Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES02175
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:415543:419828:-1 gene:SORBI_3003G004300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTTCACGCATGACGCCTTCCAAGAGGCCGTTTCAGAAAAATTCTTCAGACTACAAT
GGCCGGGGCAAGTGGCAGAAGACAAAGCATTCTTCTCCACACAAGTCTCAGTTCAAAATT
GAGCCTGGTGTTCCCTTTTTTCGTATTCTCTGCCCAGCTTCAAAATCTGGTAATGTAATT
GGCAAAGGAGGTGCCATTATTGCAAAGATACGGGAAGAAACCAGGATGAGAATCAGGGTT
GATAGAGCAGCCCCCGGCTGCGATGAGAGAGTTATTTTTATAACTGCTGTTGACAAGGAT
GAAGAAGCTAGCAGCGAACGAGGCGTAGAGAATGACCGAGGTGTTGCTGCTTCTACTGGT
GCTGGCCATGATAGGGATGGAGATAACAGCAAGGAGGGAAATGATGATCCAGAGGGAAAC
AACAGCAAGGAACAGAATGATGATTCGGAGAAAGGAAACGGTAAGGAAGAAGAAGACGGT
TTGGAGAAAGACCACAGTACTGAAGAAAAGGATGATTCAGAGAAAGACCACATTAGGGAA
GAGAAGGATCATTCAGAGAAAGAACATGATAAGGAAGAAAAGGATGATCCTTTTGTTGCA
AAAGTTGCAGAGTCAGAACCAGAGAGGGTAATACCATCGGCACTAAAGGCCATTTCGCTT
GTCTTTGATAGGATTTTTGCAGCTGGAGATAATAATGAAACTGGGAATGCGTCTGCTGCA
AGCACTCCTGTTTCTTTGCGATTGTTGGTGCTGTACAGCCAAGCAGGTTGGCTCTTGGGT
AAGGGTGGTAGTGTGATTAAGCAAATGTCAGCTGATAACGGCTGTGAAATCCGTGTTTTG
AGAGACAACCTTCCATCATGTGCATTATTGAATGACAAACTTTGCCAGATCACTGGAGAG
ATTGACTCAGTAAGGAAAGGTCTCAATGCTGTATCTGAATTGCTCTTAGCTCATCCACCC
AAGGAAACTGATGCAGTTTCTGGTGTTCATTCTTCTGGATCATCATCACGTTCTTTGTTC
AACCAGTCTGATGGTCTTCCTTCAGGAATGCAATCTAACTTCCATATCCCTTTGCAAGGA
CCATCCCAAGCCAATGGACCTTTTGATATCATTGATCTTCAACCTCCGATACATGGCCAT
GCCTCAGTGCCTATAGAATCCCTCTCCTTTAGGATGCTGTGTCCACAAGACAAGGTTGGC
AGTATAATAGGCAAGGGTGGAAATATTGTTAAAACTATTCAAAAGGATACGGGCTGTGAA
ATTAAAGTTCTTGACACTGTTCCAAAATCAGAAGATCGCATCATAAGTATATCTGGACCT
GCGCATCCGAGTGATGGAATTTCCCCTGCACAGAATGCCATTCTGCATGTGCAGCGTAAA
ATTATGTTACCTACCTCTGATAAGAAGGAAGGTCCTGCAATATGTAGGCTGATCGTTTCA
GCAAACCAAGTTGGTTGTGTTCTCGGCAAAGGTGGTAGTATCATAGCTGAAATGAGGAAG
CTGTCAGGAGCATTTATAATAGTGTTGAGCAAAGACAAGATTCCAAGGGGTGTCCCAGAG
CATGATGAAGTTGTTCAGATAAGCGGGAGTTGTGAAGCTATTCAAGAAGCTCTAATGCAG
ATTACTGCTAGGCTTCGCAACCACCTTTTCCGGGTGGACAGAATGCCTGCAATGGGGCCT
AATATGCGGCCACCTTTTGGTTTGTTAGATTCTCAGTTTGGTCCATTTGCGGGAAACCAT
GAATCTCCATCCCTGTTTCATAAAGATTTTATGGGACGGCCATTGGATGGGATCTCTGCT
CCTTGGACAGTGAAGGGCATGCGTGATCTCAGCGATCCATTGTCAATATCTGATATACCT
GGAGCAGGGCATAGAGAAGCTGGTGGATTTTCTGGTCCTGGTCAGCCATCTATGATGCCA
AACTTGACTGCAGAGGTCTTAGTTCCAAGATTAATTATCCCTGCTCTCTGTAGTGAGGAT
GGAGGTTGTTTGGATAGGATTCGTGAGTTTTCTGAAGCTAAGATAACTGTTGCTGAACCT
ATAGCCGATGCAATGGACATTCCTGTTTTGATATCTGGCACACCAGACCAGATGCATGCA
GCCCGAAGTCTTGTTCAAGCATTTGTCATGAGCGAATCATTTGCCCCATAA

Peptide Sequence

PEP ID

EES02175
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:415543:419828:-1 gene:SORBI_3003G004300 transcript:EES02175 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASRMTPSKRPFQKNSSDYNGRGKWQKTKHSSPHKSQFKIEPGVPFFRILCPASKSGNVI
GKGGAIIAKIREETRMRIRVDRAAPGCDERVIFITAVDKDEEASSERGVENDRGVAASTG
AGHDRDGDNSKEGNDDPEGNNSKEQNDDSEKGNGKEEEDGLEKDHSTEEKDDSEKDHIRE
EKDHSEKEHDKEEKDDPFVAKVAESEPERVIPSALKAISLVFDRIFAAGDNNETGNASAA
STPVSLRLLVLYSQAGWLLGKGGSVIKQMSADNGCEIRVLRDNLPSCALLNDKLCQITGE
IDSVRKGLNAVSELLLAHPPKETDAVSGVHSSGSSSRSLFNQSDGLPSGMQSNFHIPLQG
PSQANGPFDIIDLQPPIHGHASVPIESLSFRMLCPQDKVGSIIGKGGNIVKTIQKDTGCE
IKVLDTVPKSEDRIISISGPAHPSDGISPAQNAILHVQRKIMLPTSDKKEGPAICRLIVS
ANQVGCVLGKGGSIIAEMRKLSGAFIIVLSKDKIPRGVPEHDEVVQISGSCEAIQEALMQ
ITARLRNHLFRVDRMPAMGPNMRPPFGLLDSQFGPFAGNHESPSLFHKDFMGRPLDGISA
PWTVKGMRDLSDPLSISDIPGAGHREAGGFSGPGQPSMMPNLTAEVLVPRLIIPALCSED
GGCLDRIREFSEAKITVAEPIADAMDIPVLISGTPDQMHAARSLVQAFVMSESFAP

Transcript Sequence

Transcript ID

EES02175
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:415543:419828:-1 gene:SORBI_3003G004300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GTTTCACGCTTTTCAGGAGTAGAGACTGGTGCCGACGACTGGGCGGCCGCCACCGCCGCC
GCGCCGCCCCCCGCCCTACACCAGGTGCCGAGGCCTCCATCTTCGTGACCTTCGTCCGCG
GCGAGCACCCACCAGGTACGCCCACCCCTCTTGTCTTCGTTCCTTCTGTGCGAAACCGAG
CATCCAAACCCTAGCTTTGTCTCCCGTCGTTCCTGCCGTGCGAACCCAAACCCTAGCTAT
GTGTATTCGGATCGGATCGGATCTGATCCAGTTCCAAGTGTAGTATATATGTATGCCTAA
AAACTTGTTTCTGTTGCAAAAATATTGGGTGTGCATATGGACACCCATGCCCTTCCCTGG
GTCCGCCCTGGCCGTCGTACCTCATTTTACACACTAACATTGCTACTTGTTTGTCGACTA
GGAGAAGGCATGGCTTCACGCATGACGCCTTCCAAGAGGCCGTTTCAGAAAAATTCTTCA
GACTACAATGGCCGGGGCAAGTGGCAGAAGACAAAGCATTCTTCTCCACACAAGTCTCAG
TTCAAAATTGAGCCTGGTGTTCCCTTTTTTCGTATTCTCTGCCCAGCTTCAAAATCTGGT
AATGTAATTGGCAAAGGAGGTGCCATTATTGCAAAGATACGGGAAGAAACCAGGATGAGA
ATCAGGGTTGATAGAGCAGCCCCCGGCTGCGATGAGAGAGTTATTTTTATAACTGCTGTT
GACAAGGATGAAGAAGCTAGCAGCGAACGAGGCGTAGAGAATGACCGAGGTGTTGCTGCT
TCTACTGGTGCTGGCCATGATAGGGATGGAGATAACAGCAAGGAGGGAAATGATGATCCA
GAGGGAAACAACAGCAAGGAACAGAATGATGATTCGGAGAAAGGAAACGGTAAGGAAGAA
GAAGACGGTTTGGAGAAAGACCACAGTACTGAAGAAAAGGATGATTCAGAGAAAGACCAC
ATTAGGGAAGAGAAGGATCATTCAGAGAAAGAACATGATAAGGAAGAAAAGGATGATCCT
TTTGTTGCAAAAGTTGCAGAGTCAGAACCAGAGAGGGTAATACCATCGGCACTAAAGGCC
ATTTCGCTTGTCTTTGATAGGATTTTTGCAGCTGGAGATAATAATGAAACTGGGAATGCG
TCTGCTGCAAGCACTCCTGTTTCTTTGCGATTGTTGGTGCTGTACAGCCAAGCAGGTTGG
CTCTTGGGTAAGGGTGGTAGTGTGATTAAGCAAATGTCAGCTGATAACGGCTGTGAAATC
CGTGTTTTGAGAGACAACCTTCCATCATGTGCATTATTGAATGACAAACTTTGCCAGATC
ACTGGAGAGATTGACTCAGTAAGGAAAGGTCTCAATGCTGTATCTGAATTGCTCTTAGCT
CATCCACCCAAGGAAACTGATGCAGTTTCTGGTGTTCATTCTTCTGGATCATCATCACGT
TCTTTGTTCAACCAGTCTGATGGTCTTCCTTCAGGAATGCAATCTAACTTCCATATCCCT
TTGCAAGGACCATCCCAAGCCAATGGACCTTTTGATATCATTGATCTTCAACCTCCGATA
CATGGCCATGCCTCAGTGCCTATAGAATCCCTCTCCTTTAGGATGCTGTGTCCACAAGAC
AAGGTTGGCAGTATAATAGGCAAGGGTGGAAATATTGTTAAAACTATTCAAAAGGATACG
GGCTGTGAAATTAAAGTTCTTGACACTGTTCCAAAATCAGAAGATCGCATCATAAGTATA
TCTGGACCTGCGCATCCGAGTGATGGAATTTCCCCTGCACAGAATGCCATTCTGCATGTG
CAGCGTAAAATTATGTTACCTACCTCTGATAAGAAGGAAGGTCCTGCAATATGTAGGCTG
ATCGTTTCAGCAAACCAAGTTGGTTGTGTTCTCGGCAAAGGTGGTAGTATCATAGCTGAA
ATGAGGAAGCTGTCAGGAGCATTTATAATAGTGTTGAGCAAAGACAAGATTCCAAGGGGT
GTCCCAGAGCATGATGAAGTTGTTCAGATAAGCGGGAGTTGTGAAGCTATTCAAGAAGCT
CTAATGCAGATTACTGCTAGGCTTCGCAACCACCTTTTCCGGGTGGACAGAATGCCTGCA
ATGGGGCCTAATATGCGGCCACCTTTTGGTTTGTTAGATTCTCAGTTTGGTCCATTTGCG
GGAAACCATGAATCTCCATCCCTGTTTCATAAAGATTTTATGGGACGGCCATTGGATGGG
ATCTCTGCTCCTTGGACAGTGAAGGGCATGCGTGATCTCAGCGATCCATTGTCAATATCT
GATATACCTGGAGCAGGGCATAGAGAAGCTGGTGGATTTTCTGGTCCTGGTCAGCCATCT
ATGATGCCAAACTTGACTGCAGAGGTCTTAGTTCCAAGATTAATTATCCCTGCTCTCTGT
AGTGAGGATGGAGGTTGTTTGGATAGGATTCGTGAGTTTTCTGAAGCTAAGATAACTGTT
GCTGAACCTATAGCCGATGCAATGGACATTCCTGTTTTGATATCTGGCACACCAGACCAG
ATGCATGCAGCCCGAAGTCTTGTTCAAGCATTTGTCATGAGCGAATCATTTGCCCCATAA
TATGTCCAGAGGTGACGACACATCACTTTCTAATATTTTATTTGTTTATTTCTAGCATAA
TAATATATTTTTTTTATCTTCAGATTTCTGGTAATTGTGTAGGCAGTATGTGGCTTCATG
TTTGTGAATGTGTCCCTGTTTGAAGAGTGGCATATGCTCCAAGAGGCTAATTAGGCTGAA
TATAGAGACTAGAGTCCCAGTCTGTTGGGAGAATATTTATAGGTTGTTGCAAAATCTTCC
AAACTCATCACCTGATTTGAGATATGGAGCAACATTTTGAGTAGCAGCAGAAATGTGTTG
CTTATGCAAGCAGTACTGTTGGACCCGAAAAGGGCTTCTATCTAACATTTTTGTACTGAT
GTTGTGAGATATCACCATTATCTGTATTTCCAGCCGGGCTTATTATATCTGTATTTCAGC
AACACAGCAGTGCATAATAGTGGCAACGGAGGTTTTGTGCTGGTGCCGCGTCTATGGTAT
TCATACACATAATTTCAAACCTCTCGTCTCTATATTCAAACTTTGATTGTGATGATACTG
ATACAAGTAGCCGCCATATTTCTGTTTGCAAAAGGAAAAAAGAAAAAGGAAAAATGGAAA
GGGGGTCAAA