Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES03100
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:48914545:48917277:-1 gene:SORBI_3003G183800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGGCGCGAGGCGGCGGCAACGAGGCCCAAGCTGCGGAGGGGTCTTTGGTCGCCGGAG
GAGGACGAGAAGCTCTACAATCACATCATCCGATATGGCGTCGGCTGCTGGAGCTCAGTC
CCAAAGCTCGCAGGCTTGGAGAGATGCGGCAAGAGCTGCAGGCTGAGATGGATCAACTAC
CTGAGGCCTGACCTCAAGAGGGGCAGCTTCTCCCAGCAGGAGGAGGATCTCATCATCAGC
CTCCACAAGATACTAGGCAACAGGTGGTCCCAGATCGCATCGCAGCTGCCGGGGCGGACG
GACAACGAGATTAAAAACTTCTGGAACTCGTGCATCAAGAAGAAGCTCCGGCAGCGGGGC
ATCGACCCGGCCACGCACAAGCCGCTCAACGACGACGACGACGTCGTCGTCGCCGCGGAC
GACAACACCGTGGCGCCGCATCGTCATCAGGACGACAAGAAGCTCGCCTCATCAACCGAC
GACCAATGTTTCGCCGCTATGGGCGCCGCCGCCGCCAGCAGCGACGACCCTCTCGCGCCA
CACTCCCCGACCGTCAGCTTCGACCCACTTTCCGTGACCAACGTCCCGACAATGCAGCAG
GGCTCCTACGGCGCCGCGCACTCCTTCGGCCGGTCCGACAACCACCTCTGCGACTACGGC
GGCGTGGACGTGGTCTCCGACGCAGCGACGACGTATAGCGCCTACACAGGCGGCGGCGAC
AGCTCCAGCAACAGCAACGGAACCTGGACCTGCGGCGGCAACAATGTTGTCGGCGGCGAC
CCGATGCCGCCGCACATGGACATGTTCGGCCGCGATGCCGAGGCGGTGTACCAGCAGTTC
GACCCGGCCAAGTACAGCCCCTGGCAGCACCAGCAGCAGCACCCGGCGGCGGCGAGGTTC
GATGGTCACAACGTCAGCAGCGGCGGCGCTGCTGCGGGCTTCCTAATCCGGCGGGACCTG
CCGGATTCCTGCTTCGACCTCGCCCGTAGCGCGCTGGAGGACGAGTTCAGCGTCGACTTC
CTCTAG

Peptide Sequence

PEP ID

EES03100
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:48914545:48917277:-1 gene:SORBI_3003G183800 transcript:EES03100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGREAAATRPKLRRGLWSPEEDEKLYNHIIRYGVGCWSSVPKLAGLERCGKSCRLRWINY
LRPDLKRGSFSQQEEDLIISLHKILGNRWSQIASQLPGRTDNEIKNFWNSCIKKKLRQRG
IDPATHKPLNDDDDVVVAADDNTVAPHRHQDDKKLASSTDDQCFAAMGAAAASSDDPLAP
HSPTVSFDPLSVTNVPTMQQGSYGAAHSFGRSDNHLCDYGGVDVVSDAATTYSAYTGGGD
SSSNSNGTWTCGGNNVVGGDPMPPHMDMFGRDAEAVYQQFDPAKYSPWQHQQQHPAAARF
DGHNVSSGGAAAGFLIRRDLPDSCFDLARSALEDEFSVDFL

Transcript Sequence

Transcript ID

EES03100
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:48914545:48917277:-1 gene:SORBI_3003G183800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATTATATTGCTGCCGATGGATCGATGGAGTTTGTTGTCGCATCGTGGGATTATTGTACTT
GATCGCCTCTCTTCCCCGCACCTCAAGCTACCTGCTTTATTTCCTTAAATCTCCTCCAAC
CCAACCCCATCCATCCATTAGCCCACGGGGGCCTTGTGCCCTTACCTTACCTTGCTTCAA
CCTCACTTTATTAGTAGCTAGCTAGAGTGCCCGGCCTCTCTCTCTCTCTCTCTCTCATTC
GATCTTGCTCGCAGACAGTGAGACAGACTGGTTGCTGCTTTTCTTGCCCCTTTTATTTAG
TTACAAGCTATAGTTTCTTCAGCTCCACTTTAATAAGATGATCGCAGTCTGTTATCTCTA
GCTTACATCTCAAGCATCGAACTGCCTGCTGTCCCCTGCTCAGAGAGCTAAGCTGAGCTT
GAGCTGAGCTGCTGAGATAGCGAGCCAACCGTCGCTTTTAATTTATATCGCCCGCCAGCG
CGCCAGGCCGTCTCATAATCATTGTTGCCATCACCTGCCGCTAACTGGCGGCTGCTGCTG
CTGCTGCTGCTGCTCTGCGCCCTGCGGTACTAGTCTCGAAGAAACTGATCCATGATCTGA
TCCCACAGCACAAGTCGGGCTTGGCAGGCGCGCGCGCGGTGCGCGGTGGGCAAAGAGCAG
CTTAGAGCGTGTAAGTTGCCCGGCCAGCCGCCGGCCTCGCTAGCTGCCCCATCCAACCGA
GATCGATCCATGGGGCGCGAGGCGGCGGCAACGAGGCCCAAGCTGCGGAGGGGTCTTTGG
TCGCCGGAGGAGGACGAGAAGCTCTACAATCACATCATCCGATATGGCGTCGGCTGCTGG
AGCTCAGTCCCAAAGCTCGCAGGCTTGGAGAGATGCGGCAAGAGCTGCAGGCTGAGATGG
ATCAACTACCTGAGGCCTGACCTCAAGAGGGGCAGCTTCTCCCAGCAGGAGGAGGATCTC
ATCATCAGCCTCCACAAGATACTAGGCAACAGGTGGTCCCAGATCGCATCGCAGCTGCCG
GGGCGGACGGACAACGAGATTAAAAACTTCTGGAACTCGTGCATCAAGAAGAAGCTCCGG
CAGCGGGGCATCGACCCGGCCACGCACAAGCCGCTCAACGACGACGACGACGTCGTCGTC
GCCGCGGACGACAACACCGTGGCGCCGCATCGTCATCAGGACGACAAGAAGCTCGCCTCA
TCAACCGACGACCAATGTTTCGCCGCTATGGGCGCCGCCGCCGCCAGCAGCGACGACCCT
CTCGCGCCACACTCCCCGACCGTCAGCTTCGACCCACTTTCCGTGACCAACGTCCCGACA
ATGCAGCAGGGCTCCTACGGCGCCGCGCACTCCTTCGGCCGGTCCGACAACCACCTCTGC
GACTACGGCGGCGTGGACGTGGTCTCCGACGCAGCGACGACGTATAGCGCCTACACAGGC
GGCGGCGACAGCTCCAGCAACAGCAACGGAACCTGGACCTGCGGCGGCAACAATGTTGTC
GGCGGCGACCCGATGCCGCCGCACATGGACATGTTCGGCCGCGATGCCGAGGCGGTGTAC
CAGCAGTTCGACCCGGCCAAGTACAGCCCCTGGCAGCACCAGCAGCAGCACCCGGCGGCG
GCGAGGTTCGATGGTCACAACGTCAGCAGCGGCGGCGCTGCTGCGGGCTTCCTAATCCGG
CGGGACCTGCCGGATTCCTGCTTCGACCTCGCCCGTAGCGCGCTGGAGGACGAGTTCAGC
GTCGACTTCCTCTAGCTGACGGCTCCGCCGGCCGAGAGGTCGTTGATGCACATGTCGTTG
ACGTCCGAGGTCCAACACTCACTCGACACTCGACAGACACACACAGATACACTTCATTCA
CTACTACTACTACCTCCTCAGAAGCAAGATCATATCACCCAACAAAAGACACTCCTGAAG
CATCTTTGTCTGGCATGTTCGTTCGTTATTTTTTTTCCTTTTTCTCGTTTCATCAGGTCC
GGTCATACTTATCTGGACCGATCGATCAAGTTGTTTAATTAACATGTTGGTGGTATGGTA
TACTGTGTTTATAATAAGGGTTTTATATATATTATACATACTATATATAGACCTCAACTA
TATTCATGGGAACCATATATTTTGTCATTGGAAGTACATAGCCTAAATTTGAGCTATATA
TATTAATTATTTCGATGTCTGTTCACAATGCAAGGTGCCCATTGCAAGAGCTTGCACTGT
TGCATGACTTGCACACACACACACACGCACACACCAGAATGCTGTCGTGATGTCGTCGTT
CCGTCCACACACCACACTGGTTTAGGAGGAG