Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES02292
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:2516293:2523840:-1 gene:SORBI_3003G028600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCTATGCCAGGCGGCGAGCCAGATGGGGATTAGAATCGTCATCCTCGACCCCCTTCCG
GGCTGCCCCGCGAGCTCGGTTTGTGATGAGCACGTCGTCGGGAGCTTCACTGATGGGGAC
ACGGTCCGGGAGTTCGCCAAGAAGTGTGGGGTCCTAACAGTAGAGATTGAGCATGTTGAT
GCCGCCACACTTGAGAGGCTGGAAAAACAGGGTGTTGACTGCGAGCCTAAAGCCTCCACA
ATCATGATTATTCAGGACAAGTACAGGCAGAAAAGGCATTTCTCAAAATGTGGGATCCCA
TTGCCTGACTTCATGGAAGTAGATACTTTACACAGTATAGAGGAAGCTGGGGAAAAGTTT
GGTTATCCCCTAATGGTAAAAAGCAAGAGATTAGCATATGATGGTCGAGGCAATGCTGTA
GCCAAGACCAAAGAGGAGCTATCTTCTGTTGTTGCTTCACTGGGTGGGTTTGAGCATGGC
TTGTATGTTGAGAGGTGGACTCCTTTCGTAAAGGAGCTTTCTGTAATTGTGGCAAGGAGC
AGAGACAGCTCTACTGTCTGCTATCCTGTTGTTGAAACAATTCACAAGGAAAACATATGT
CATGTTGTTGAAGCACCTGCTGAGGTATCTGACAAAATAAAGAAGTTGGCTACTAGCGTG
GCTGAAAAAGCTATCAAGTCATTAGAAGGAGCTGGTGTTTTTGCTGTAGAGTTATTTTTA
ACAGAAGAAGATCAGATTTTAGTGAATGAAGTAGCCCCTAGGCCTCACAACAGTGGGCAT
CACACAATAGAGTCATGCTACACCTCACAATATGAGCAGCATTTACGTGCTATTCTTGGC
CTTCCTCTTGGTGACCCCTCAATGAAAGCACCTGCAGCAATAATGTACAACATCCTGGGT
GAGGATGAGGGTGAGACAGGATTCTATCTGGCTCATCAGCTTATCAGGCGGGCACTAAAC
ATTCCAGGCGCATCAATCCATTGGTATGCAAAGCCAGAGATGCGGAAGCAAAGGAAGATG
GGTCATATTACAATTGTGGGGTCTTCTAAGACAAGTGTAAAATCACGCTTGGATAATTTG
CTGCAAAGCAACTCGTCTGATCCCAAGCAAGTTAGCCCTCGTGTCGCTATTATAATGGGA
TCTCAGTCTGATCTTCCTGTGATGAAAGATGCTGAGAGGGTTTTGAAAGAGTTCAACATA
TCTTATGAGCAAACTATTGTTTCTGCACATCGTACACCAGAGCGGATGTATGATTATGCG
AAATCGGCTAAAGACAGAGGTTTTGAGGTCATAATTGCAGGTGCAGGTGGAGCAGCTCAT
TTACCAGGGATGGTAGCTTCATTGACCTCTCTTCCAGTAATTGGTGTTCCCATCAAGACT
TCAACACTATCAGGATTTGATTCCCTCCTATCTATTGTGCAAATGCCAAAAGGTATTCCT
GTTGCGACTGTTGCTATCGGGAATGCAGAAAATGCAGGTTTGCTGGCAGTTAGGATTCTG
GCCGCAAGAGATCCGGAGCTTTGGGACAGGGTAACTAAGTACCAAAATGATCTGAGGGAT
ATGGTTTTGGAGACAGCAGAAAGGCTGGAGGACCTAGGTTCGCAGGAATTTCTGAAGGGA
ATGGCTTGA

Peptide Sequence

PEP ID

EES02292
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:2516293:2523840:-1 gene:SORBI_3003G028600 transcript:EES02292 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MLCQAASQMGIRIVILDPLPGCPASSVCDEHVVGSFTDGDTVREFAKKCGVLTVEIEHVD
AATLERLEKQGVDCEPKASTIMIIQDKYRQKRHFSKCGIPLPDFMEVDTLHSIEEAGEKF
GYPLMVKSKRLAYDGRGNAVAKTKEELSSVVASLGGFEHGLYVERWTPFVKELSVIVARS
RDSSTVCYPVVETIHKENICHVVEAPAEVSDKIKKLATSVAEKAIKSLEGAGVFAVELFL
TEEDQILVNEVAPRPHNSGHHTIESCYTSQYEQHLRAILGLPLGDPSMKAPAAIMYNILG
EDEGETGFYLAHQLIRRALNIPGASIHWYAKPEMRKQRKMGHITIVGSSKTSVKSRLDNL
LQSNSSDPKQVSPRVAIIMGSQSDLPVMKDAERVLKEFNISYEQTIVSAHRTPERMYDYA
KSAKDRGFEVIIAGAGGAAHLPGMVASLTSLPVIGVPIKTSTLSGFDSLLSIVQMPKGIP
VATVAIGNAENAGLLAVRILAARDPELWDRVTKYQNDLRDMVLETAERLEDLGSQEFLKG
MA

Transcript Sequence

Transcript ID

EES02292
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:2516293:2523840:-1 gene:SORBI_3003G028600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGGTGGTCCGCCGGTGCACGGCGTCTGCAACACCGTCGTCGGAGTCCTCGGGGGAGGCCA
GCTCGGGAAGATGCTATGCCAGGCGGCGAGCCAGATGGGGATTAGAATCGTCATCCTCGA
CCCCCTTCCGGGCTGCCCCGCGAGCTCGGTTTGTGATGAGCACGTCGTCGGGAGCTTCAC
TGATGGGGACACGGTCCGGGAGTTCGCCAAGAAGTGTGGGGTCCTAACAGTAGAGATTGA
GCATGTTGATGCCGCCACACTTGAGAGGCTGGAAAAACAGGGTGTTGACTGCGAGCCTAA
AGCCTCCACAATCATGATTATTCAGGACAAGTACAGGCAGAAAAGGCATTTCTCAAAATG
TGGGATCCCATTGCCTGACTTCATGGAAGTAGATACTTTACACAGTATAGAGGAAGCTGG
GGAAAAGTTTGGTTATCCCCTAATGGTAAAAAGCAAGAGATTAGCATATGATGGTCGAGG
CAATGCTGTAGCCAAGACCAAAGAGGAGCTATCTTCTGTTGTTGCTTCACTGGGTGGGTT
TGAGCATGGCTTGTATGTTGAGAGGTGGACTCCTTTCGTAAAGGAGCTTTCTGTAATTGT
GGCAAGGAGCAGAGACAGCTCTACTGTCTGCTATCCTGTTGTTGAAACAATTCACAAGGA
AAACATATGTCATGTTGTTGAAGCACCTGCTGAGGTATCTGACAAAATAAAGAAGTTGGC
TACTAGCGTGGCTGAAAAAGCTATCAAGTCATTAGAAGGAGCTGGTGTTTTTGCTGTAGA
GTTATTTTTAACAGAAGAAGATCAGATTTTAGTGAATGAAGTAGCCCCTAGGCCTCACAA
CAGTGGGCATCACACAATAGAGTCATGCTACACCTCACAATATGAGCAGCATTTACGTGC
TATTCTTGGCCTTCCTCTTGGTGACCCCTCAATGAAAGCACCTGCAGCAATAATGTACAA
CATCCTGGGTGAGGATGAGGGTGAGACAGGATTCTATCTGGCTCATCAGCTTATCAGGCG
GGCACTAAACATTCCAGGCGCATCAATCCATTGGTATGCAAAGCCAGAGATGCGGAAGCA
AAGGAAGATGGGTCATATTACAATTGTGGGGTCTTCTAAGACAAGTGTAAAATCACGCTT
GGATAATTTGCTGCAAAGCAACTCGTCTGATCCCAAGCAAGTTAGCCCTCGTGTCGCTAT
TATAATGGGATCTCAGTCTGATCTTCCTGTGATGAAAGATGCTGAGAGGGTTTTGAAAGA
GTTCAACATATCTTATGAGCAAACTATTGTTTCTGCACATCGTACACCAGAGCGGATGTA
TGATTATGCGAAATCGGCTAAAGACAGAGGTTTTGAGGTCATAATTGCAGGTGCAGGTGG
AGCAGCTCATTTACCAGGGATGGTAGCTTCATTGACCTCTCTTCCAGTAATTGGTGTTCC
CATCAAGACTTCAACACTATCAGGATTTGATTCCCTCCTATCTATTGTGCAAATGCCAAA
AGGTATTCCTGTTGCGACTGTTGCTATCGGGAATGCAGAAAATGCAGGTTTGCTGGCAGT
TAGGATTCTGGCCGCAAGAGATCCGGAGCTTTGGGACAGGGTAACTAAGTACCAAAATGA
TCTGAGGGATATGGTTTTGGAGACAGCAGAAAGGCTGGAGGACCTAGGTTCGCAGGAATT
TCTGAAGGGAATGGCTTGACCACTTGAAGCCTTGGCTGGGACGAATATATATGGATGGCG
ATAGCTCCCTGCCCACTTTCATTCAGCGTCGATCAGCGCGGATAGCTGGATCATAGTCAC
AAAGTTTCTGGGTCGATAGGGTCGTGGTACGTGGTACACTACTTGTGAGAAATTTTTACA
CTTCGGGTCGAAAATGAACCTGTGAACCTGGGTCGAGGGTCGAAGGCGGTGAACCCGTTT
TATGTGACTGAGCTGGATATGGTCCAAGATTGGGAGTGGTCCTGAAGATCCTTACATGTT
TGGGCCGCAGTTCGATTTTCCTCACAATTCTTTTTGGTTATTGTGCTATCTTAGGAATTT
GTCAACTCATCCGTAATATATGTTCAGTATCACCATAGTTTTAATACGTACACCAGACCA
GTGAAAAAAAATCAATCCATTTACATTTTGGGCAAAAGCCTTTCATAATCTTACATGATA
AGGTACATGGTTAAAGATCAGAGAATAGATCTTGGTCTAGATAGAGATGTGTCAATTGTG
TAAGATGGACAATAGAAGGTGGAATGACCCCACTTAATTTGTTTGATGAAAGGTTTAGGG
CCTGTTTAGATGCAGCCAAACAACCAAAATTTTTGGAGAAATGAGCACTTTTTGGAAGAA
TGGATCTAAACAGGGGCTTGTAAAACTTGGCTGTAAAGATTTGGAATTTGGGACCTTGGA
GCTCCAAAACTGTGTAAACTTGCTTGGGGACCCGTGTCATGTGTCTTGCAGATCAAAAAA
TTTGGAAAGCATCTAAACACATACTTGAATGTAAAGTTTACAGCCAAAAGTTTTGGGATG
TAAAGATTTGGGATCTAAACAGGCCCTTAGCAAGTGTGTTTTCTCAAGTTGCCAAACTCA
TTAGGAATTCTGCCTTGGAAATCGTTATGGCTAAGGTAG