Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES02731
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:11065634:11069607:-1 gene:SORBI_3003G121400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCGGATCAGAAGGATCCTGGGATCAAGCTCTTCGGCCGGGTGATCCCGTTGGAGCCG
GAACCCGCGCCGGGAACCACGGAAGCGGAGGACCCGCCGCCCAGCCACGACCAGCCGCCG
GACGAGCTGCAGCCACGGGCGCCGGAGTTAGCGGCGGCGGCGGATGAGGATCAACACAAT
GAGAAAGAAGAGAAACCTGCTAGTGAAATGGTTAACATGCCACAAGAGAAGGATAAAGAA
ATCAAGGTTGACACGCCACAAGTGGAGAAGGATAATGAAATGAAGGTCGATGCGCCACAA
AAGGAACATGATGATGAAATGAAAATTGATGCACAGCAAGAGAAAAAAGATGAACAGATG
GAAGTCAATGGATCACCAATGCATGAAAATATAGAACCAGCCAATTTACCTCCCTCAGAG
CATAAGAAAGAAGACGAGGACCTGATGAACAGTACTGAAGATAAAGCAGCATCAGATCCA
AAGGGGGAGAATGAGAAGACATCAAATGAGGAATCAGGCCAGGACAAGGCACTTAAGAAG
CCAGATAAGATTCTACCTTGTCCTCGGTGCAACAGCATGGATACAAAGTTCTGCTATTAC
AACAATTACAATGTTAATCAACCAAGACACTTCTGTAAGAATTGCCAGCGGTACTGGACT
GCAGGGGGCACTATGAGGAATGTACCTGTTGGTGCTGGGCGGCGCAAAAGTAAGAATTCA
TCATTGCACTACCGTCAGTTACTGATGGCCCCTGATTGTATGCTGGGGTCTAGAGTGGAC
ATATCAAAGTCAGTGCTCCCTGAAGCTCTTGTATCTCCACCTGCCCCGATACAGCCAACC
AGTAGAAATGAAACAGTTCTAAAATTTGGGCCTGAGGTGCCACTTTGTGAATCAATGGTG
TCAGCATTGAACATTGATGAGCAGAATGTAAACAACTCTGGATCAGCACCAAGAGGTGAA
AATAGGGAAGATAACCCTGGACCTGGCACATCATACAATGGTGTGCCTGAAAACATGGTT
CACGTCGATAAGAACGGAGCACCAGTTCATTGTAACGGAGTTGCCCCAGTGCCACAATAT
TACCTTGGTACCCCTTTCATGTACCCTTGGAATGTAGGATGGAACAATGTCCCTGTGATG
GCGCCAGGTAAAAGTATGCCCGAATCTGCTCCTGCTTCTGCTTCAGAGAGCTGCAGTACT
AGTTCAGCTCTATGGATGAACTCTCCCATGATTCCAGCCTCAAGATTTCCTAGTCCAGCA
TTTCCATACCCACTTGTGCCACCTGCGCTTTGGGGTTGTTTGTCTGGATGGCCAGTGACA
ACTTGGAACATACCATGGATCAGAGCTAATGGTTGCGTGTCACCGTCGTCATCAAGCAAC
AGCAGCTGCTCGGGCAATGGGTCTCCTACTCTGGGTAAACATTCCAGGGACTCTAATCCA
ATGAAAGAGGAGAAGAGAGAGAAATCACTGTGGGTTCCCAAGACACTCCGGATCGATGAT
CCTGATGAAGCTGCAAAGAGCTCAATATGGGCCACCCTTGGCATCAAACCCGGAGACCCT
GGCACTTTCAAGCCTTTCCAGTCCAAGGTCGAGAGCAAGGGACAGAGATCAGACGCTGCT
CAGGTTTTGCAGGCGAATCCAGCAGCATTATCACGCTCGCAAACGTTCCAGGAGAGCTCT
TGA

Peptide Sequence

PEP ID

EES02731
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:11065634:11069607:-1 gene:SORBI_3003G121400 transcript:EES02731 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSDQKDPGIKLFGRVIPLEPEPAPGTTEAEDPPPSHDQPPDELQPRAPELAAAADEDQHN
EKEEKPASEMVNMPQEKDKEIKVDTPQVEKDNEMKVDAPQKEHDDEMKIDAQQEKKDEQM
EVNGSPMHENIEPANLPPSEHKKEDEDLMNSTEDKAASDPKGENEKTSNEESGQDKALKK
PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKSKNS
SLHYRQLLMAPDCMLGSRVDISKSVLPEALVSPPAPIQPTSRNETVLKFGPEVPLCESMV
SALNIDEQNVNNSGSAPRGENREDNPGPGTSYNGVPENMVHVDKNGAPVHCNGVAPVPQY
YLGTPFMYPWNVGWNNVPVMAPGKSMPESAPASASESCSTSSALWMNSPMIPASRFPSPA
FPYPLVPPALWGCLSGWPVTTWNIPWIRANGCVSPSSSSNSSCSGNGSPTLGKHSRDSNP
MKEEKREKSLWVPKTLRIDDPDEAAKSSIWATLGIKPGDPGTFKPFQSKVESKGQRSDAA
QVLQANPAALSRSQTFQESS

Transcript Sequence

Transcript ID

EES02731
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:11065634:11069607:-1 gene:SORBI_3003G121400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AATTCCACAACACCCCGTTCCCATGTAGAGTAAGAGCTACTATATCCATTTTTTAGAGCC
TCTCTCTCTCTCTCTCTCTCCAGCTTGGTTCCTCTTTCTCTCTCTCTCGCCGCTTCGAGA
GCGCGTAAGCAGCAGCAGCAGCGGCTTGCGTTCCTGTCGGTCTCGCGGGAAGGAGCAGGA
CGAGGATGTCGGATCAGAAGGATCCTGGGATCAAGCTCTTCGGCCGGGTGATCCCGTTGG
AGCCGGAACCCGCGCCGGGAACCACGGAAGCGGAGGACCCGCCGCCCAGCCACGACCAGC
CGCCGGACGAGCTGCAGCCACGGGCGCCGGAGTTAGCGGCGGCGGCGGATGAGGATCAAC
ACAATGAGAAAGAAGAGAAACCTGCTAGTGAAATGGTTAACATGCCACAAGAGAAGGATA
AAGAAATCAAGGTTGACACGCCACAAGTGGAGAAGGATAATGAAATGAAGGTCGATGCGC
CACAAAAGGAACATGATGATGAAATGAAAATTGATGCACAGCAAGAGAAAAAAGATGAAC
AGATGGAAGTCAATGGATCACCAATGCATGAAAATATAGAACCAGCCAATTTACCTCCCT
CAGAGCATAAGAAAGAAGACGAGGACCTGATGAACAGTACTGAAGATAAAGCAGCATCAG
ATCCAAAGGGGGAGAATGAGAAGACATCAAATGAGGAATCAGGCCAGGACAAGGCACTTA
AGAAGCCAGATAAGATTCTACCTTGTCCTCGGTGCAACAGCATGGATACAAAGTTCTGCT
ATTACAACAATTACAATGTTAATCAACCAAGACACTTCTGTAAGAATTGCCAGCGGTACT
GGACTGCAGGGGGCACTATGAGGAATGTACCTGTTGGTGCTGGGCGGCGCAAAAGTAAGA
ATTCATCATTGCACTACCGTCAGTTACTGATGGCCCCTGATTGTATGCTGGGGTCTAGAG
TGGACATATCAAAGTCAGTGCTCCCTGAAGCTCTTGTATCTCCACCTGCCCCGATACAGC
CAACCAGTAGAAATGAAACAGTTCTAAAATTTGGGCCTGAGGTGCCACTTTGTGAATCAA
TGGTGTCAGCATTGAACATTGATGAGCAGAATGTAAACAACTCTGGATCAGCACCAAGAG
GTGAAAATAGGGAAGATAACCCTGGACCTGGCACATCATACAATGGTGTGCCTGAAAACA
TGGTTCACGTCGATAAGAACGGAGCACCAGTTCATTGTAACGGAGTTGCCCCAGTGCCAC
AATATTACCTTGGTACCCCTTTCATGTACCCTTGGAATGTAGGATGGAACAATGTCCCTG
TGATGGCGCCAGGTAAAAGTATGCCCGAATCTGCTCCTGCTTCTGCTTCAGAGAGCTGCA
GTACTAGTTCAGCTCTATGGATGAACTCTCCCATGATTCCAGCCTCAAGATTTCCTAGTC
CAGCATTTCCATACCCACTTGTGCCACCTGCGCTTTGGGGTTGTTTGTCTGGATGGCCAG
TGACAACTTGGAACATACCATGGATCAGAGCTAATGGTTGCGTGTCACCGTCGTCATCAA
GCAACAGCAGCTGCTCGGGCAATGGGTCTCCTACTCTGGGTAAACATTCCAGGGACTCTA
ATCCAATGAAAGAGGAGAAGAGAGAGAAATCACTGTGGGTTCCCAAGACACTCCGGATCG
ATGATCCTGATGAAGCTGCAAAGAGCTCAATATGGGCCACCCTTGGCATCAAACCCGGAG
ACCCTGGCACTTTCAAGCCTTTCCAGTCCAAGGTCGAGAGCAAGGGACAGAGATCAGACG
CTGCTCAGGTTTTGCAGGCGAATCCAGCAGCATTATCACGCTCGCAAACGTTCCAGGAGA
GCTCTTGACTTCATACCTTCAGTCTATCTTATAGTTTTGGTACTGTAATGCTTACATGCT
AGTAGAGTTTTGCGGTATGTGAAAAGATCAGCAGAGAGCTTCTTGTATAGCCACCTAGTG
GCTCTTGCAAAGAGCTTCCATGAGAACTCCTTACGAGATATGTATGTATTGTAAATACTT
GACATACTGGTGTTGTATATTCAGTATTAAGCAGATTCAGGAATAGACTCGCCTCTCACC
TGGTTTGGCTCTGGTTTATGCTGTAAACAGTTAACATGTAGTAGATAATGTTGCAGTGAA
TGAACTAAATATACTATCAAATGAATCGTTTTGAC