Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES02337
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:3592327:3599329:-1 gene:SORBI_3003G038500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACGGGCGGCCACCACTTCAACAATATCCTCCTCGGGGGGCGCGGTGGCACGAACCCT
GGTCAGTTTAAAGTGTATTCTGGTGGACTTGCATGGAAGAGACAAGGTGGAGGAAAGACC
ATTGAGATTGACAAAGCTGATGTAACCGCAGTTACTTGGATGAAAGTCCCCAGAGCATAT
CAGCTTGGAGTCAGGATTAAGGATGGCCTGTTCTACCGATTTATTGGCTTCCGTGAACAG
GATGTGAGCAGCTTGACCAACTTCATACAAAAGAATATGGGTGTCACACCAGATGAAAAA
CAGCTTTCTGTTAGTGGCCACAATTGGGGAGGGATTGATATAGATGGAAACATGCTAACC
TTTATGGTTGGTTCAAAGCAAGCATTTGAAGTATCCCTAGCAGATGTTGCACAAACCCAG
ATGCAAGGAAAAACAGATGTTCTCTTAGAGCTTCATGTTGATGATACTACTGGAGCCAAT
GAGAAAGACTCCCTCATGGATTTAAGTTTTCATGTGCCTACTTCGAATACTCAGTTTGTT
GGGGATGAGAATCGCCCTCCAGCTCACATTTTATGGGAGACTATATTGAAATTTGCTGAT
GTTGGTTCTTCTGAAGAACCAGTTGTCACATTTGACGGAATTGCGATTCTTACACCAAGA
GGACGTTATAGTGTTGAGCTTCATCTGTCATTTCTGCGACTCCAAGGACAAGCTAATGAT
TTCAAAATCCAATACAGCAGCATCGTTCGCCTCTTTCTTTTGCCAAAGTCAAACAATCCT
CATACATTTGTTGTTATCACTCTTGATCCACCAATCCGTAAAGGACAAACATTGTATCCT
CACATTGTTATTCAGTTTGAGACAGAGGCAGTAGTTGAAAGAGACCTGGCATTGAGTAAA
GAGCTGTTGGTTGACAAATACAAGGACAGGCTTGAGGAATCTTACAAGGGTCTAATACAT
GAGGTATTTACCAAAGTCCTCCGTGGTCTATCTGGTGCTAAAGTCACAAGGCCAGGTTCT
TTCAGAAGTTGCCAAGATGGATATGCAGTTAAATCATCACTCAAAGCTGAAGATGGACTG
TTATATCCACTTGAAAAGGGTTTCTTCTTCTTGCCAAAGCCACCTACACTCATTCTTCAT
GAGGAGATTGAGTTTGTTGAATTTGAACGTCATGGTGCTGGGGGTGCCAGTATATCATTT
CACTATTTTGACCTCCTTGTCAAACTGAAAAATGACCAAGAGCATCTCTTCAGAAATATT
CAAAGGAATGAGTACCACAACCTCTTCAACTTCATCAATGGAAAGAACATTAAAATAATG
AACCTTGGAGGAGATGGTCAAGGTGCAAGTGGTGTAGTTACAGATGTTCTACGAGACACT
GATGATGATGCTGTTGATCCACATCTAGAGCGTATTAAGAATCAGGCTGGGGATGATGAA
AGTGATGAAGAGGATGAAGATTTTGTTGCAGATAAGGATGATAGTGGATCTCCTACTGAT
GACTCGGGTGATGAGGATTCAGATGCTAGTGATAGTGGTGGTGAAAAAGAGAAATCATCC
AAGAAGGAAGCAAGCAGTTCAAAGCCAGTTCAGAAAAGGAAGCCTAAGGCCAGGGATGAC
GAAGGGCATGAGAAGAAAAAGGCAAAGAAGAAAAAAGATCCTAATGCCCCCAAAAGAGCA
ATGACACCGTTCATGTATTTCTCAATGGCTGAACGAGGAAACATGAAGAGCAGCAACCCA
GATTTGCCGACGACTGAGATTGCAAAGAAGCTTGGGGAGATGTGGCAAAAGATGTCAAGC
GAAGAGAAGCAGCCTTACATCCAGCAGGCCCAGGTCGACAAGAAACGTTATGAAAAAGAG
TCTGCCGTCTATCGTGGTGAAGCTACAGCTGATGTGGATTCTGGCAACGAGTCTGACTAG

Peptide Sequence

PEP ID

EES02337
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:3592327:3599329:-1 gene:SORBI_3003G038500 transcript:EES02337 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTGGHHFNNILLGGRGGTNPGQFKVYSGGLAWKRQGGGKTIEIDKADVTAVTWMKVPRAY
QLGVRIKDGLFYRFIGFREQDVSSLTNFIQKNMGVTPDEKQLSVSGHNWGGIDIDGNMLT
FMVGSKQAFEVSLADVAQTQMQGKTDVLLELHVDDTTGANEKDSLMDLSFHVPTSNTQFV
GDENRPPAHILWETILKFADVGSSEEPVVTFDGIAILTPRGRYSVELHLSFLRLQGQAND
FKIQYSSIVRLFLLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVERDLALSK
ELLVDKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDGL
LYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISFHYFDLLVKLKNDQEHLFRNI
QRNEYHNLFNFINGKNIKIMNLGGDGQGASGVVTDVLRDTDDDAVDPHLERIKNQAGDDE
SDEEDEDFVADKDDSGSPTDDSGDEDSDASDSGGEKEKSSKKEASSSKPVQKRKPKARDD
EGHEKKKAKKKKDPNAPKRAMTPFMYFSMAERGNMKSSNPDLPTTEIAKKLGEMWQKMSS
EEKQPYIQQAQVDKKRYEKESAVYRGEATADVDSGNESD

Transcript Sequence

Transcript ID

EES02337
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:3592327:3599329:-1 gene:SORBI_3003G038500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTACCGCCTCCGCACCGCAGAGCCGCAGCGAAGCAAGCTGCGCCCCTCGACTTGGCCTCG
CCGGAGAAGCGGAGCTCGAGTAGAGGCGGCGCGCGGGAGATAGCAAGCAGTCGGCCGCTG
GTGCCGCGTCGGCGGAGATGACGGGCGGCCACCACTTCAACAATATCCTCCTCGGGGGGC
GCGGTGGCACGAACCCTGGTCAGTTTAAAGTGTATTCTGGTGGACTTGCATGGAAGAGAC
AAGGTGGAGGAAAGACCATTGAGATTGACAAAGCTGATGTAACCGCAGTTACTTGGATGA
AAGTCCCCAGAGCATATCAGCTTGGAGTCAGGATTAAGGATGGCCTGTTCTACCGATTTA
TTGGCTTCCGTGAACAGGATGTGAGCAGCTTGACCAACTTCATACAAAAGAATATGGGTG
TCACACCAGATGAAAAACAGCTTTCTGTTAGTGGCCACAATTGGGGAGGGATTGATATAG
ATGGAAACATGCTAACCTTTATGGTTGGTTCAAAGCAAGCATTTGAAGTATCCCTAGCAG
ATGTTGCACAAACCCAGATGCAAGGAAAAACAGATGTTCTCTTAGAGCTTCATGTTGATG
ATACTACTGGAGCCAATGAGAAAGACTCCCTCATGGATTTAAGTTTTCATGTGCCTACTT
CGAATACTCAGTTTGTTGGGGATGAGAATCGCCCTCCAGCTCACATTTTATGGGAGACTA
TATTGAAATTTGCTGATGTTGGTTCTTCTGAAGAACCAGTTGTCACATTTGACGGAATTG
CGATTCTTACACCAAGAGGACGTTATAGTGTTGAGCTTCATCTGTCATTTCTGCGACTCC
AAGGACAAGCTAATGATTTCAAAATCCAATACAGCAGCATCGTTCGCCTCTTTCTTTTGC
CAAAGTCAAACAATCCTCATACATTTGTTGTTATCACTCTTGATCCACCAATCCGTAAAG
GACAAACATTGTATCCTCACATTGTTATTCAGTTTGAGACAGAGGCAGTAGTTGAAAGAG
ACCTGGCATTGAGTAAAGAGCTGTTGGTTGACAAATACAAGGACAGGCTTGAGGAATCTT
ACAAGGGTCTAATACATGAGGTATTTACCAAAGTCCTCCGTGGTCTATCTGGTGCTAAAG
TCACAAGGCCAGGTTCTTTCAGAAGTTGCCAAGATGGATATGCAGTTAAATCATCACTCA
AAGCTGAAGATGGACTGTTATATCCACTTGAAAAGGGTTTCTTCTTCTTGCCAAAGCCAC
CTACACTCATTCTTCATGAGGAGATTGAGTTTGTTGAATTTGAACGTCATGGTGCTGGGG
GTGCCAGTATATCATTTCACTATTTTGACCTCCTTGTCAAACTGAAAAATGACCAAGAGC
ATCTCTTCAGAAATATTCAAAGGAATGAGTACCACAACCTCTTCAACTTCATCAATGGAA
AGAACATTAAAATAATGAACCTTGGAGGAGATGGTCAAGGTGCAAGTGGTGTAGTTACAG
ATGTTCTACGAGACACTGATGATGATGCTGTTGATCCACATCTAGAGCGTATTAAGAATC
AGGCTGGGGATGATGAAAGTGATGAAGAGGATGAAGATTTTGTTGCAGATAAGGATGATA
GTGGATCTCCTACTGATGACTCGGGTGATGAGGATTCAGATGCTAGTGATAGTGGTGGTG
AAAAAGAGAAATCATCCAAGAAGGAAGCAAGCAGTTCAAAGCCAGTTCAGAAAAGGAAGC
CTAAGGCCAGGGATGACGAAGGGCATGAGAAGAAAAAGGCAAAGAAGAAAAAAGATCCTA
ATGCCCCCAAAAGAGCAATGACACCGTTCATGTATTTCTCAATGGCTGAACGAGGAAACA
TGAAGAGCAGCAACCCAGATTTGCCGACGACTGAGATTGCAAAGAAGCTTGGGGAGATGT
GGCAAAAGATGTCAAGCGAAGAGAAGCAGCCTTACATCCAGCAGGCCCAGGTCGACAAGA
AACGTTATGAAAAAGAGTCTGCCGTCTATCGTGGTGAAGCTACAGCTGATGTGGATTCTG
GCAACGAGTCTGACTAGATTCAAGCTCTTGGAGATGGTGGCACTGAATGAAATTCTAGTG
GCATGTACTATTATTACGTCGGCAACTGTTGCCGCTAGGTGAAATTGCTAGCATGCGTGT
GCGCGCGCCCTACGGTGCCGGCACTAGTAGTTTGCCTCCAGCATTGCTGACAGTAAAGAG
GGGGTTTCTTGTAGCGTACCTCTGCAGGGCAAAAGATTGTATGAGTGTAGAGTCTAGTGA
CTTTTGTGGAAAAACCAACATACGTGGTTTATGAGACATGGTATTTGTGTTGAAGCTTCT
TTATTTTTCCCCAAGGGACGAAAATTGATCTATTGATGATGGCTGTTTTGCCTGATCT