Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES02488
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:6193285:6198021:-1 gene:SORBI_3003G073000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGGGACAACTACTTGTTGGACGACGAAGGCGAGCCGACCATGGACCTCGACGAACGG
GAGCCCTCCCCGGAGCCCCAGCCCTACGAAGACCTCGATGACGACCTCGGCGACGGCGGC
GATTGGACCCGCGGCCGCTCCCCGACCCCCGTCCACGGCGACGACGGCGGGGCGGGGTCC
TCCTCCAAGCCCCGGAAGCGCCTTCTCAAGAAGGGCGGCGGCGGTGGCGGCGGCGGCATG
CCCGGCGACGACGGGCTGGATGACTTTGCGTTGGAGGACGAGGACGCGGACCCCGCGGCT
GAGGCGAGGAAGAGGAAGGGCTCGTCGTCGCTGAGGGACCTCGCGAGGGGCGGGGCGGGC
AAGGAGAAGAAGGAGAAGAAAAGGCGGAGGGAGGATGACGGCAGGGGGAGGGATAGTGGG
ATGGTGAGGGACAGGCGGGGATCAGGAGGGAGGGACTCAGGCGGTAGGGAGGACCAGGAT
GATGGGGAGAGGGAGATCCAGGAGCTCTGGGATACCATTGCTGGTGATGATTCAGAGGAT
GACCAAGAAGGTGTTAGAACTGTAGACGATGATAATTTCATTGATGACACTGGGGTTGAT
CCAGCTGATCGTTATGGCAGCGATAATGAGCGGCATTCACCTGGACGTTATGCACAGGCT
GAGGAGGGTGAGGAGGACGATGAAATTGAGCGACTCTTCAAGGGTGGTAAGAAGAAGAAG
AAGAATGATCGCCCTCGTGCAGATATTGGTCTTATAGTGGAACAATTCATTGCCGAGTTC
GAGGTAGCAGCCGAAGAAGATGCGAACTTGAATAGGCAATCAAAGCCAGCCATTAATAAA
CTTATGAAGCTTCCTCTGCTCATAGATGTTCTCTCCAAGAAGAATCTTCAGCAGGAATTT
CTTGACCATGGAGTTCTCACTCTTCTAAAAAATTGGCTTGAGCCATTACCTGATGGAAGC
ATGCCAAACATGAATATTCGATCTGCTGTACTGAAATTATTAACTGATTTTCCAATTGAC
TTGGAGCAATATGACCGAAGGGAGCAGCTTAAGAAAAGTGGTCTCGGAAAGGTCATTATG
TTTTTGTCCAAATCTGACGAGGAGACTACTGCAAATAGGAAATTGGCTAAGGAGCTGGTT
GATAAATGGAGTCGACCAATATTTAACAAGAGCACGAGATTTGAGGACATGAGGAGATAT
GATGAGGATGAAAGAGCACCTTACAGGCGGCCACAAATGAAGAAACCTTCGTCGAGTAGC
TCTGGAATGGAATCCAGAGATGATGATCTTGATGCTGACTTTTCACAACGCAAGTCTGGG
CAAAGTAGTTCAAGGCAGCATGCTTCTAGGCCAGAAGCATCGCCTTTGGACTTCGTCATT
CGTCCACAGTCCAAAATTGACCCTGAGCAGATACGAGCTCGTGCTAAGCAGGCTGTCCAA
GACCAGCGTCGGCTGAAGATGAACAAGAAATTGCAGCAGCTGAAAGCGCCCAAGAAGAAA
AACCTTCAGGCATCGAAGCTCAGCGTGGAAGGCCGTGGCATGATCAAGTACCTGTAG

Peptide Sequence

PEP ID

EES02488
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:6193285:6198021:-1 gene:SORBI_3003G073000 transcript:EES02488 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGDNYLLDDEGEPTMDLDEREPSPEPQPYEDLDDDLGDGGDWTRGRSPTPVHGDDGGAGS
SSKPRKRLLKKGGGGGGGGMPGDDGLDDFALEDEDADPAAEARKRKGSSSLRDLARGGAG
KEKKEKKRRREDDGRGRDSGMVRDRRGSGGRDSGGREDQDDGEREIQELWDTIAGDDSED
DQEGVRTVDDDNFIDDTGVDPADRYGSDNERHSPGRYAQAEEGEEDDEIERLFKGGKKKK
KNDRPRADIGLIVEQFIAEFEVAAEEDANLNRQSKPAINKLMKLPLLIDVLSKKNLQQEF
LDHGVLTLLKNWLEPLPDGSMPNMNIRSAVLKLLTDFPIDLEQYDRREQLKKSGLGKVIM
FLSKSDEETTANRKLAKELVDKWSRPIFNKSTRFEDMRRYDEDERAPYRRPQMKKPSSSS
SGMESRDDDLDADFSQRKSGQSSSRQHASRPEASPLDFVIRPQSKIDPEQIRARAKQAVQ
DQRRLKMNKKLQQLKAPKKKNLQASKLSVEGRGMIKYL

Transcript Sequence

Transcript ID

EES02488
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:6193285:6198021:-1 gene:SORBI_3003G073000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCCGAGATGCCGACTCGATCTTTCCTCTCCTCCCACGGTCCACCGACGACAGGACTCTTC
CTTCTTCTTCCTCACCCCCGCTCCAGCTCCAGCTCGCCTCTCTCCTCTCCTCTCCTCACC
TAGGGTTTCGCTTCCCGTCTCGCCGTCGTCGCCATGGGGGACAACTACTTGTTGGACGAC
GAAGGCGAGCCGACCATGGACCTCGACGAACGGGAGCCCTCCCCGGAGCCCCAGCCCTAC
GAAGACCTCGATGACGACCTCGGCGACGGCGGCGATTGGACCCGCGGCCGCTCCCCGACC
CCCGTCCACGGCGACGACGGCGGGGCGGGGTCCTCCTCCAAGCCCCGGAAGCGCCTTCTC
AAGAAGGGCGGCGGCGGTGGCGGCGGCGGCATGCCCGGCGACGACGGGCTGGATGACTTT
GCGTTGGAGGACGAGGACGCGGACCCCGCGGCTGAGGCGAGGAAGAGGAAGGGCTCGTCG
TCGCTGAGGGACCTCGCGAGGGGCGGGGCGGGCAAGGAGAAGAAGGAGAAGAAAAGGCGG
AGGGAGGATGACGGCAGGGGGAGGGATAGTGGGATGGTGAGGGACAGGCGGGGATCAGGA
GGGAGGGACTCAGGCGGTAGGGAGGACCAGGATGATGGGGAGAGGGAGATCCAGGAGCTC
TGGGATACCATTGCTGGTGATGATTCAGAGGATGACCAAGAAGGTGTTAGAACTGTAGAC
GATGATAATTTCATTGATGACACTGGGGTTGATCCAGCTGATCGTTATGGCAGCGATAAT
GAGCGGCATTCACCTGGACGTTATGCACAGGCTGAGGAGGGTGAGGAGGACGATGAAATT
GAGCGACTCTTCAAGGGTGGTAAGAAGAAGAAGAAGAATGATCGCCCTCGTGCAGATATT
GGTCTTATAGTGGAACAATTCATTGCCGAGTTCGAGGTAGCAGCCGAAGAAGATGCGAAC
TTGAATAGGCAATCAAAGCCAGCCATTAATAAACTTATGAAGCTTCCTCTGCTCATAGAT
GTTCTCTCCAAGAAGAATCTTCAGCAGGAATTTCTTGACCATGGAGTTCTCACTCTTCTA
AAAAATTGGCTTGAGCCATTACCTGATGGAAGCATGCCAAACATGAATATTCGATCTGCT
GTACTGAAATTATTAACTGATTTTCCAATTGACTTGGAGCAATATGACCGAAGGGAGCAG
CTTAAGAAAAGTGGTCTCGGAAAGGTCATTATGTTTTTGTCCAAATCTGACGAGGAGACT
ACTGCAAATAGGAAATTGGCTAAGGAGCTGGTTGATAAATGGAGTCGACCAATATTTAAC
AAGAGCACGAGATTTGAGGACATGAGGAGATATGATGAGGATGAAAGAGCACCTTACAGG
CGGCCACAAATGAAGAAACCTTCGTCGAGTAGCTCTGGAATGGAATCCAGAGATGATGAT
CTTGATGCTGACTTTTCACAACGCAAGTCTGGGCAAAGTAGTTCAAGGCAGCATGCTTCT
AGGCCAGAAGCATCGCCTTTGGACTTCGTCATTCGTCCACAGTCCAAAATTGACCCTGAG
CAGATACGAGCTCGTGCTAAGCAGGCTGTCCAAGACCAGCGTCGGCTGAAGATGAACAAG
AAATTGCAGCAGCTGAAAGCGCCCAAGAAGAAAAACCTTCAGGCATCGAAGCTCAGCGTG
GAAGGCCGTGGCATGATCAAGTACCTGTAGATCACTCACTGTGGCATCTGCAGTCAGCAG
TGCCCTGCACATGATACAGTGCCTGCAGGGATTGCTGAATTAGTATGAAGCATCCTCCCA
CCATCCATGGCAAACAGCTCGGCATCAATAATTGCTTGGATCTTTTATCCAAGTATTTTT
CTTGCCTGGTAGGGTGCAACATCCGTGCTTCAGAAACCGGATGGTTTGGGCACTATCAAT
TGCAGAGGCTTCTACTATGAGCTTGCATAAACAATGGCGCTTCTCAAGCAGAGTGGTGCC
TTTATATTGTATAATAAATATTTATAATGCTTGAAGGGTTGAAGTTCGGTTGTTTGTACT
TGAAGGAAGTTATGCCTTGTGAAAAATCAAAACATAGTGCGACAAATGATTAATTGTGCT
TACCAAACTGTAACTCAATTTTGATAAATGGCAATTCTTGGAGTCTTCCATCTT