGACATGTCAATAGATGACCCCTTCTTCTCGGAC
AACATTCCACTTTGA

Peptide Sequence

PEP ID

EES03221
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:53969462:53971899:-1 gene:SORBI_3003G208500 transcript:EES03221 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDADGGGEHEGPMTYAQAQQFFTSMEGPTAQERIDYIFASLISLLPRPFVPAPEVAGDDS
DSDSEHERFSLTSSDSSEASGGVGADPAAAFHPAAVGDGEDHISHLPDALLSNIISRLTT
KEAARTAVLSTRWGGVWAATPLLVDDAHFFGADRHSDIPIMRAVSRCVAAHPGPVRAVRV
TRVSFHANEYPLQRLVADLADKDVKDLILFNRPWPLNMPLPVDILRCASLERLYLGVWHF
PEITAARPSVFHELRELGLFHCVVRDKDLDTLLAHCPKLEIFSIVMSYGAPSRLRIVSPS
LRVAVDWQSTLREVSVEDAPCLERMIFHTIETRRSIKIVSAPRLQVLGFLNLNLHKLEIG
GTAIRAGMNVGARAMVPSLKILAVTLQFACNQEAKMLPTLLKCFPHLEKLHVLAIPSKPP
SSAHGLEFWESLDSCECLRLRLNTLNVYGCLVQTNEIGFLQYMIREGKALRAVGLCPSPN
NKVAMDLVLASFESKEASFVESKRSSRGGSSADVILAEINGSQIFQNAIDMSIDDPFFSD
NIPL

Transcript Sequence

Transcript ID

EES03221
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:53969462:53971899:-1 gene:SORBI_3003G208500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTCGTCGGTGCCTCGGTGGACTCTGGACAGTGGCACCGGTCCAGCAGCCCCTCTCCGCAA
GCGTGCTCTCGCTACCGTCTCCCTTCCCAAACCCCCATTCCCCAACGTCAAACCCTACTC
CGATCGCCGCCATGGACGCCGACGGCGGCGGCGAACACGAAGGCCCCATGACGTACGCCC
AGGCACAGCAGTTCTTCACGTCCATGGAGGGCCCGACAGCGCAGGAGCGCATCGACTACA
TCTTCGCCTCCCTCATCTCCCTCCTGCCGCGACCCTTCGTCCCCGCCCCCGAGGTCGCCG
GCGACGACTCCGACTCCGACTCCGAACACGAGCGCTTCTCCCTCACCTCCTCCGACTCCT
CGGAGGCCTCGGGCGGCGTCGGCGCGGACCCCGCCGCCGCGTTCCATCCGGCGGCGGTCG
GCGACGGCGAGGACCACATCAGCCACCTCCCGGACGCGCTCCTCTCCAACATCATCTCGC
GCCTCACCACCAAGGAGGCCGCGCGCACCGCCGTCCTCTCCACGCGCTGGGGCGGCGTCT
GGGCCGCCACCCCGCTCCTCGTCGACGACGCCCACTTCTTCGGCGCCGACCGGCACTCCG
ACATCCCCATCATGCGCGCCGTGTCGCGCTGCGTCGCCGCGCACCCTGGCCCCGTCCGCG
CCGTGCGCGTCACCCGCGTCTCCTTCCACGCCAACGAGTACCCGCTACAGCGCCTGGTCG
CGGACCTCGCCGACAAGGACGTCAAGGACCTCATCCTCTTCAACCGCCCGTGGCCGCTCA
ACATGCCGCTCCCTGTGGACATCCTCCGCTGCGCCTCCCTCGAGCGCCTCTACCTCGGCG
TGTGGCACTTCCCGGAGATCACCGCAGCTCGCCCCTCCGTGTTTCACGAGCTCCGCGAGC
TTGGCCTCTTCCACTGCGTTGTCCGCGACAAAGATTTGGACACCCTGCTCGCGCACTGCC
CGAAGCTCGAGATCTTCTCCATCGTCATGTCCTACGGCGCACCGTCACGCCTCCGCATCG
TGTCCCCCAGCCTCCGTGTTGCGGTGGATTGGCAATCCACCCTCCGTGAGGTCTCTGTTG
AAGACGCTCCCTGCCTCGAGCGGATGATCTTCCACACCATTGAAACAAGGAGGTCCATCA
AGATTGTTAGCGCACCTAGGCTGCAAGTGCTCGGCTTCCTCAACCTCAACTTACATAAGC
TGGAGATTGGTGGCACTGCAATCAGGGCCGGGATGAACGTGGGGGCCAGGGCCATGGTTC
CGAGCTTGAAAATACTCGCTGTGACTCTTCAGTTTGCATGCAACCAGGAGGCCAAAATGT
TGCCCACCCTACTCAAATGCTTTCCTCACCTGGAGAAGCTGCATGTCCTGGCCATTCCAT
CCAAGCCCCCTAGCAGTGCCCATGGTCTAGAGTTCTGGGAATCCCTGGATTCTTGCGAGT
GCCTTCGGTTGCGTCTGAACACTCTCAATGTTTATGGGTGCCTGGTGCAGACAAACGAGA
TCGGGTTCCTGCAGTACATGATCAGAGAGGGGAAAGCACTCAGGGCTGTGGGCCTTTGCC
CCTCACCTAATAACAAGGTGGCGATGGACTTGGTCTTAGCTTCTTTTGAGAGCAAGGAAG
CATCTTTTGTTGAGAGCAAGAGATCATCAAGAGGTGGAAGCAGTGCTGATGTTATCCTTG
CCGAAATCAATGGTAGCCAGATCTTCCAAAATGCCATCGACATGTCAATAGATGACCCCT
TCTTCTCGGACAACATTCCACTTTGATCCTCGGACAACATTCCACTTTCATGTTCCTGAT
GCTGCTGTTGATGCTTTGTTACTGCACATTCATAATTTGGCTAGGGATTTTATGACTTTT
ATTCTACTTATTCAAGAGGTTTTAGTGAATTCAGCATGGGGAGAAACTTAGACATGGGTG
CCTGAAAGCAAGTTTATTGCATCTAATTCTGAGTTATGCTTCTGTTGAGACAAACTATTA
TTTTGAGTTTGCCAAGTACCTTTTCTGTATGTTGATTTGGTCACTTTTGCCTATGAAGTA
CTTGTATGCGTGCAATCTATCTGAAACTGCTATTTGTTTAGAACTACGGATGGCAGTTCC
AGGTAGTTCTTTTGCTATCGATTTGACCAATTAGCTAGTTCATGAAATGCATTCATACAT
TTCTATCTGTGTTGCATATTTCACT