Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES02514
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:6746499:6748544:-1 gene:SORBI_3003G078400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAGCCGCCTACCTTTCTCCCGCTCGCCGCCGCCGTCGTCGCCGTCCTCCTACTCGCC
GTCGCCCCGACACCCGCCGTCTCCCGCCACCACCGCTCGTCCGCCGACACGGAGACGCTC
GATGTAGCCGCCTCACTCTCCCTCGCCCGCGCCGCGCTCTCCACCGACGCCGCCGTCTCG
CTGCACCAGTCCGCCGCCGCCGCCGAGGCGAAGCGCTCTTCACGGGAGAGCGGCGGAGGA
GGTAGTCTCACGCTGCGGCTCCACTCCCGGGACTTCCTGCCGGAGGCGCAGCAGCGGCAC
GCGACGTACCGGTCCCTGGTGCAATCCCGCCTCCGCCGCGACTCGGCGCGCGCCGCGGCG
CTGTCGGCCCGCGCGACGCTGGCGGCGGACGGGGTGACCCGTCAGGACCTTCGCCCCGCG
AACGAGTCGGCGGTCTTCGGGGCGTCCTTGGCGGCGGCGATCCAGGGCCCCGTGGTGTCG
GGCGTCGGGCAGGGCAGCGGGGAGTACTTCTCCCGCGTGGGCATCGGCAGCCCCGCGCGG
GAGCTGTACATGGTGCTGGACACCGGCAGCGACGTCACCTGGGTGCAGTGCCAGCCCTGC
GCCGACTGCTACCAGCAGTCGGACCCGGTGTTCGACCCGTCGCTCTCCGCCTCCTACGCC
GCCGTCTCCTGCGACTCCCCGCGGTGCCGTGACCTCGACACCGCGGCGTGCCGCAACGCC
ACGGGCGCGTGCCTCTACGAGGTGGCCTACGGCGACGGATCCTACACCGTGGGCGACTTC
GCCACCGAGACGCTGACGCTCGGGGACTCCACCCCCGTCACCAACGTCGCCATCGGGTGC
GGCCACGACAACGAAGGTCTCTTCGTCGGCGCCGCGGGGCTGCTAGCGCTGGGAGGCGGC
CCGCTCTCGTTCCCGTCCCAGATCTCCGCGTCCACCTTCTCCTACTGCCTCGTCGACCGC
GACTCCCCCGCCGCGTCCACGCTCCAGTTCGGCGCCGACGGCGCCGAGGCGGACACCGTG
ACGGCGCCACTCGTGCGCAGCCCGCGGACGGGCACCTTCTACTACGTGGCGCTGTCGGGG
ATCTCGGTCGGCGGGCAGGCGCTGTCCATCCCGTCGTCGGCCTTCGCCATGGACGCCACG
TCGGGATCGGGAGGCGTCATCGTGGACTCCGGCACCGCGGTCACGCGTCTCCAGTCCTCG
GCCTACGCGGCGCTCCGCGACGCCTTCGTCCGCGGCACGCCGTCGCTGCCGCGGACCTCC
GGGGTGTCGCTGTTCGACACGTGCTACGACCTGTCGGACCGGACCAGCGTGGAGGTGCCC
GCGGTGTCGCTCCGGTTCGAGGGCGGCGGCGCGCTGCGGCTTCCCGCGAAGAACTACCTC
ATCCCCGTGGACGGTGCCGGGACCTACTGCCTGGCGTTCGCGCCGACGAACGCCGCCGTG
TCCATCATCGGGAACGTGCAGCAGCAGGGCACCCGCGTCAGCTTCGACACCGCCAAGGGC
GTCGTCGGCTTCACCCCGAACAAGTGCTAG

Peptide Sequence

PEP ID

EES02514
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:6746499:6748544:-1 gene:SORBI_3003G078400 transcript:EES02514 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MQPPTFLPLAAAVVAVLLLAVAPTPAVSRHHRSSADTETLDVAASLSLARAALSTDAAVS
LHQSAAAAEAKRSSRESGGGGSLTLRLHSRDFLPEAQQRHATYRSLVQSRLRRDSARAAA
LSARATLAADGVTRQDLRPANESAVFGASLAAAIQGPVVSGVGQGSGEYFSRVGIGSPAR
ELYMVLDTGSDVTWVQCQPCADCYQQSDPVFDPSLSASYAAVSCDSPRCRDLDTAACRNA
TGACLYEVAYGDGSYTVGDFATETLTLGDSTPVTNVAIGCGHDNEGLFVGAAGLLALGGG
PLSFPSQISASTFSYCLVDRDSPAASTLQFGADGAEADTVTAPLVRSPRTGTFYYVALSG
ISVGGQALSIPSSAFAMDATSGSGGVIVDSGTAVTRLQSSAYAALRDAFVRGTPSLPRTS
GVSLFDTCYDLSDRTSVEVPAVSLRFEGGGALRLPAKNYLIPVDGAGTYCLAFAPTNAAV
SIIGNVQQQGTRVSFDTAKGVVGFTPNKC

Transcript Sequence

Transcript ID

EES02514
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:6746499:6748544:-1 gene:SORBI_3003G078400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATCATTCTCATTCCTGCCCTGCCCCCCGACACTCTGCTCTACTCCCCCACTCCACTCCCC
CCCAGCCCTCTCACCGCCAGCACAATGCAGCCGCCTACCTTTCTCCCGCTCGCCGCCGCC
GTCGTCGCCGTCCTCCTACTCGCCGTCGCCCCGACACCCGCCGTCTCCCGCCACCACCGC
TCGTCCGCCGACACGGAGACGCTCGATGTAGCCGCCTCACTCTCCCTCGCCCGCGCCGCG
CTCTCCACCGACGCCGCCGTCTCGCTGCACCAGTCCGCCGCCGCCGCCGAGGCGAAGCGC
TCTTCACGGGAGAGCGGCGGAGGAGGTAGTCTCACGCTGCGGCTCCACTCCCGGGACTTC
CTGCCGGAGGCGCAGCAGCGGCACGCGACGTACCGGTCCCTGGTGCAATCCCGCCTCCGC
CGCGACTCGGCGCGCGCCGCGGCGCTGTCGGCCCGCGCGACGCTGGCGGCGGACGGGGTG
ACCCGTCAGGACCTTCGCCCCGCGAACGAGTCGGCGGTCTTCGGGGCGTCCTTGGCGGCG
GCGATCCAGGGCCCCGTGGTGTCGGGCGTCGGGCAGGGCAGCGGGGAGTACTTCTCCCGC
GTGGGCATCGGCAGCCCCGCGCGGGAGCTGTACATGGTGCTGGACACCGGCAGCGACGTC
ACCTGGGTGCAGTGCCAGCCCTGCGCCGACTGCTACCAGCAGTCGGACCCGGTGTTCGAC
CCGTCGCTCTCCGCCTCCTACGCCGCCGTCTCCTGCGACTCCCCGCGGTGCCGTGACCTC
GACACCGCGGCGTGCCGCAACGCCACGGGCGCGTGCCTCTACGAGGTGGCCTACGGCGAC
GGATCCTACACCGTGGGCGACTTCGCCACCGAGACGCTGACGCTCGGGGACTCCACCCCC
GTCACCAACGTCGCCATCGGGTGCGGCCACGACAACGAAGGTCTCTTCGTCGGCGCCGCG
GGGCTGCTAGCGCTGGGAGGCGGCCCGCTCTCGTTCCCGTCCCAGATCTCCGCGTCCACC
TTCTCCTACTGCCTCGTCGACCGCGACTCCCCCGCCGCGTCCACGCTCCAGTTCGGCGCC
GACGGCGCCGAGGCGGACACCGTGACGGCGCCACTCGTGCGCAGCCCGCGGACGGGCACC
TTCTACTACGTGGCGCTGTCGGGGATCTCGGTCGGCGGGCAGGCGCTGTCCATCCCGTCG
TCGGCCTTCGCCATGGACGCCACGTCGGGATCGGGAGGCGTCATCGTGGACTCCGGCACC
GCGGTCACGCGTCTCCAGTCCTCGGCCTACGCGGCGCTCCGCGACGCCTTCGTCCGCGGC
ACGCCGTCGCTGCCGCGGACCTCCGGGGTGTCGCTGTTCGACACGTGCTACGACCTGTCG
GACCGGACCAGCGTGGAGGTGCCCGCGGTGTCGCTCCGGTTCGAGGGCGGCGGCGCGCTG
CGGCTTCCCGCGAAGAACTACCTCATCCCCGTGGACGGTGCCGGGACCTACTGCCTGGCG
TTCGCGCCGACGAACGCCGCCGTGTCCATCATCGGGAACGTGCAGCAGCAGGGCACCCGC
GTCAGCTTCGACACCGCCAAGGGCGTCGTCGGCTTCACCCCGAACAAGTGCTAGCCTTGC
CTGCGTTCTGCGTTGTGTGTGCTTCTGGCTGGCTAACCGCCTTGTTAGCCACGGTGGTAG
TACTGTAATGACTAGCGGGTGTTTAATTAGCGGGAGAGTGATTAGAGTGGGGGTAAGTAA
TTAAGCGGTGGGCCCTGCCGTGTCTGGTCTGGGGAGGAGCGAAAGGCAAAGGCGGCTGCC
AGCCTGTTTGGCGCGGCGCGGGTGGGTCCAGTTGTGTCTCTCTTTCCCTCGCGGTCTCGG
TCTTTGAGTATGGATGGGTGTGCGTGGGTGGAGCCGTGTCATGACGAAATTATGTCATGG
GGCTCCAAGTTTAGAGTATTTATTTTAACTTTATAATTATGTCAAGAAAAAATGGAAGTT
TCCATCCCGCGGAAACGATCAGATATGCTTGAATGTTAGTACTAATTTGAATTTGATGGT
ACAGCA