Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES02367
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:4229020:4237524:-1 gene:SORBI_3003G046300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCTATTCCGGTGATGCGAGTTCTATGGCCTTGTTTGCTATACCTGCGTCGAATCATC
TTCTTCGTCTGCAGATTTGTTCGAGACGCCACCCTCTACCGCCGCCGCTCGCCGCCATCC
GCGGCCATGGATCTCCTGCGTTCTCATCTCCACAAGGTCCGGATCCCGGAGCCCACCAAC
CGCATCCACAAGGACGAGTGCTGCGTCTCCTTCGACACCCCGAGGTCAGAGGGAGGCCTG
TATGTGGACATGAGCTCGTTCCTGGGCTTCGGGAGGGAGTACGTGGAGTGGAACTTCGAG
AAGACGGGGAACCCCGTGTACCTCCACATCGTGCAGCGCCGGAAGCCGGAGCCCGACGAG
GCGGATCGCCCGCTTAAGAAGCCCACCCTCCTCGCTATAGGTGTGGAAGGAGGTTTTGGT
GATCAAGAACCAGAATATGATGATACTTTTGAAATTGTCATCTTACCTGATTTTGTCTCT
CTTCCATTTCCATCAGTTGATTTGCCAGAGAAGGTTAGGCTTGCGGTTGATAAAGTTTTA
CTTGCTGAAAGTGCTGATAGGAAAGAACAATTGGCTGCTTGGGTTGCTGACAAGAAGAAC
ATTAGTGCATATGCTATGGACCTGCAACAGCTAGACAATGGTGTTGTTGTGCCTCCTACT
GGATGGAAGTGTAGCAAATGCGATAAAACTGAGAACCTCTGGATGAATTTAACTGATGGT
ATGATCCTTTGTGGGAGGAAGCTTTGGGATGGGAGTGGTGGGAATAATCATGCCATTGAA
CACTATGAACAGACTAAATACCCTCTTGCGGTAAAGCTTGGGACAATTACTGCTGATCTG
GAAGCAGCAGATGTTTTCTCATACCCTGAAGATGATAGCGTTGAAGATCCACTATTAGCT
CAGCACTTATCACATTTCGGTATCGATTTTTCTTCACTTCAAAAGACTGAGATGACTACT
GCTGAGAGAGAACTTGATGCCAACACTAATTATGACTGGAATAGAATACAAGAAAGTGGA
AAAGATGCTGAACTTTTGTTTGGACCTGGCTATACAGGTCTTGCGAATCTTGGGAATAGT
TGCTATATGGCTTCTATAATGCAAGTCATGTTTTCAACCCATCCTTTCATATCAAGATAC
TTTGAGAAACAGAGTTTGAAAGCTGCATTTGCAACTGCTCCAGCTGATCCAACAGTAGAC
CTAAACATGCAAATGACAAAACTAGGACATGGTTTGCTCTCTGGTAAATATTCTGCACCA
GCAAAGGAGGGGCAGGAAGGGATACGTCCTCGCATGTTTAAGTCAGTTATTGCCGCGAAC
CATCCTGAATTTTCTAGCATGAGACAACAGGATGCCCTCGACTTCTTCCTCCACCTTATT
GACAGAGTTGAGAAGGCAAACCCTGGGAACCATGAGCTAAATCCTTGTTCCGGTTTCAAG
TTCATTGTTGAAGAGAGGGTCCAGTGCCCTTCTGGGAAAGTTTCCTACAACAAACGGTCT
GACTATATTCTTTCTTTGAGCATACCACTGCATGAGGCAACAAATAAAGAGCAGCTAGAA
GCTTTTAATGAGAAGAAAGCTGCAATGGACTTGGATGGAAAAGAAGTGTCTAATGAGGAT
ATTGTCAGGCCTAGAGTCCCATTGGAGGCTTGCTTAGCGAGTTTTTCAGGGCCAGAGGAA
ATCCCGGATTTTTATAGCACTGCATTAAATTCGAAGACTACCGCCACTAAGACTGCTGGT
TTCAACACCTTTCCTGATTACCTTGTGTTGCACATGCGCAAGTTTGTAATGGAAGCAGGA
TGGGTGCCAAAGAAACTCGATGTTTATATAGATGTGCCAGATACGATTGATATCACACAT
ATGCGCAGCAAAGGTGTACAGCCTGGGGAAGAGCTACTACCTGAAGGAGGTTCTGGTGAC
AACAGTGCTGAGCCTGCTCACCCTGTTGCCAGTGAGGATATTGTGTCCCAACTTGCAAGC
ATGGGCTTCAACTACCTTCATTGTCAGAAAGCTGCTATTAACACATCAAACACAGGAGTT
GAGGAGGCGATGAATTGGCTCCTCTCTCACATGGATGATCCAGATATAAATGACCCAATA
TCAAAAGATTCACGTGCTTCTGAGCCGTCTGTTGATGAAGCAAGTGTTCAAACTCTCATT
TCCTTTGGATTTCAGGAAGATGTTGCCATAAAGGCCCTGAAAGCTTCTGGCGGTAATATT
GAGAAAGCAACCGACTGGATTTTCAGCCACCCCGAAGCATCGAGCTCAGCATCTGCTGAT
TCTTCCACTAGCAATGCAAATGCTGATGACGCATACATTCCAGATGGAAGTGGCAGATAC
AAGCTGATGGCGTTTGTGAGCCATATGGGCACCTCTACCCACTGCGGGCACTACGTAGCT
CATGTCCTCAAAGACGGGAGGTGGACAATCTTCAACGACAGCAAGGTCGCAGCATCAGTT
GACCTGCCCAAGGAAATGGGCTACCTCTATTTCTTTCAGAGGATTAGCAACTAG

Peptide Sequence

PEP ID

EES02367
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:4229020:4237524:-1 gene:SORBI_3003G046300 transcript:EES02367 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPIPVMRVLWPCLLYLRRIIFFVCRFVRDATLYRRRSPPSAAMDLLRSHLHKVRIPEPTN
RIHKDECCVSFDTPRSEGGLYVDMSSFLGFGREYVEWNFEKTGNPVYLHIVQRRKPEPDE
ADRPLKKPTLLAIGVEGGFGDQEPEYDDTFEIVILPDFVSLPFPSVDLPEKVRLAVDKVL
LAESADRKEQLAAWVADKKNISAYAMDLQQLDNGVVVPPTGWKCSKCDKTENLWMNLTDG
MILCGRKLWDGSGGNNHAIEHYEQTKYPLAVKLGTITADLEAADVFSYPEDDSVEDPLLA
QHLSHFGIDFSSLQKTEMTTAERELDANTNYDWNRIQESGKDAELLFGPGYTGLANLGNS
CYMASIMQVMFSTHPFISRYFEKQSLKAAFATAPADPTVDLNMQMTKLGHGLLSGKYSAP
AKEGQEGIRPRMFKSVIAANHPEFSSMRQQDALDFFLHLIDRVEKANPGNHELNPCSGFK
FIVEERVQCPSGKVSYNKRSDYILSLSIPLHEATNKEQLEAFNEKKAAMDLDGKEVSNED
IVRPRVPLEACLASFSGPEEIPDFYSTALNSKTTATKTAGFNTFPDYLVLHMRKFVMEAG
WVPKKLDVYIDVPDTIDITHMRSKGVQPGEELLPEGGSGDNSAEPAHPVASEDIVSQLAS
MGFNYLHCQKAAINTSNTGVEEAMNWLLSHMDDPDINDPISKDSRASEPSVDEASVQTLI
SFGFQEDVAIKALKASGGNIEKATDWIFSHPEASSSASADSSTSNANADDAYIPDGSGRY
KLMAFVSHMGTSTHCGHYVAHVLKDGRWTIFNDSKVAASVDLPKEMGYLYFFQRISN

Transcript Sequence

Transcript ID

EES02367
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:4229020:4237524:-1 gene:SORBI_3003G046300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCTATTCCGGTGATGCGAGTTCTATGGCCTTGTTTGCTATACCTGCGTCGAATCATC
TTCTTCGTCTGCAGATTTGTTCGAGACGCCACCCTCTACCGCCGCCGCTCGCCGCCATCC
GCGGCCATGGATCTCCTGCGTTCTCATCTCCACAAGGTCCGGATCCCGGAGCCCACCAAC
CGCATCCACAAGGACGAGTGCTGCGTCTCCTTCGACACCCCGAGGTCAGAGGGAGGCCTG
TATGTGGACATGAGCTCGTTCCTGGGCTTCGGGAGGGAGTACGTGGAGTGGAACTTCGAG
AAGACGGGGAACCCCGTGTACCTCCACATCGTGCAGCGCCGGAAGCCGGAGCCCGACGAG
GCGGATCGCCCGCTTAAGAAGCCCACCCTCCTCGCTATAGGTGTGGAAGGAGGTTTTGGT
GATCAAGAACCAGAATATGATGATACTTTTGAAATTGTCATCTTACCTGATTTTGTCTCT
CTTCCATTTCCATCAGTTGATTTGCCAGAGAAGGTTAGGCTTGCGGTTGATAAAGTTTTA
CTTGCTGAAAGTGCTGATAGGAAAGAACAATTGGCTGCTTGGGTTGCTGACAAGAAGAAC
ATTAGTGCATATGCTATGGACCTGCAACAGCTAGACAATGGTGTTGTTGTGCCTCCTACT
GGATGGAAGTGTAGCAAATGCGATAAAACTGAGAACCTCTGGATGAATTTAACTGATGGT
ATGATCCTTTGTGGGAGGAAGCTTTGGGATGGGAGTGGTGGGAATAATCATGCCATTGAA
CACTATGAACAGACTAAATACCCTCTTGCGGTAAAGCTTGGGACAATTACTGCTGATCTG
GAAGCAGCAGATGTTTTCTCATACCCTGAAGATGATAGCGTTGAAGATCCACTATTAGCT
CAGCACTTATCACATTTCGGTATCGATTTTTCTTCACTTCAAAAGACTGAGATGACTACT
GCTGAGAGAGAACTTGATGCCAACACTAATTATGACTGGAATAGAATACAAGAAAGTGGA
AAAGATGCTGAACTTTTGTTTGGACCTGGCTATACAGGTCTTGCGAATCTTGGGAATAGT
TGCTATATGGCTTCTATAATGCAAGTCATGTTTTCAACCCATCCTTTCATATCAAGATAC
TTTGAGAAACAGAGTTTGAAAGCTGCATTTGCAACTGCTCCAGCTGATCCAACAGTAGAC
CTAAACATGCAAATGACAAAACTAGGACATGGTTTGCTCTCTGGTAAATATTCTGCACCA
GCAAAGGAGGGGCAGGAAGGGATACGTCCTCGCATGTTTAAGTCAGTTATTGCCGCGAAC
CATCCTGAATTTTCTAGCATGAGACAACAGGATGCCCTCGACTTCTTCCTCCACCTTATT
GACAGAGTTGAGAAGGCAAACCCTGGGAACCATGAGCTAAATCCTTGTTCCGGTTTCAAG
TTCATTGTTGAAGAGAGGGTCCAGTGCCCTTCTGGGAAAGTTTCCTACAACAAACGGTCT
GACTATATTCTTTCTTTGAGCATACCACTGCATGAGGCAACAAATAAAGAGCAGCTAGAA
GCTTTTAATGAGAAGAAAGCTGCAATGGACTTGGATGGAAAAGAAGTGTCTAATGAGGAT
ATTGTCAGGCCTAGAGTCCCATTGGAGGCTTGCTTAGCGAGTTTTTCAGGGCCAGAGGAA
ATCCCGGATTTTTATAGCACTGCATTAAATTCGAAGACTACCGCCACTAAGACTGCTGGT
TTCAACACCTTTCCTGATTACCTTGTGTTGCACATGCGCAAGTTTGTAATGGAAGCAGGA
TGGGTGCCAAAGAAACTCGATGTTTATATAGATGTGCCAGATACGATTGATATCACACAT
ATGCGCAGCAAAGGTGTACAGCCTGGGGAAGAGCTACTACCTGAAGGAGGTTCTGGTGAC
AACAGTGCTGAGCCTGCTCACCCTGTTGCCAGTGAGGATATTGTGTCCCAACTTGCAAGC
ATGGGCTTCAACTACCTTCATTGTCAGAAAGCTGCTATTAACACATCAAACACAGGAGTT
GAGGAGGCGATGAATTGGCTCCTCTCTCACATGGATGATCCAGATATAAATGACCCAATA
TCAAAAGATTCACGTGCTTCTGAGCCGTCTGTTGATGAAGCAAGTGTTCAAACTCTCATT
TCCTTTGGATTTCAGGAAGATGTTGCCATAAAGGCCCTGAAAGCTTCTGGCGGTAATATT
GAGAAAGCAACCGACTGGATTTTCAGCCACCCCGAAGCATCGAGCTCAGCATCTGCTGAT
TCTTCCACTAGCAATGCAAATGCTGATGACGCATACATTCCAGATGGAAGTGGCAGATAC
AAGCTGATGGCGTTTGTGAGCCATATGGGCACCTCTACCCACTGCGGGCACTACGTAGCT
CATGTCCTCAAAGACGGGAGGTGGACAATCTTCAACGACAGCAAGGTCGCAGCATCAGTT
GACCTGCCCAAGGAAATGGGCTACCTCTATTTCTTTCAGAGGATTAGCAACTAG