Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES03187
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:53109856:53115116:-1 gene:SORBI_3003G201700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGGAAGCAGCAGCAGGAGGGGAAGCGGCGCCGCGGGGAGAAGGACGGGAAGCGGAAA
GGGACGGGGAAGGCGGCGGCGGCGGCGGTGGCGGTGGTGAAGGTGCCGGAGGACGCGGCG
CCAGTGACCGGGTGCTGGATCCGCTTCCCGCGCCTGCGCCTCCGCGGCTGCATGTCGTCG
CGCGCCAAGGTCGACTCCTCCACCAGCGCGCGTCGCGGCGGCGGCGGCGGCGGGGAAACC
AAACCAGTGCCTGATGATGGTTGCCAGGACCAATCAGTCCCACCAGCCTCTGGTTCCACA
ACAACCAGTAACACCGGAAGTATCTCACCTTCTTCCATAGTTGGAGAGGAGCTAAAACTA
GCTTTCCAACTGCGTAGATTTACTTTTAATGAACTGAAGTGTGCCACAAGAAACTTCCGA
CCTGAGAGTCTTCTTGGTGAGGGAGGTTTTGGCTGTGTCTTTAAAGGATGGATTGAGGAG
AATGGAACTGCTCCTGTTAAGCCAGGCACTGGATTAACTGTTGCTGTCAAGACACTTAAC
CATGATGGGTTGCAGGGGCATAAAGAGTGGGTGGCAGAAGTTGATTTTCTTGGAAACCTT
CAGCATCCACATCTAGTGAAATTGGTTGGCTACTGCATTGAAGATGACCAAAGGTTGCTT
GTGTATGAATTTATGCCCCGTGGAAGTTTGGAGAATCATCTTTTTAGAAAGTCATTGCCT
CTCCCATGGGCCATTAGAATGAAAATTGCTCTTGGTGCTGCCAAAGGCCTTGCTTTTCTT
CATGAAGAAGCTGAAAGACCAGTAATATATCGGGACTTCAAAACATCCAATATTCTTTTA
GATGCGGACTATAATGCAAAACTCTCTGATTTTGGACTTGCTAAAGATGGACCTGAGGGT
GATAAAACGCATGTGTCAACTAGGGTCATGGGAACATATGGATATGCTGCGCCTGAATAT
GTAATGACAGGTCACCTGACATCAAAGAGTGATGTATATAGCTTTGGTGTGGTACTACTA
GAGATGATGACTGGTAGAAGGTCAATGGACAAGAACAGGCCAAATGGAGAACACAACCTG
GTTGAATGGGCACGCCCTTATCTGGGAGAAAGGCGCAGATTCTATAAGCTTGTAGATCCT
CGTTTGGATGGGAACTTCTCCATAAAAGGTGCTCAGAAGACGGCTCAGCTGGCCCATGCC
TGCCTCAGCCGTGACCCCAAGGCTAGGCCTCTGATGAGCCAAGTGGTGGAGGTTCTGAAG
CCTCTCCAGAACCTCAAGGACATGGCCAGCTCTTCCTACTTCTTCCAGTCCATGCAACAT
GAGCGGCGCACAACCCTTGCCAACCCACATGGCAGTCAAAGCATGAAAGCGCAGAGTACC
TTTGCGCGGAACGGGCAGCAGCCCATGAGGAGCCTCTCGTATGGCCCTCATGCTTCCCCG
TATCGCCAGTCGCCAAGGCTTGACAGCAAGCGGCAATGA

Peptide Sequence

PEP ID

EES03187
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:53109856:53115116:-1 gene:SORBI_3003G201700 transcript:EES03187 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGKQQQEGKRRRGEKDGKRKGTGKAAAAAVAVVKVPEDAAPVTGCWIRFPRLRLRGCMSS
RAKVDSSTSARRGGGGGGETKPVPDDGCQDQSVPPASGSTTTSNTGSISPSSIVGEELKL
AFQLRRFTFNELKCATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN
HDGLQGHKEWVAEVDFLGNLQHPHLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKSLP
LPWAIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEG
DKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMMTGRRSMDKNRPNGEHNL
VEWARPYLGERRRFYKLVDPRLDGNFSIKGAQKTAQLAHACLSRDPKARPLMSQVVEVLK
PLQNLKDMASSSYFFQSMQHERRTTLANPHGSQSMKAQSTFARNGQQPMRSLSYGPHASP
YRQSPRLDSKRQ

Transcript Sequence

Transcript ID

EES03187
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:53109856:53115116:-1 gene:SORBI_3003G201700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCGTCCCGTCCCGTTCCCCGGCCACGGTCTTCGCCAAATTCCCACGCCCCTGCCCAGCCT
GCCCGAATCCTCGCGCTTTACCCTGCCCGCTCTGCCCCCCATTCACACTCTCGCTGCTCC
GCTCGGCTCGTCGGGACGCGCCCCTCCGCCTCGCCATGATGCCCGCCCACGCGCTCGCCG
GAGGCCGCGCGCGGCGGCTTCCCATTCCGCAACGCTGACGAGAGTGTCTCTCAGCGGGGG
TGTTTCAGGCGTTCATTTGGTTCGGGAAGAGGGGGGAGTGCGGCGATGGGGAAGCAGCAG
CAGGAGGGGAAGCGGCGCCGCGGGGAGAAGGACGGGAAGCGGAAAGGGACGGGGAAGGCG
GCGGCGGCGGCGGTGGCGGTGGTGAAGGTGCCGGAGGACGCGGCGCCAGTGACCGGGTGC
TGGATCCGCTTCCCGCGCCTGCGCCTCCGCGGCTGCATGTCGTCGCGCGCCAAGGTCGAC
TCCTCCACCAGCGCGCGTCGCGGCGGCGGCGGCGGCGGGGAAACCAAACCAGTGCCTGAT
GATGGTTGCCAGGACCAATCAGTCCCACCAGCCTCTGGTTCCACAACAACCAGTAACACC
GGAAGTATCTCACCTTCTTCCATAGTTGGAGAGGAGCTAAAACTAGCTTTCCAACTGCGT
AGATTTACTTTTAATGAACTGAAGTGTGCCACAAGAAACTTCCGACCTGAGAGTCTTCTT
GGTGAGGGAGGTTTTGGCTGTGTCTTTAAAGGATGGATTGAGGAGAATGGAACTGCTCCT
GTTAAGCCAGGCACTGGATTAACTGTTGCTGTCAAGACACTTAACCATGATGGGTTGCAG
GGGCATAAAGAGTGGGTGGCAGAAGTTGATTTTCTTGGAAACCTTCAGCATCCACATCTA
GTGAAATTGGTTGGCTACTGCATTGAAGATGACCAAAGGTTGCTTGTGTATGAATTTATG
CCCCGTGGAAGTTTGGAGAATCATCTTTTTAGAAAGTCATTGCCTCTCCCATGGGCCATT
AGAATGAAAATTGCTCTTGGTGCTGCCAAAGGCCTTGCTTTTCTTCATGAAGAAGCTGAA
AGACCAGTAATATATCGGGACTTCAAAACATCCAATATTCTTTTAGATGCGGACTATAAT
GCAAAACTCTCTGATTTTGGACTTGCTAAAGATGGACCTGAGGGTGATAAAACGCATGTG
TCAACTAGGGTCATGGGAACATATGGATATGCTGCGCCTGAATATGTAATGACAGGTCAC
CTGACATCAAAGAGTGATGTATATAGCTTTGGTGTGGTACTACTAGAGATGATGACTGGT
AGAAGGTCAATGGACAAGAACAGGCCAAATGGAGAACACAACCTGGTTGAATGGGCACGC
CCTTATCTGGGAGAAAGGCGCAGATTCTATAAGCTTGTAGATCCTCGTTTGGATGGGAAC
TTCTCCATAAAAGGTGCTCAGAAGACGGCTCAGCTGGCCCATGCCTGCCTCAGCCGTGAC
CCCAAGGCTAGGCCTCTGATGAGCCAAGTGGTGGAGGTTCTGAAGCCTCTCCAGAACCTC
AAGGACATGGCCAGCTCTTCCTACTTCTTCCAGTCCATGCAACATGAGCGGCGCACAACC
CTTGCCAACCCACATGGCAGTCAAAGCATGAAAGCGCAGAGTACCTTTGCGCGGAACGGG
CAGCAGCCCATGAGGAGCCTCTCGTATGGCCCTCATGCTTCCCCGTATCGCCAGTCGCCA
AGGCTTGACAGCAAGCGGCAATGAGTCATGGTGCTTGTTTGTCGACCATAACATATTTCA
AGACTGAAGTTGGTAACCACAACTGGTGTATGAACTTAACCATCCAGCACCTCCATAGCA
TCTAAGCTCCTAATATTGTGGATGAAGCAGCAACAATGATTCGAATTTTGCATATTATCT
GCGGTTGTGATTTTTTTTTCTTGTTATCGCTTAGATTTAGCTGTCCTATCTCTACAGCTC
TAGATACCTTGACTTGAAAGGTGGGACTAAACAGGGTTTTGACCGGTCTTTGAAACAATG
CTCAGGCAGCAGATGCTTGGGATTTGTTCCTTCCTGGAAACCATCAGTAGGTAAGTCTGA
TAAGTCTGTTTTGCTACTCTTTGATCTGTTATTTAAACTGTCGGTTGCTTTGTAATTAAT
TGTCATGTGGAGAAA