Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES03041
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:42068917:42072321:-1 gene:SORBI_3003G174700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGCTCCTCCGTCTTCTGCTCCTCCATCTCGCCGTCTCCGCCGCCGCCGACGCGCTC
ACGCCGGACGGCCAGGCGCTGCTCGCGTTCAAGGCGGCCGTCCTGCAAGACCCCACGGGG
GCGCTCGCCAACTGGGACGCCACCGCCGCGGACCCCTGCGCCTGGAACGGGGTCGCCTGC
TCCTCCCCTGACCCGGGCTCCGGCTCCGCCCAGCCCCGTCGCGTCGTCGCGCTCTCCCTC
CCTAAGAAGCTCCTCGTCGCGGCGCTCCCTAGGTCCCCGCTCCCGTCCTCGCTCCGCCAC
CTCAACCTTCGCAGCAACCGCCTCTTCGGGCCCGTCCCACCCGAGCTCGTCGCAGGTGCG
CCCGCGCTCCAGAGCCTCGTCCTCTACGGGAACGCGCTCGACGGCCAGCTCCCCGAGGAC
CTCGGGGACCTGGCCTACCTCCAGATCCTCGACCTCTCCTCCAACGCCATCAACGGCTCC
CTCCCGACCTCGATCCTCAAATGCCGCAGGCTCCGCGCGCTCGCGCTCGCGCGCAACAAC
CTCACGGGCTCGCTCCCCGCCGGGTTCGGCGCCCAGCTCACCGCGCTGGAACGGCTCGAC
CTCTCCTTCAACGGCTTCTCCGGCACCATCCCGGAGGACATCGGGAACCTGTCCAGGCTC
CAGGGGACGGTCGACCTCTCGCACAACCACTTCTCGGGCCCCATCCCGGCGACCCTTGGG
AGGCTGCCGGAGAAGGTCTACATCGATCTCACCTACAACAACCTCTCCGGTCCTATCCCG
CAGAACGGGGCGCTGGAGAACCGGGGCCCCACGGCGTTCGTTGGCAACCCGGGCCTCTGC
GGGCCGCCGCTTAAGAACCCCTGCGCGCCGTCGTCCAACCCTTCCCTGTCCAATGACGGA
GGCGACTCGTCGGCACCCGAGGCAGCCGGTGGTGGCAAGGGGAAGAACAAGGGGCTGGGG
AAGATTGCCATTGTGGCCATCGTGCTCAGTGATGTTGTGGTGATTTTGATCATTGCACTG
GTGTTCTTCTACTGCTACTGGAGGGTGGTTTCATCCAAAGACAGGAGCAAGGGGCACGGT
GCGGCTGCTGGTTCTAAAGGGTCCAGGTGTGGCAAGGATTGTGGATGTTTCAGCAGGGAT
GAGTCTGAAACTCCATCTGAGCATGCGGAGCAGTACGATCTCGTGGCATTGGACCCGCAT
GTGAGGTTTGATCTGGATGAGCTGCTCAAGGCATCAGCTTTTGTGCTGGGGAAGAGTGGG
ATTGGAATCGTTTATAAAGTGGTTCTTGAGGACGGGCTCACAATGGCAGTTAGGCGGCTT
GGGGAGGGGGGACTGCAGAGGTTTAAGGAGTTTCAGACTGAGGTTGAGGCAATTGGCAAG
GTCCGGCATCCCAACATTGTTACCTTGAGGGCTTATTACTGGTCTTTTGATGAGAAGCTG
CTGATATATGATTATATTCCTAATGATAGCCTCTCTGCTGCAATTCATGGTAAACCTGGG
GTGACGACATTCACCCCGTTGCCATGGGAAGCCCGAGTAAAGATCATGAAAGGAGTTGCC
AAGGGAATGTCTTTCCTGCATGAATTCAGCCCCAAAAAGTATGTCCATGGTGACTTGAGG
CCAAACAATGTCCTCCTTGGAACAAATATGGAGCCGTTAATTTCAGATTTTGGCCTTGGG
CGACTTGCAAACATTGCTGGAGCATCACCATTTGTGCAATCAGATCGAGTTGGTTTAGAA
AAGGAACAGAGCCAGCAATCAGATGCCTCAGTGAGCCCTCTCATGAGCAAAGGGTCATGC
TATCAAGCTCCGGAGGCGCTGAAGACACTAAAGCCCTCGCAGAAATGGGACGTTTACTCC
TATGGTGTGGTGTTACTTGAAATGATCACTGGCCGATCACCCTCTATTCTCTTGGAAACC
ATGCAAATGGATCTTGTTCAATGGGTCCAATTCTGCATCGAAGACAAGAAACCATCTGCC
GATGTGCTGGACCCTTTCCTTGCCCAAGATTCGGAACAGGAGGATGAGATGATCACAGTG
CTGAAAGTTGCCCTCGCATGCGTTCAGGCGAATCCTGAGCGGAGGCCATCAATGAGGCAT
GTTGCGGAGACCTTGGAGCGCCTCAATGGTTCAAGCTAG

Peptide Sequence

PEP ID

EES03041
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:42068917:42072321:-1 gene:SORBI_3003G174700 transcript:EES03041 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MALLRLLLLHLAVSAAADALTPDGQALLAFKAAVLQDPTGALANWDATAADPCAWNGVAC
SSPDPGSGSAQPRRVVALSLPKKLLVAALPRSPLPSSLRHLNLRSNRLFGPVPPELVAGA
PALQSLVLYGNALDGQLPEDLGDLAYLQILDLSSNAINGSLPTSILKCRRLRALALARNN
LTGSLPAGFGAQLTALERLDLSFNGFSGTIPEDIGNLSRLQGTVDLSHNHFSGPIPATLG
RLPEKVYIDLTYNNLSGPIPQNGALENRGPTAFVGNPGLCGPPLKNPCAPSSNPSLSNDG
GDSSAPEAAGGGKGKNKGLGKIAIVAIVLSDVVVILIIALVFFYCYWRVVSSKDRSKGHG
AAAGSKGSRCGKDCGCFSRDESETPSEHAEQYDLVALDPHVRFDLDELLKASAFVLGKSG
IGIVYKVVLEDGLTMAVRRLGEGGLQRFKEFQTEVEAIGKVRHPNIVTLRAYYWSFDEKL
LIYDYIPNDSLSAAIHGKPGVTTFTPLPWEARVKIMKGVAKGMSFLHEFSPKKYVHGDLR
PNNVLLGTNMEPLISDFGLGRLANIAGASPFVQSDRVGLEKEQSQQSDASVSPLMSKGSC
YQAPEALKTLKPSQKWDVYSYGVVLLEMITGRSPSILLETMQMDLVQWVQFCIEDKKPSA
DVLDPFLAQDSEQEDEMITVLKVALACVQANPERRPSMRHVAETLERLNGSS

Transcript Sequence

Transcript ID

EES03041
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:42068917:42072321:-1 gene:SORBI_3003G174700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGTTTTCGCGAGCAGCGACCGCCCTTTGCGCTTGGGTTTGGCAGTGGCCAGTGGGGTGCA
GTCATCAGTCAAACCTTCCACCCACACACACCGCGACACCAGCGGGCAGCCCCGTCCCTT
CCTCCGCACACTCTCCGGAGTCCGGAGTCCCAGACTGCCCACTCGTCCGCCACCCAACGC
GGACTCGCCATGGCGCTCCTCCGTCTTCTGCTCCTCCATCTCGCCGTCTCCGCCGCCGCC
GACGCGCTCACGCCGGACGGCCAGGCGCTGCTCGCGTTCAAGGCGGCCGTCCTGCAAGAC
CCCACGGGGGCGCTCGCCAACTGGGACGCCACCGCCGCGGACCCCTGCGCCTGGAACGGG
GTCGCCTGCTCCTCCCCTGACCCGGGCTCCGGCTCCGCCCAGCCCCGTCGCGTCGTCGCG
CTCTCCCTCCCTAAGAAGCTCCTCGTCGCGGCGCTCCCTAGGTCCCCGCTCCCGTCCTCG
CTCCGCCACCTCAACCTTCGCAGCAACCGCCTCTTCGGGCCCGTCCCACCCGAGCTCGTC
GCAGGTGCGCCCGCGCTCCAGAGCCTCGTCCTCTACGGGAACGCGCTCGACGGCCAGCTC
CCCGAGGACCTCGGGGACCTGGCCTACCTCCAGATCCTCGACCTCTCCTCCAACGCCATC
AACGGCTCCCTCCCGACCTCGATCCTCAAATGCCGCAGGCTCCGCGCGCTCGCGCTCGCG
CGCAACAACCTCACGGGCTCGCTCCCCGCCGGGTTCGGCGCCCAGCTCACCGCGCTGGAA
CGGCTCGACCTCTCCTTCAACGGCTTCTCCGGCACCATCCCGGAGGACATCGGGAACCTG
TCCAGGCTCCAGGGGACGGTCGACCTCTCGCACAACCACTTCTCGGGCCCCATCCCGGCG
ACCCTTGGGAGGCTGCCGGAGAAGGTCTACATCGATCTCACCTACAACAACCTCTCCGGT
CCTATCCCGCAGAACGGGGCGCTGGAGAACCGGGGCCCCACGGCGTTCGTTGGCAACCCG
GGCCTCTGCGGGCCGCCGCTTAAGAACCCCTGCGCGCCGTCGTCCAACCCTTCCCTGTCC
AATGACGGAGGCGACTCGTCGGCACCCGAGGCAGCCGGTGGTGGCAAGGGGAAGAACAAG
GGGCTGGGGAAGATTGCCATTGTGGCCATCGTGCTCAGTGATGTTGTGGTGATTTTGATC
ATTGCACTGGTGTTCTTCTACTGCTACTGGAGGGTGGTTTCATCCAAAGACAGGAGCAAG
GGGCACGGTGCGGCTGCTGGTTCTAAAGGGTCCAGGTGTGGCAAGGATTGTGGATGTTTC
AGCAGGGATGAGTCTGAAACTCCATCTGAGCATGCGGAGCAGTACGATCTCGTGGCATTG
GACCCGCATGTGAGGTTTGATCTGGATGAGCTGCTCAAGGCATCAGCTTTTGTGCTGGGG
AAGAGTGGGATTGGAATCGTTTATAAAGTGGTTCTTGAGGACGGGCTCACAATGGCAGTT
AGGCGGCTTGGGGAGGGGGGACTGCAGAGGTTTAAGGAGTTTCAGACTGAGGTTGAGGCA
ATTGGCAAGGTCCGGCATCCCAACATTGTTACCTTGAGGGCTTATTACTGGTCTTTTGAT
GAGAAGCTGCTGATATATGATTATATTCCTAATGATAGCCTCTCTGCTGCAATTCATGGT
AAACCTGGGGTGACGACATTCACCCCGTTGCCATGGGAAGCCCGAGTAAAGATCATGAAA
GGAGTTGCCAAGGGAATGTCTTTCCTGCATGAATTCAGCCCCAAAAAGTATGTCCATGGT
GACTTGAGGCCAAACAATGTCCTCCTTGGAACAAATATGGAGCCGTTAATTTCAGATTTT
GGCCTTGGGCGACTTGCAAACATTGCTGGAGCATCACCATTTGTGCAATCAGATCGAGTT
GGTTTAGAAAAGGAACAGAGCCAGCAATCAGATGCCTCAGTGAGCCCTCTCATGAGCAAA
GGGTCATGCTATCAAGCTCCGGAGGCGCTGAAGACACTAAAGCCCTCGCAGAAATGGGAC
GTTTACTCCTATGGTGTGGTGTTACTTGAAATGATCACTGGCCGATCACCCTCTATTCTC
TTGGAAACCATGCAAATGGATCTTGTTCAATGGGTCCAATTCTGCATCGAAGACAAGAAA
CCATCTGCCGATGTGCTGGACCCTTTCCTTGCCCAAGATTCGGAACAGGAGGATGAGATG
ATCACAGTGCTGAAAGTTGCCCTCGCATGCGTTCAGGCGAATCCTGAGCGGAGGCCATCA
ATGAGGCATGTTGCGGAGACCTTGGAGCGCCTCAATGGTTCAAGCTAGCGGGGTGTTCCC
CTGATAAAAGTGTGGTTTTCGTGGAATGGGACGGTCGTGTTTAGAACTCAGTTGTGGGAC
CGAAGCTTAGGAGGAGAGAGGGCATGAACCTGCCTTAGTGTACTCCAGCGTGTAAAATTC
TCATTTCCCAAGTGGCCACCGATTGTACTGGTCTACTGGGATGTTAACGTGTTAGGTGCT
ACCGTACTAGCTAGCTAAGGTAATTAGTTTGCTGTTGAGACTTGAGAGGTGGTACTTTCA
CGTGCTTACTTAATATTGTGGGGGATATGAATTAGTTGAACATGAACCATATGTGTGCTG
GCTCTTGT