Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES02294
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:2548860:2563326:-1 gene:SORBI_3003G029100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCTGACATGGAGTCCGTCGCAGCCCTTATGGACTCGACAAGCTCCAAGATACAGCAG
CTTCAGGAGGCATTTGCTGAGCTTGAGAGCCAGAGTGCTGTCTCCATGAACCTTAAGTGG
AAGCAGCTTGAAGACCACTTTCGTGGCCTTGAACAGTCCCTCAAGAAAAAGTTTGACGAG
CTAAAAGAGCAGGAGGAGGAGTTCCAGGAGATTGTCGCAAAATCAGATCTGATGCTGGAG
CAGCGGGAGGCAGCTGTTGTGGCCAAGGAACTGACCTCTCTGGAGAGGTTGCAGGAGAAG
AGGGATGCTGCATTAGCTATGATCTTTAGCAAGTCTAGGCTTTCCTTACCTGTTCCTGCC
ATCAATCCAATGAACAAGGCACTGGATAATCTTGGTGTCAAGTGGCCTAAACCGGCTTCT
GAAGAGAGTGTGCACTTGCAAGATGGTAATGCTGCAGTGAGGCCTCGTTCTGAGCTTGCC
TCACTCTGTGAGGAAATGAATGTTAAGGGGCTTCATAAGTTCATATCCGACAACAGGAAG
AACTTGGCAGCCATCCGCGAGGAAATTCCCAGTGCACTGAAGAAAACATCTGATCCTTAT
GGCTTGGTGTTGGATTCCCTGGAAGACTTCTATTCTGGAGATAATCTTGTATTAGATGGC
AAAAAGGATGGAGACCTTCTGGGTGTTAGAAGGACCTGCCTGATGTTGATGGAGTCACTT
GGACAGCTGCAAACTAATAATATAACTTGTTTCTCTTTGGAGGGGCACATGCTTACAACT
AATATCGTAGAGCGAGCAAAGAAGATTGCATTTGAGTGGAAGTCCAAGTTAGATAATCTT
GACATTGATGCTAGTAATGGGAACTGTCTTGAAGCTCATGCATTTCTTCAACTCCTGGCA
ACCTTTGGTATTTCTGCTGAATATAACGAAGATGACCTGTGCAAATTGCTTCCATATGTC
AGTCGTCGTCGTCAGACACCTGAACTTTGTCGATTGCTTGGGTTGTCGCAGAAAATGCCA
GGTGTCATTGAAGTTCTGGTGGAAAGTGGAAGACCTATTGATGCAATTAATTTGGCTTAT
GTGTTTGAGCTTACTGAACAGTTTGAGCCAGTGCAACTGCTTAAAGCATATCTGAGGGAT
GTTAAGAAAGTGTCACATGCCAGGAATGTCAAAGGTTCTCCTGGGGCACAGAATGAGATG
AATGAACGCGAGTTGTCTGCACTGAAATCTGTCATTAAGTGCATTGAAGAGCACAAGCTT
GAGGAGCAGTACCCTGTGGATCCACTTCAGAAAAGGGTTTTGCAGCTAGAGAAAGCAAAG
GCAGACAAGAGGAGGGCTGTTGAAGCAGCAAAGCCACAGTCCAAGCGGCCTCGTGCCAAT
GGATCGGCCTTTGCACACCGTGCTACAGGCTTTGCTGACAAGAGCTTCTACCCAGCAGCA
GCAACCCCAGAGAGGCATCCCTCCAATCCTTACGAGAGGCAGTTTGTGTATGGTGCTGAG
GCTCATCTTCCACCAATGGTGAGCTCAGCGTCTTACACCATGCAACCTGCCCACGGACCT
TATTACGGTAATGGCTACCCAGTTCAGTACCAGGTCCCGTATATCCACTAA

Peptide Sequence

PEP ID

EES02294
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:2548860:2563326:-1 gene:SORBI_3003G029100 transcript:EES02294 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPDMESVAALMDSTSSKIQQLQEAFAELESQSAVSMNLKWKQLEDHFRGLEQSLKKKFDE
LKEQEEEFQEIVAKSDLMLEQREAAVVAKELTSLERLQEKRDAALAMIFSKSRLSLPVPA
INPMNKALDNLGVKWPKPASEESVHLQDGNAAVRPRSELASLCEEMNVKGLHKFISDNRK
NLAAIREEIPSALKKTSDPYGLVLDSLEDFYSGDNLVLDGKKDGDLLGVRRTCLMLMESL
GQLQTNNITCFSLEGHMLTTNIVERAKKIAFEWKSKLDNLDIDASNGNCLEAHAFLQLLA
TFGISAEYNEDDLCKLLPYVSRRRQTPELCRLLGLSQKMPGVIEVLVESGRPIDAINLAY
VFELTEQFEPVQLLKAYLRDVKKVSHARNVKGSPGAQNEMNERELSALKSVIKCIEEHKL
EEQYPVDPLQKRVLQLEKAKADKRRAVEAAKPQSKRPRANGSAFAHRATGFADKSFYPAA
ATPERHPSNPYERQFVYGAEAHLPPMVSSASYTMQPAHGPYYGNGYPVQYQVPYIH

Transcript Sequence

Transcript ID

EES02294
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:2548860:2563326:-1 gene:SORBI_3003G029100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GAGGACACCGGGATCCCGCGGCTCGGGCACGAGCACCACGAACTTTCTTCTCCGCCGTCC
CACCGCTCCCGCTCGGAGCCGTCGCGCCGCCGAGCGACGGCGCGCATCCGCCTCCCTAGC
TCCGCCTCTCCCGCCCTGCCTCCGTCGCCGTTCCGCCTCTCATCGCCGCCCCGCCTCTCT
CCGTCGTTCCTGGTCGCCGGGCTTCTTCTCCGTCGACGGCTACGCGCGTGAGGAGGAGGG
AGGAAGAGTCGCAGCGCGTGGATCCAGGGGCAGCGGCGTCCATCCCGCGTGAGAAGGGAG
AAGGAGCCGGTGAGATCTACTTTTTTCAGCTCCTCCATCTCTCGCAGCTCTCTCTCAGCG
CGTTTTGCGGAGATTCGTCGGTGGAGCTAGTTGCTCTGAACCCAACGGGGCCGATCTTCC
TCACAGCGCCGGCGCTCCATCTTCCGTCATCCCCCCCCCTCCCCTTGGCACACACACACG
CGCTCGGACGCAAACGACGGCGGCGGGGCAGTCCCAGGCTCGGCGGCGTCGTCAGCGGCT
CCCCCTCCAGCCTCGGCGCCTCGCGCCCTTGTCAAGGCGGTCGCGCCGCTTTGGGAGCGC
TTATGCCCCAAAGCGAGGCGTTGCCTGTCCGCTTAGCGTTGAAGCGTGCGCTCAGTGCCG
CTTTTTGGAACCCTAATCAAGAAATTGATATGATTTGTAAGGTTTTGGGTGTTTCTTCTG
TTAGGATTTATACCCTCTTTCGGATGTGCTGTATTCTTTGTTGCAGGAGCATTTGCTATG
CCTGACATGGAGTCCGTCGCAGCCCTTATGGACTCGACAAGCTCCAAGATACAGCAGCTT
CAGGAGGCATTTGCTGAGCTTGAGAGCCAGAGTGCTGTCTCCATGAACCTTAAGTGGAAG
CAGCTTGAAGACCACTTTCGTGGCCTTGAACAGTCCCTCAAGAAAAAGTTTGACGAGCTA
AAAGAGCAGGAGGAGGAGTTCCAGGAGATTGTCGCAAAATCAGATCTGATGCTGGAGCAG
CGGGAGGCAGCTGTTGTGGCCAAGGAACTGACCTCTCTGGAGAGGTTGCAGGAGAAGAGG
GATGCTGCATTAGCTATGATCTTTAGCAAGTCTAGGCTTTCCTTACCTGTTCCTGCCATC
AATCCAATGAACAAGGCACTGGATAATCTTGGTGTCAAGTGGCCTAAACCGGCTTCTGAA
GAGAGTGTGCACTTGCAAGATGGTAATGCTGCAGTGAGGCCTCGTTCTGAGCTTGCCTCA
CTCTGTGAGGAAATGAATGTTAAGGGGCTTCATAAGTTCATATCCGACAACAGGAAGAAC
TTGGCAGCCATCCGCGAGGAAATTCCCAGTGCACTGAAGAAAACATCTGATCCTTATGGC
TTGGTGTTGGATTCCCTGGAAGACTTCTATTCTGGAGATAATCTTGTATTAGATGGCAAA
AAGGATGGAGACCTTCTGGGTGTTAGAAGGACCTGCCTGATGTTGATGGAGTCACTTGGA
CAGCTGCAAACTAATAATATAACTTGTTTCTCTTTGGAGGGGCACATGCTTACAACTAAT
ATCGTAGAGCGAGCAAAGAAGATTGCATTTGAGTGGAAGTCCAAGTTAGATAATCTTGAC
ATTGATGCTAGTAATGGGAACTGTCTTGAAGCTCATGCATTTCTTCAACTCCTGGCAACC
TTTGGTATTTCTGCTGAATATAACGAAGATGACCTGTGCAAATTGCTTCCATATGTCAGT
CGTCGTCGTCAGACACCTGAACTTTGTCGATTGCTTGGGTTGTCGCAGAAAATGCCAGGT
GTCATTGAAGTTCTGGTGGAAAGTGGAAGACCTATTGATGCAATTAATTTGGCTTATGTG
TTTGAGCTTACTGAACAGTTTGAGCCAGTGCAACTGCTTAAAGCATATCTGAGGGATGTT
AAGAAAGTGTCACATGCCAGGAATGTCAAAGGTTCTCCTGGGGCACAGAATGAGATGAAT
GAACGCGAGTTGTCTGCACTGAAATCTGTCATTAAGTGCATTGAAGAGCACAAGCTTGAG
GAGCAGTACCCTGTGGATCCACTTCAGAAAAGGGTTTTGCAGCTAGAGAAAGCAAAGGCA
GACAAGAGGAGGGCTGTTGAAGCAGCAAAGCCACAGTCCAAGCGGCCTCGTGCCAATGGA
TCGGCCTTTGCACACCGTGCTACAGGCTTTGCTGACAAGAGCTTCTACCCAGCAGCAGCA
ACCCCAGAGAGGCATCCCTCCAATCCTTACGAGAGGCAGTTTGTGTATGGTGCTGAGGCT
CATCTTCCACCAATGGTGAGCTCAGCGTCTTACACCATGCAACCTGCCCACGGACCTTAT
TACGGTAATGGCTACCCAGTTCAGTACCAGGTCCCGTATATCCACTAATGGGAGACAGCC
AGGTGCAGGTGCTCGTTCCTAACTATCTAGCTTAACCTGCTGCCCACTGTTGTAGTCGTA
TCATCAGTTACTCTGCTAGTTTGCCTAGCTGGAAATAGTTGGACCACTCAATATGTGTGT
TTCTGAGTGGCTGTTGTGAAATCTGTTAATTTTATGCCCTAATGACATGACATAAATCAC
TCCTAATATTTAGCTATCGATGGATATCCCTACGTACTTCATTCGCCGTCTTGTGGTGTT
CATGAAAATTAGTTATTTTGATTTG