Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES02798
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:12864715:12872525:-1 gene:SORBI_3003G135500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGTCTCCTCGCCGCCGCTCCCTCCCACTCCGCTTCCTCATCTTCATCCCTGTCCCT
CTCTTCCTTGTCCTCCTCCTCTTCCACCGCTCCTCTCATCCTCCCGCCCCGCTCCTCCAC
ACCGCCGGCTCTGGCTCCGGCCCCAGCCCCGATCCCCGCCGCTTCTCCCTCCTCATCAAG
CTCCTCGCCTACAACCGGCCGGCCGCGTTTCGCCGCTGCCTCCGCTCCCTCGCCGCCGCT
GACTATGACGGGGACCGCGTCGCGCTCCACGTCCTCCTCGACCACAGCACGACCAACTCC
TCGGTGCCCCCCCTCGCCGCGTCGCACGAGATCCTTGACTTCGTCGACGCGTTCCCGTGG
CCGCACGGCGAGAAGCGCGTGCACTACCGCGCCGCCAACGCCGGGCTCCAGGCGCAGTGG
ATCGAGGCGTGGTGGCCCGGCTCCGACGACGAATTCGCCTTCGTCGTCGAGGACGACCTC
CAGGTCTCGCCGCTCTACTACAGGTTCCTAAAGCGGGTGGTCATGAGGTACTACTACGAC
CGTGAGAACTACAGCCCCTACGTGTTCGGCGCTTCGCTGCAGCGTCCTCGGTTCGTCGCA
GGTAAACATGGAAACAAGATACAGCTGGATAGTGAGACTCGGCTTTTCTTGTATCAGATG
GTAGGCACGTGGGGTCAACTTCTCTTTCCAAAACCATGGAAAGAATTTCGATTATGGTAT
GATGACCACAAAGCCAAAGGACTCAAACCTATTCTCCAAGGCATGAAAACTACAGGATGG
TACAAGAAGATGGGTGAGAGAATATGGACTCCTTGGTTCATTAAATTTGTCCACTCACGT
GGATACTTCAATATCTACACAAACTTCCTGAAGGAAAGGGCCCTCAGCGTCTCTCATAGG
GATGCAGGTGTGAACTATGGGAAAAGTGTTGGGCCAGATTCTACTTTGTTGGATGGGAAG
AATCTTGATTTCAATTTATGGGAATTGCAACCTCTAAAGAAGCTAAAGTGGTATGATTTC
TGCTTCAATGAAGTTATTCCAGGAAGAATTGTTACAAAAAGTAGTGAACTTGGTTCTGTG
TTCAAATCTGTACAATTAAAAAGTACTGTTGTTCTTGTAACTCTGTACTCAATAGAAGAG
AGATTTGCAAGAAACTTGATTTGCCATCTTGACAAGGCAGGCATGAAGAACTATATTTTC
CTTGGTGACAATTCAGAGTTTCTGGATGACCTTGCTCATAGAGGATATCCTGTCATTGAT
GGTATGAAATTTCTTCAGAGCATCAAAGTTAGTAGTTTGCAGCGCTCTGATGATTTTGTT
AAGGAAGGATTGGTTAAATCTTATGTGATAAAAGCTTGCTTGGACCTGGGGTACAATCTA
TGGCTACTAAATGGAAATATGATTTCACTTGGCAATAAGTTGATCGAGCCATCAGATCAG
TCTGTTGACTTGTTTATTGCAGATGAAGGGTTGATGTTTATAAGGAGCTCGCTAGACTTG
AAAAACAAATGGAATGAACTTACTATGTCGAGAGTGAAAGCGATGTGTACATCTAGTGAA
TTTTCTGTTTCCATCAAACAGAAGAGTTTTGTCCATATGCTTTCTGAAGTGCTTGCGAGC
AGTGCTGGTGTTAGGCTGGGAAAACTGGATGAGGCTATCAGAGTTATTGAATTAGGGCCT
AGCACCTCAAACAGATCAATATCAGAAGACCAAAGTAATGTGCTTTTCTGGTCTCGCAGT
AAGGCTTCAGATTCAGTTCAAAAGCAACTTGAAAATATGGACTTATGGTTGGTTGACTCA
GATTCGTCTTGTAGTGCTGTTGTTTGTCACCAAAAGCAGAAGTAG

Peptide Sequence

PEP ID

EES02798
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:12864715:12872525:-1 gene:SORBI_3003G135500 transcript:EES02798 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASPRRRSLPLRFLIFIPVPLFLVLLLFHRSSHPPAPLLHTAGSGSGPSPDPRRFSLLIK
LLAYNRPAAFRRCLRSLAAADYDGDRVALHVLLDHSTTNSSVPPLAASHEILDFVDAFPW
PHGEKRVHYRAANAGLQAQWIEAWWPGSDDEFAFVVEDDLQVSPLYYRFLKRVVMRYYYD
RENYSPYVFGASLQRPRFVAGKHGNKIQLDSETRLFLYQMVGTWGQLLFPKPWKEFRLWY
DDHKAKGLKPILQGMKTTGWYKKMGERIWTPWFIKFVHSRGYFNIYTNFLKERALSVSHR
DAGVNYGKSVGPDSTLLDGKNLDFNLWELQPLKKLKWYDFCFNEVIPGRIVTKSSELGSV
FKSVQLKSTVVLVTLYSIEERFARNLICHLDKAGMKNYIFLGDNSEFLDDLAHRGYPVID
GMKFLQSIKVSSLQRSDDFVKEGLVKSYVIKACLDLGYNLWLLNGNMISLGNKLIEPSDQ
SVDLFIADEGLMFIRSSLDLKNKWNELTMSRVKAMCTSSEFSVSIKQKSFVHMLSEVLAS
SAGVRLGKLDEAIRVIELGPSTSNRSISEDQSNVLFWSRSKASDSVQKQLENMDLWLVDS
DSSCSAVVCHQKQK

Transcript Sequence

Transcript ID

EES02798
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:12864715:12872525:-1 gene:SORBI_3003G135500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCAAGCCCACTGCCCGCTCAAGAAAGTTTATGGGCCTCAACAGTCATTGCTCTCCTGTCT
TCCTCTCCAACTCCGTCGATCCGCCGCCCCCTTCAGTCCCGTCCCGTCGCACTTCCTCGA
TCTCCTCCACTCCACTTCAGCCCACCCCCCCACAATGGCGTCTCCTCGCCGCCGCTCCCT
CCCACTCCGCTTCCTCATCTTCATCCCTGTCCCTCTCTTCCTTGTCCTCCTCCTCTTCCA
CCGCTCCTCTCATCCTCCCGCCCCGCTCCTCCACACCGCCGGCTCTGGCTCCGGCCCCAG
CCCCGATCCCCGCCGCTTCTCCCTCCTCATCAAGCTCCTCGCCTACAACCGGCCGGCCGC
GTTTCGCCGCTGCCTCCGCTCCCTCGCCGCCGCTGACTATGACGGGGACCGCGTCGCGCT
CCACGTCCTCCTCGACCACAGCACGACCAACTCCTCGGTGCCCCCCCTCGCCGCGTCGCA
CGAGATCCTTGACTTCGTCGACGCGTTCCCGTGGCCGCACGGCGAGAAGCGCGTGCACTA
CCGCGCCGCCAACGCCGGGCTCCAGGCGCAGTGGATCGAGGCGTGGTGGCCCGGCTCCGA
CGACGAATTCGCCTTCGTCGTCGAGGACGACCTCCAGGTCTCGCCGCTCTACTACAGGTT
CCTAAAGCGGGTGGTCATGAGGTACTACTACGACCGTGAGAACTACAGCCCCTACGTGTT
CGGCGCTTCGCTGCAGCGTCCTCGGTTCGTCGCAGGTAAACATGGAAACAAGATACAGCT
GGATAGTGAGACTCGGCTTTTCTTGTATCAGATGGTAGGCACGTGGGGTCAACTTCTCTT
TCCAAAACCATGGAAAGAATTTCGATTATGGTATGATGACCACAAAGCCAAAGGACTCAA
ACCTATTCTCCAAGGCATGAAAACTACAGGATGGTACAAGAAGATGGGTGAGAGAATATG
GACTCCTTGGTTCATTAAATTTGTCCACTCACGTGGATACTTCAATATCTACACAAACTT
CCTGAAGGAAAGGGCCCTCAGCGTCTCTCATAGGGATGCAGGTGTGAACTATGGGAAAAG
TGTTGGGCCAGATTCTACTTTGTTGGATGGGAAGAATCTTGATTTCAATTTATGGGAATT
GCAACCTCTAAAGAAGCTAAAGTGGTATGATTTCTGCTTCAATGAAGTTATTCCAGGAAG
AATTGTTACAAAAAGTAGTGAACTTGGTTCTGTGTTCAAATCTGTACAATTAAAAAGTAC
TGTTGTTCTTGTAACTCTGTACTCAATAGAAGAGAGATTTGCAAGAAACTTGATTTGCCA
TCTTGACAAGGCAGGCATGAAGAACTATATTTTCCTTGGTGACAATTCAGAGTTTCTGGA
TGACCTTGCTCATAGAGGATATCCTGTCATTGATGGTATGAAATTTCTTCAGAGCATCAA
AGTTAGTAGTTTGCAGCGCTCTGATGATTTTGTTAAGGAAGGATTGGTTAAATCTTATGT
GATAAAAGCTTGCTTGGACCTGGGGTACAATCTATGGCTACTAAATGGAAATATGATTTC
ACTTGGCAATAAGTTGATCGAGCCATCAGATCAGTCTGTTGACTTGTTTATTGCAGATGA
AGGGTTGATGTTTATAAGGAGCTCGCTAGACTTGAAAAACAAATGGAATGAACTTACTAT
GTCGAGAGTGAAAGCGATGTGTACATCTAGTGAATTTTCTGTTTCCATCAAACAGAAGAG
TTTTGTCCATATGCTTTCTGAAGTGCTTGCGAGCAGTGCTGGTGTTAGGCTGGGAAAACT
GGATGAGGCTATCAGAGTTATTGAATTAGGGCCTAGCACCTCAAACAGATCAATATCAGA
AGACCAAAGTAATGTGCTTTTCTGGTCTCGCAGTAAGGCTTCAGATTCAGTTCAAAAGCA
ACTTGAAAATATGGACTTATGGTTGGTTGACTCAGATTCGTCTTGTAGTGCTGTTGTTTG
TCACCAAAAGCAGAAGTAGCCAGGTTGTTTTGGCACATTACTTTTGCTTCCCTGAGAAAA
ACATTTGTGCCATGATAGGAATCCAGGGTAACCGACTAAGTGGCACTTATATACTTTCCA
AAATCATATGATGACATATCTTTGGATGCATGAGGGGGATCAGCCATTGTTTGATCTTTG
TAGATTATGCGATGAGGCTGTTCGATCAAATGTCTGTTTGTGAATACAGTTGGCTATGCC
ACCGCAGATAACCATTTTGGAGTTCTGCTTCTGCATGAATTTTATGCTGAACACAGATAT
AGTTCTGAGGTTCTGAATACTTGGATCCTTTTTTGGATTGGTGAGGGCTAACAAAGTCTT
CAGTTAGCTAACCTGTTAATTCAACTCACAGGAGCAGTTTTGAACATTCTATCCTGCTGC
ATACCATGTTGATAGCAATGTCCCAACAACAATCCCTGCAGACATTCAAACTGGTATGGT
TCCTTTTTGTTCAATGTACAAAGTACTCATTGGTCTGTACTCTAGTTCTGTAGCAATGCA
AATGTTGTTGTCTGTATTAAAAGCTGTTTAATCATGGACATCTGGCACGAGAGAATCTGC
CACATATTCATAGCTAACTAGCATGTGTGGTGTTTGTTTTCGTCTGTGACTTGAGAGTTT
TCCTACATTACTTTTTTTTCTTCCCCAAAATGTGAGTTTTAACATCATGCTCTTTGTTTT
GGTTGCAACCGGATCGCAGCAGCACCCATGGGACAGATGTAGAAAGTGTGCATCTGAAGA
AAATCCGGCAGATGCGGTTGGTGCGGTGCACATTTTCACTGGCAGAAGCAACGTCTGCTG
GATAAAGAGAGAAAGGGAAACCGAGCTGGAAAGTGGTTCGACAATTTTGACAGATCGATC
ATAGAACCCATAGACAATTCTGCAGCAGCGACTAGCAAGTGTGGTGTTGGTGTGTGCCGA
AGAGATCTCCCAACCAGAGTTGACGCTCATGTTTCCTTAGCAGCACGATTTCCTCCCACC
TGACCTGAACAAGGTGTGTGGCATCATCTGTTCGCTGTGTATCCAACTTGGAACACAAGC
AAGGATGTACTAGCTGCGCTGCGACAGAACGGTCCGCCGGGAAAATGACATGCGGGTTGT
ACCGGATGCGCCGTTGGCATCGCATATGACGACGTGACAATAATATGCATCGTTTCAGGT
TGGGATGCGAGTGTTGTGAGCGTGATATCTGCTCTGCAGGGCTGCAAGTTGCTGAGATAG
GTTTCCTCATGGCTGGGGCCTGGAGTTGCAGACTTGCAGTTTAATCATGTTGTTAAGTGG
CCAATCCTTGAATAAGATCATGTTAGGTATAGCAACTAGCAAGTCTCAAAGTCTCGCCAG
ACGCGATTAGCAAGTAGGCTCTACTGCGCTGGGGGGACATGTGCTTCGTCCACCCAACGC
ATTCGGATTCCAGGTCTCCATTGGAGCGTTGCTGCTGAGATAGGTTTCCCGTTTTCTCAG
GGACTGTTTAACAGAATGCCAGGACCATTAATTAAAA