Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES02571
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:7826326:7832039:-1 gene:SORBI_3003G089600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTCAAGTGCTGCAGGAAGTGCACCAGTATGGCCTCCATGAACAGCTGCACGAATCA
CCTCCACAAGCAGCACTGATCTACTCTCTTCTGCTAGCCGCTTGCCCTGTAATAATTCTC
CTCCTACTCATACGCCGCTACGCGACGACGTCGCCGTCGGCAGGGGCCACGGCGGCGAGA
GCAAGGCAAGAAGAGCTGCTGGGGAAGCTCCCTGCGCCTCCGCGCAAGCTCCCCGTCGTC
GGTCACCTACACCTCGTAGGGCCCCTCCCGCACGTCTCCCTCCGCGACCTCGCCGCCGAG
CACGGCCGCGACGGCCTCATGCTCCTCCGCCTCGGCGCCGTCCCCACGCTCGTCGTCTCC
TCCCCGCGCGCCGCGCAGGCCGTCCTGCGCACGCACGACCAGGTGTTCGCGTCCCGGGCC
TACTCCCCCGTGGCTGACATCCTCTTCTACGGCTCCACCGACGTCGCCTTCGCCCCCTAC
GGCGACCACTGGCGCCAAGTCAAGAAGATCTCCACGACGCACCTCCTCACCAACAAGAAG
GTCCGGGCCTACCGTCACGCTCGTGAGCGAGAGGTGAGGTTGGTCATAGCCAAGATTCGG
AAGGCAGCAATCTCAGGCACGACCGTTGAATTGAGCGACCTGCTCAGCTCCTTCGCCAAC
GACATAGTGTGTCATGCTGTGTCAGACGAGTATTTTAGGGAGAAAGGCCGTAACAAGCTC
TTTCGAGAACTGGCTGAGGCGAACTCGTCCCTCATAGGTGGCTTCAACCTTGAGGACTAC
TTCCCTGTCTTGGTGAAGCTGGATATGGTCAAGAGGATGGTGTGTGCTAAGGCTCAGAAG
GTGCACAAGAGATGGGACGAGCTTCTTGATAAGCTCATTGATGGCCATGCAAATGCAACA
AGGTCAGAGTCACAACATGTCGACGAGGAAAGTGACTTCATTGATCTGTTGCTCTCTATC
CAGCAAGAGTACAACCTCACGAGGGACCATATCAAGGCACAACTGGTGATCATGTTCCAA
GCTGGCACTGATACATCATTCATAGTGTTGGAATATGCTATGATTAAGCTCATGCAAAAC
CCCAACCTCATGACCAAGCTACAAGACGAGCTGAGGACTATACCAAAGGAAAAGGAAATT
GTTACTGAAGACGATTTGAATGGTCTGTCCTACCTAAAGGCAGTCATCAAAGAGACACTA
CGACTCCATGGACCAGCTCCTCTCCTTGTGCCCCACCTCTCCATGGCTGAATGTGACATA
GAGGGTTACACGATACCGTCTAGAACATGTGTCATCGTGAATGCTTGGGCTCTTGCTAGG
GATCCTATCTATTGGGAGAGTGCTGAGAGGTTCATGCCTGAGCGGTTCTTGGAAGGTGGC
AGCGCCATGACCATGGACTATAGAGGAAACGATTTCCACTACTTGCCATTTGGGGTTGGG
CGAAGGATTTGCCCAGGAATAAGCTTTGCCATTTCTTCTATAGAGATCATGCTAGCAAAC
CTTGTGTACCACTTCAACTGGGAGCTACCACCAGAATTGAAGAAAAGTGGCATTGATATG
ACTGAATCATTTGGAGTGACAGTGCACCGAACAAAGAAGCTTCTCCTTGTACCTGTATTG
CCTCAGGACTAA

Peptide Sequence

PEP ID

EES02571
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:7826326:7832039:-1 gene:SORBI_3003G089600 transcript:EES02571 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAQVLQEVHQYGLHEQLHESPPQAALIYSLLLAACPVIILLLLIRRYATTSPSAGATAAR
ARQEELLGKLPAPPRKLPVVGHLHLVGPLPHVSLRDLAAEHGRDGLMLLRLGAVPTLVVS
SPRAAQAVLRTHDQVFASRAYSPVADILFYGSTDVAFAPYGDHWRQVKKISTTHLLTNKK
VRAYRHAREREVRLVIAKIRKAAISGTTVELSDLLSSFANDIVCHAVSDEYFREKGRNKL
FRELAEANSSLIGGFNLEDYFPVLVKLDMVKRMVCAKAQKVHKRWDELLDKLIDGHANAT
RSESQHVDEESDFIDLLLSIQQEYNLTRDHIKAQLVIMFQAGTDTSFIVLEYAMIKLMQN
PNLMTKLQDELRTIPKEKEIVTEDDLNGLSYLKAVIKETLRLHGPAPLLVPHLSMAECDI
EGYTIPSRTCVIVNAWALARDPIYWESAERFMPERFLEGGSAMTMDYRGNDFHYLPFGVG
RRICPGISFAISSIEIMLANLVYHFNWELPPELKKSGIDMTESFGVTVHRTKKLLLVPVL
PQD

Transcript Sequence

Transcript ID

EES02571
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:7826326:7832039:-1 gene:SORBI_3003G089600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CACCACTGCTCAGTAAACTGCCAAACACAGACAGCAAGCTAGATAGATAGCTATTCCGTT
CCAGCCAGAGCCATGGCTCAAGTGCTGCAGGAAGTGCACCAGTATGGCCTCCATGAACAG
CTGCACGAATCACCTCCACAAGCAGCACTGATCTACTCTCTTCTGCTAGCCGCTTGCCCT
GTAATAATTCTCCTCCTACTCATACGCCGCTACGCGACGACGTCGCCGTCGGCAGGGGCC
ACGGCGGCGAGAGCAAGGCAAGAAGAGCTGCTGGGGAAGCTCCCTGCGCCTCCGCGCAAG
CTCCCCGTCGTCGGTCACCTACACCTCGTAGGGCCCCTCCCGCACGTCTCCCTCCGCGAC
CTCGCCGCCGAGCACGGCCGCGACGGCCTCATGCTCCTCCGCCTCGGCGCCGTCCCCACG
CTCGTCGTCTCCTCCCCGCGCGCCGCGCAGGCCGTCCTGCGCACGCACGACCAGGTGTTC
GCGTCCCGGGCCTACTCCCCCGTGGCTGACATCCTCTTCTACGGCTCCACCGACGTCGCC
TTCGCCCCCTACGGCGACCACTGGCGCCAAGTCAAGAAGATCTCCACGACGCACCTCCTC
ACCAACAAGAAGGTCCGGGCCTACCGTCACGCTCGTGAGCGAGAGGTGAGGTTGGTCATA
GCCAAGATTCGGAAGGCAGCAATCTCAGGCACGACCGTTGAATTGAGCGACCTGCTCAGC
TCCTTCGCCAACGACATAGTGTGTCATGCTGTGTCAGACGAGTATTTTAGGGAGAAAGGC
CGTAACAAGCTCTTTCGAGAACTGGCTGAGGCGAACTCGTCCCTCATAGGTGGCTTCAAC
CTTGAGGACTACTTCCCTGTCTTGGTGAAGCTGGATATGGTCAAGAGGATGGTGTGTGCT
AAGGCTCAGAAGGTGCACAAGAGATGGGACGAGCTTCTTGATAAGCTCATTGATGGCCAT
GCAAATGCAACAAGGTCAGAGTCACAACATGTCGACGAGGAAAGTGACTTCATTGATCTG
TTGCTCTCTATCCAGCAAGAGTACAACCTCACGAGGGACCATATCAAGGCACAACTGGTG
ATCATGTTCCAAGCTGGCACTGATACATCATTCATAGTGTTGGAATATGCTATGATTAAG
CTCATGCAAAACCCCAACCTCATGACCAAGCTACAAGACGAGCTGAGGACTATACCAAAG
GAAAAGGAAATTGTTACTGAAGACGATTTGAATGGTCTGTCCTACCTAAAGGCAGTCATC
AAAGAGACACTACGACTCCATGGACCAGCTCCTCTCCTTGTGCCCCACCTCTCCATGGCT
GAATGTGACATAGAGGGTTACACGATACCGTCTAGAACATGTGTCATCGTGAATGCTTGG
GCTCTTGCTAGGGATCCTATCTATTGGGAGAGTGCTGAGAGGTTCATGCCTGAGCGGTTC
TTGGAAGGTGGCAGCGCCATGACCATGGACTATAGAGGAAACGATTTCCACTACTTGCCA
TTTGGGGTTGGGCGAAGGATTTGCCCAGGAATAAGCTTTGCCATTTCTTCTATAGAGATC
ATGCTAGCAAACCTTGTGTACCACTTCAACTGGGAGCTACCACCAGAATTGAAGAAAAGT
GGCATTGATATGACTGAATCATTTGGAGTGACAGTGCACCGAACAAAGAAGCTTCTCCTT
GTACCTGTATTGCCTCAGGACTAATTATTATTTGGTATTCTTGTGTGCCTAGCAGATAGC
GCATAATGCCTATCATGACAGTTGTAGCTCATATGTGAGTATTGGGCTTGTTATTCAGAA
GGGTTTGCTGAACAAATAAACCATCATTTGTTCATGAAAGTTCATTGTCACTTCCTCAAA
C