Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES02890
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:16237562:16252088:-1 gene:SORBI_3003G153000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAGGAAATGCTCCGGCGTGCTCTTCATCCTCACACTCGCCATCGTGCTCTTCCTCCTC
TCGCCGTCGCCCTCCCCGACTCCACCCCCCACCACCGCACCCAATGGCCCGATCGCCGAC
CTCCTCCCCGCGCTCCCTGGCCTTTCTGACCTCTACCCTCCCGCTCCCAACTCCACTGCC
CAGCTCTCCTGGGGCCTCCTCCGCCCGCTCCTCTGCCGCTCCGACGCGCTCCCGGGAACC
GCTGCAGGCGTCCTCGAGGCAGCCGAAGCATGGCGGAACCTCACCCTGGCTGTCGCCGCC
GCCGCGGCAAGCGAGGAGGAGGGGCGTCCCCAAGGACCTCGCTGCTCGTCGTCCGTGGGA
GGGGATCTGCGCGGAGGACGTGCCAGACTCCCCTGCGGGCTCGCGGAGGGCGCGGCAGTG
ACGGTGGTCGGGGTTCCCAGGGAGGGGGCGGCCAAGTTCTGGGTGGAGATGCTGGGTGCG
AGCGGCGAGGTTGTGCTGCACGTCAATGTGAGCCTGAGAGCCGCGGGAATGGTGGTGGAG
CAGAATTCCTGGACGCCAGAGGAGGGGTGGGGGGAATGGGAGCGGTGCCCGCTTGTTGGT
GATGTCGGCAGCAGCAATAGCAGCTTGCAGCGAAGTCCAGTGGATGGCCTTGTTCGTTGC
AATGAGAAAGTGGGTGAGAGGATCGTCCAGGAGAATAACAATACTGTGGTAAATGTTACT
GGGAACCAACCTGAAGATTGGCAGAGTTCAAAAGGACATGGTCAGTTAAGTGGCAGTTTC
TCAATTGTTGAAAGAGAGCCTTTTACAGTAATACTGTGGGCTGGTGTAGAGGGGTTCCAT
ATGACTGTAAATGGGCGGCATGAGACATCATTTGCCTATAGAGAGAGGTCGGAGCCATGG
TTGGTAGCAGAAGTCAAGGTTTCTGGTGATTTGGAGCTCTTGTCATTCTTGGCTAATGGG
TTACCAGTTTCAGAAGATATAGACATGGCTAGTGTTGCGGTTTTGAAGGCCCCACCTCTG
CCAAAGAAGCGAACTTTTCTGTTGGTTGGTGTTTTCTCTACTGGAAACAACTTCAAGCGG
CGGATGGCTTTGAGGCGAACATGGATGCAATATGAGGCTGTTCGCTCAGGCGATGTAGTA
GTCCGATTTTTCACTGGTCTTCATAAGAATGAGCATGTCAATATGGAGTTATGGAGAGAA
GCTCAATTATATGGTGATATCCAGTTGATGCCCTTTGTTGACTACTATACTTTGATCACT
TTGAAGACCATATCAATTTGCATTTTTGGGACAAAAATTGTTCCTGCAAAGTACATCATG
AAAACGGATGACGATGCTTTTGTTAGGATCGATGAAGTGATCTCGAGCCTGAAGAAGAGC
AGTTCCGATGGCCTTCTTTATGGCCTTATTTCTTTCCAGTCTTCCCCCCACAGAGATAAG
GATAGCAAATGGTTTATCAGTCGGAAGGAATGGCCTTTCGACATGTACCCGCCATGGGCT
CATGGTCCTGGATATATAATCTCACGTGACATCGCTAAGTTTGTAGTCCGAGGCCACCAG
GAACTGACTCTTCAGCTATTCAAACTTGAAGACGTGGCAATGGGGATTTGGATCCAACAG
TACAAGAACAGTGGGCAGCAAGTAAACATTGTGACTGATGACCGGTTCTACAATGAAGGA
TGCGACGCTGACTATGTCCTTGCGCACTACCAGACCCCTAGGCTTATGATGTGTCTGTGG
GAGAAGCTGAAGACGGAATATCAAGCTGTATGCTGTGAATAG

Peptide Sequence

PEP ID

EES02890
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:16237562:16252088:-1 gene:SORBI_3003G153000 transcript:EES02890 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MRKCSGVLFILTLAIVLFLLSPSPSPTPPPTTAPNGPIADLLPALPGLSDLYPPAPNSTA
QLSWGLLRPLLCRSDALPGTAAGVLEAAEAWRNLTLAVAAAAASEEEGRPQGPRCSSSVG
GDLRGGRARLPCGLAEGAAVTVVGVPREGAAKFWVEMLGASGEVVLHVNVSLRAAGMVVE
QNSWTPEEGWGEWERCPLVGDVGSSNSSLQRSPVDGLVRCNEKVGERIVQENNNTVVNVT
GNQPEDWQSSKGHGQLSGSFSIVEREPFTVILWAGVEGFHMTVNGRHETSFAYRERSEPW
LVAEVKVSGDLELLSFLANGLPVSEDIDMASVAVLKAPPLPKKRTFLLVGVFSTGNNFKR
RMALRRTWMQYEAVRSGDVVVRFFTGLHKNEHVNMELWREAQLYGDIQLMPFVDYYTLIT
LKTISICIFGTKIVPAKYIMKTDDDAFVRIDEVISSLKKSSSDGLLYGLISFQSSPHRDK
DSKWFISRKEWPFDMYPPWAHGPGYIISRDIAKFVVRGHQELTLQLFKLEDVAMGIWIQQ
YKNSGQQVNIVTDDRFYNEGCDADYVLAHYQTPRLMMCLWEKLKTEYQAVCCE

Transcript Sequence

Transcript ID

EES02890
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:16237562:16252088:-1 gene:SORBI_3003G153000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCCTTCCGCCGTTCCGCGGTCGCTGCGATGAGGAAATGCTCCGGCGTGCTCTTCATCCTC
ACACTCGCCATCGTGCTCTTCCTCCTCTCGCCGTCGCCCTCCCCGACTCCACCCCCCACC
ACCGCACCCAATGGCCCGATCGCCGACCTCCTCCCCGCGCTCCCTGGCCTTTCTGACCTC
TACCCTCCCGCTCCCAACTCCACTGCCCAGCTCTCCTGGGGCCTCCTCCGCCCGCTCCTC
TGCCGCTCCGACGCGCTCCCGGGAACCGCTGCAGGCGTCCTCGAGGCAGCCGAAGCATGG
CGGAACCTCACCCTGGCTGTCGCCGCCGCCGCGGCAAGCGAGGAGGAGGGGCGTCCCCAA
GGACCTCGCTGCTCGTCGTCCGTGGGAGGGGATCTGCGCGGAGGACGTGCCAGACTCCCC
TGCGGGCTCGCGGAGGGCGCGGCAGTGACGGTGGTCGGGGTTCCCAGGGAGGGGGCGGCC
AAGTTCTGGGTGGAGATGCTGGGTGCGAGCGGCGAGGTTGTGCTGCACGTCAATGTGAGC
CTGAGAGCCGCGGGAATGGTGGTGGAGCAGAATTCCTGGACGCCAGAGGAGGGGTGGGGG
GAATGGGAGCGGTGCCCGCTTGTTGGTGATGTCGGCAGCAGCAATAGCAGCTTGCAGCGA
AGTCCAGTGGATGGCCTTGTTCGTTGCAATGAGAAAGTGGGTGAGAGGATCGTCCAGGAG
AATAACAATACTGTGGTAAATGTTACTGGGAACCAACCTGAAGATTGGCAGAGTTCAAAA
GGACATGGTCAGTTAAGTGGCAGTTTCTCAATTGTTGAAAGAGAGCCTTTTACAGTAATA
CTGTGGGCTGGTGTAGAGGGGTTCCATATGACTGTAAATGGGCGGCATGAGACATCATTT
GCCTATAGAGAGAGGTCGGAGCCATGGTTGGTAGCAGAAGTCAAGGTTTCTGGTGATTTG
GAGCTCTTGTCATTCTTGGCTAATGGGTTACCAGTTTCAGAAGATATAGACATGGCTAGT
GTTGCGGTTTTGAAGGCCCCACCTCTGCCAAAGAAGCGAACTTTTCTGTTGGTTGGTGTT
TTCTCTACTGGAAACAACTTCAAGCGGCGGATGGCTTTGAGGCGAACATGGATGCAATAT
GAGGCTGTTCGCTCAGGCGATGTAGTAGTCCGATTTTTCACTGGTCTTCATAAGAATGAG
CATGTCAATATGGAGTTATGGAGAGAAGCTCAATTATATGGTGATATCCAGTTGATGCCC
TTTGTTGACTACTATACTTTGATCACTTTGAAGACCATATCAATTTGCATTTTTGGGACA
AAAATTGTTCCTGCAAAGTACATCATGAAAACGGATGACGATGCTTTTGTTAGGATCGAT
GAAGTGATCTCGAGCCTGAAGAAGAGCAGTTCCGATGGCCTTCTTTATGGCCTTATTTCT
TTCCAGTCTTCCCCCCACAGAGATAAGGATAGCAAATGGTTTATCAGTCGGAAGGAATGG
CCTTTCGACATGTACCCGCCATGGGCTCATGGTCCTGGATATATAATCTCACGTGACATC
GCTAAGTTTGTAGTCCGAGGCCACCAGGAACTGACTCTTCAGCTATTCAAACTTGAAGAC
GTGGCAATGGGGATTTGGATCCAACAGTACAAGAACAGTGGGCAGCAAGTAAACATTGTG
ACTGATGACCGGTTCTACAATGAAGGATGCGACGCTGACTATGTCCTTGCGCACTACCAG
ACCCCTAGGCTTATGATGTGTCTGTGGGAGAAGCTGAAGACGGAATATCAAGCTGTATGC
TGTGAATAGCATCCAAATTGCAAGTAGGAGCGAGAGGAATGGATAGGTTAGCCTACATTT
TGAACAGAACATTGGCTAAGATTTTGACGCTGGGTGGAAAATTGTTGGGAATGCACAAAA
AAGCTGTAACATTGGGTTATCACTTTTGTGTTGTGTGTCCATGTTCTTGGTTTTTTGGTG
GAAAATGTTAATCCATGTACTTGGATGGATGTTGTAAAAGAGTGTTGTAGGACATGTTTG
AGAGAGTTTCCACAATGCTGTTGATGTTGCCGTGCTGAAGACTCGGAATCAATAGCCAAC
CTGACGTGCGTAGCAAATGGCATTTTTATTTTGTACTGTTGTGTTAGTAATGTAGTAGGG
ACTTTAAGAGTCCACATAAGGGCTTGTTTGGATGTAGTTGGATTCACATCAATCCACATG
TGTTGGGGTGGGTTGGAGTGTAACTTAAACTAAATTCTACCTCAATCCACATATGTGGAT
TGAGTTAAATACG