Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES02054
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:73048662:73053334:1 gene:SORBI_3003G427000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGACGCGGAGGGGTTGCTGGCGTCGGCTGCGATCAACCTGGGGCTGGCGCTGGTGGCG
CTTTCGCTCTTCTCCCTGCTCAAGAAGCAGCCGGGGAACGCGCCCGTTTACCGTCCCCGC
CGGATGGCGACCGGCGATCTTGGTGCTGGTGGTGGCTTGCTGCCGCTCGGCCACGGGCGA
CTAACGCCGTCGTTTCGGTGGATCTGCGCGGCCTTCCGGCTCTCCGAAGAAGACGTGCTG
CGGCGCCATGGCCTCGACGCGCTCGTCGTCGTCCGCCTCTTCAAGTTTGGGATCAAGTGT
TTCAGTGTTTGCTCGATTGTTGGATTACTGATCCTTGCTCCAACAAATTATACTAGTGAA
GGTCGAGCTGACATCAGAAGATCGAATTCCATGGAACTATTCACGGTTACCAATGTGACA
CGGGGATCTAACAGGCTTTGGGTGCATTTTTCATGCCTTTGTTTTATATCCTTTTATGTG
ATATATTTGCTTCATAAGGAATACAGAGAAATTACTATGAGAAGAATTGAGCACTTGAAG
CATCACTACAAAAGACATGATCAATACACCATTTTGGTTCGAGGAATTCCAACATGTCCA
GATCATGGAACTTATGGGTGCTATGTTGATCACTTCTTCTCAAAGCATTATCAGACATAC
CAATCATACCAAATTGTACACGACATAGGAAACATTGAGGCATTGCAGAAGTTGGCATCC
TCCATTCAGAAACGGATACAGAGGAAAAGAGAGACCAGAAAATGTAATCTTTTGGGACGG
ATTTGGAGCAAGTTTACATCAGAAGCAACAAATATTCACAACCATGAAAAAAAACTGAAA
AATCTGCAAGAGACTATCCGCCTCCTACAGTGTGAAAATTTGCTTAAACAAAAGGAGGTA
CCTGTAGCTTTTGTCTCATTCAAATCCCGGTTGGATGCTGCCCAAGCTGCGGAGATGCAA
CAGCTTGTCAATCCACTGTCATTGGTTACAACTTATGCCCCTGAACCAGCTGATATAATA
TGGAAAAATTTGTCCATTCCATTTTGGCGCATGGGTATGTACAAAATTGGAGTCTTCGTT
GCTGCGTTCCTGCTAACAGTGTTCTTCACCATCCCTGTAACAGCCGTGCAGGGGATAGTG
CAATTTGAGAAGATTAAAAGGTGGTTCCCACCAGCGAGAGCTGTGCAACTTATACCCGGT
TTGAATTCAGTTGTGACTGGGTATCTTCCGAGCATGATCTTAAATGGCTTTATTTACTTG
GTTCCTTTTGCGATGCTTGGTATGGCTTCATTTGAAGGCTGCATTGCCAACAGCCAAAAA
GAAATTAAGGCCTGCAATATGATCTTCTACTTCTTGCTTGGAAATGTTTTCTTCCTCAGT
ATTCTTTCAGGTTCTCTACTTGATCAGATAGGAGAATCCTTCGAGCACCCAAAGAACATC
CCTAACCGTCTTGCAAGTGCTGTTTCTGCACAGTCAGATTTCTTCATGACATACATTTTG
ACCAACGGCATGTCAGGGTTTTCTTTGGAGGTTCTTCAGCTTGGTTTGTTAATATGGCAA
TTTTTAAAGGCACATTCACTTGGACACAGTGAGGAACCATATCTTTATGGCTTCCCTTAC
TTCCGAGTCGTGCCCATTGTTTCCCTTGCAATATTGATTGGAGTGGTCTACGCTGTAGTT
GCACCCCTTCTACTCCCGATCCTTTTGATATATTTTCTGCTCGGTTATGCAGTGTACATC
AACCAGATGGAAGATGTTTATGAGATCACATACGATACATGCGGACAATACTGGCCCAAC
ATTCACCACTACATATTTCTATCAGTAACACTCATGCAAATCACAATGATAGGACTGTTT
GGGCTCAAGTCAAAGCCAGGAGCTTCCTTCGCGACAATTCCGTTGCTCGTGTTGAACATT
CTTTTCAATGAGTACTGCAAGGTCCGATTTCTTCCAAATTTCAGCCATCGACCAGTTCAG
GTTGCCAAACAGAGTGATGAGCTTGATGAGGCTGATGGTATGACTGAAGGCGATGTGAAC
GATGCAATTTGCGCTTATTGGCCACCATGGATGCGTCCGACAAGCCTGGAATCTAGTTCT
GTGCAGCCTTTGAATATTTGA

Peptide Sequence

PEP ID

EES02054
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:73048662:73053334:1 gene:SORBI_3003G427000 transcript:EES02054 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDAEGLLASAAINLGLALVALSLFSLLKKQPGNAPVYRPRRMATGDLGAGGGLLPLGHGR
LTPSFRWICAAFRLSEEDVLRRHGLDALVVVRLFKFGIKCFSVCSIVGLLILAPTNYTSE
GRADIRRSNSMELFTVTNVTRGSNRLWVHFSCLCFISFYVIYLLHKEYREITMRRIEHLK
HHYKRHDQYTILVRGIPTCPDHGTYGCYVDHFFSKHYQTYQSYQIVHDIGNIEALQKLAS
SIQKRIQRKRETRKCNLLGRIWSKFTSEATNIHNHEKKLKNLQETIRLLQCENLLKQKEV
PVAFVSFKSRLDAAQAAEMQQLVNPLSLVTTYAPEPADIIWKNLSIPFWRMGMYKIGVFV
AAFLLTVFFTIPVTAVQGIVQFEKIKRWFPPARAVQLIPGLNSVVTGYLPSMILNGFIYL
VPFAMLGMASFEGCIANSQKEIKACNMIFYFLLGNVFFLSILSGSLLDQIGESFEHPKNI
PNRLASAVSAQSDFFMTYILTNGMSGFSLEVLQLGLLIWQFLKAHSLGHSEEPYLYGFPY
FRVVPIVSLAILIGVVYAVVAPLLLPILLIYFLLGYAVYINQMEDVYEITYDTCGQYWPN
IHHYIFLSVTLMQITMIGLFGLKSKPGASFATIPLLVLNILFNEYCKVRFLPNFSHRPVQ
VAKQSDELDEADGMTEGDVNDAICAYWPPWMRPTSLESSSVQPLNI

Transcript Sequence

Transcript ID

EES02054
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:73048662:73053334:1 gene:SORBI_3003G427000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGTCTTGTGATGCTGGTGTTTGTCGCCTCGAGCTCGGCGTGTCGCCTTCCCCGCCTCATC
ACAAGATGAAACGGGCCGATCCGGGCCGGGTAGCCCAGAGCACAAGGGGAGGGCCCATTA
AAGCATACCCCGTGGGCCTTGACAGGTGGGCTAAGTTGTGGCAATACCCATGCGATTGCA
GGAATGGGGTTGCGGCGGCGCCAACCGAACGCGTCGTGCTCCGGCTATGCCACGTGTCGA
TCGAGGCTCCTCCGGCCACCACGTCGCCGCCCGCAATCGACCAACGCACCAACCAGACTC
CACCGGCGGGAGGCTGATCCTCCGCTGCTACTAGCGCAGTGCCCTCGCTCAGTCTGGTGC
CGTGCAGCGTAGGATCAGCTGTGCCTGTGAGCCTGTGAGGCTGTGAGAACGGAGAAGAAT
GGACGCGGAGGGGTTGCTGGCGTCGGCTGCGATCAACCTGGGGCTGGCGCTGGTGGCGCT
TTCGCTCTTCTCCCTGCTCAAGAAGCAGCCGGGGAACGCGCCCGTTTACCGTCCCCGCCG
GATGGCGACCGGCGATCTTGGTGCTGGTGGTGGCTTGCTGCCGCTCGGCCACGGGCGACT
AACGCCGTCGTTTCGGTGGATCTGCGCGGCCTTCCGGCTCTCCGAAGAAGACGTGCTGCG
GCGCCATGGCCTCGACGCGCTCGTCGTCGTCCGCCTCTTCAAGTTTGGGATCAAGTGTTT
CAGTGTTTGCTCGATTGTTGGATTACTGATCCTTGCTCCAACAAATTATACTAGTGAAGG
TCGAGCTGACATCAGAAGATCGAATTCCATGGAACTATTCACGGTTACCAATGTGACACG
GGGATCTAACAGGCTTTGGGTGCATTTTTCATGCCTTTGTTTTATATCCTTTTATGTGAT
ATATTTGCTTCATAAGGAATACAGAGAAATTACTATGAGAAGAATTGAGCACTTGAAGCA
TCACTACAAAAGACATGATCAATACACCATTTTGGTTCGAGGAATTCCAACATGTCCAGA
TCATGGAACTTATGGGTGCTATGTTGATCACTTCTTCTCAAAGCATTATCAGACATACCA
ATCATACCAAATTGTACACGACATAGGAAACATTGAGGCATTGCAGAAGTTGGCATCCTC
CATTCAGAAACGGATACAGAGGAAAAGAGAGACCAGAAAATGTAATCTTTTGGGACGGAT
TTGGAGCAAGTTTACATCAGAAGCAACAAATATTCACAACCATGAAAAAAAACTGAAAAA
TCTGCAAGAGACTATCCGCCTCCTACAGTGTGAAAATTTGCTTAAACAAAAGGAGGTACC
TGTAGCTTTTGTCTCATTCAAATCCCGGTTGGATGCTGCCCAAGCTGCGGAGATGCAACA
GCTTGTCAATCCACTGTCATTGGTTACAACTTATGCCCCTGAACCAGCTGATATAATATG
GAAAAATTTGTCCATTCCATTTTGGCGCATGGGTATGTACAAAATTGGAGTCTTCGTTGC
TGCGTTCCTGCTAACAGTGTTCTTCACCATCCCTGTAACAGCCGTGCAGGGGATAGTGCA
ATTTGAGAAGATTAAAAGGTGGTTCCCACCAGCGAGAGCTGTGCAACTTATACCCGGTTT
GAATTCAGTTGTGACTGGGTATCTTCCGAGCATGATCTTAAATGGCTTTATTTACTTGGT
TCCTTTTGCGATGCTTGGTATGGCTTCATTTGAAGGCTGCATTGCCAACAGCCAAAAAGA
AATTAAGGCCTGCAATATGATCTTCTACTTCTTGCTTGGAAATGTTTTCTTCCTCAGTAT
TCTTTCAGGTTCTCTACTTGATCAGATAGGAGAATCCTTCGAGCACCCAAAGAACATCCC
TAACCGTCTTGCAAGTGCTGTTTCTGCACAGTCAGATTTCTTCATGACATACATTTTGAC
CAACGGCATGTCAGGGTTTTCTTTGGAGGTTCTTCAGCTTGGTTTGTTAATATGGCAATT
TTTAAAGGCACATTCACTTGGACACAGTGAGGAACCATATCTTTATGGCTTCCCTTACTT
CCGAGTCGTGCCCATTGTTTCCCTTGCAATATTGATTGGAGTGGTCTACGCTGTAGTTGC
ACCCCTTCTACTCCCGATCCTTTTGATATATTTTCTGCTCGGTTATGCAGTGTACATCAA
CCAGATGGAAGATGTTTATGAGATCACATACGATACATGCGGACAATACTGGCCCAACAT
TCACCACTACATATTTCTATCAGTAACACTCATGCAAATCACAATGATAGGACTGTTTGG
GCTCAAGTCAAAGCCAGGAGCTTCCTTCGCGACAATTCCGTTGCTCGTGTTGAACATTCT
TTTCAATGAGTACTGCAAGGTCCGATTTCTTCCAAATTTCAGCCATCGACCAGTTCAGGT
TGCCAAACAGAGTGATGAGCTTGATGAGGCTGATGGTATGACTGAAGGCGATGTGAACGA
TGCAATTTGCGCTTATTGGCCACCATGGATGCGTCCGACAAGCCTGGAATCTAGTTCTGT
GCAGCCTTTGAATATTTGATCTGTTTTGCACAATGCACCAGCAATACTGGTGCTGATGTC
AGTTTTGTTGTTTAATGTAAACTATGATTATTTTTTTATAAAAAAAACGCACTGTATCAA
AAGAAAACACATGCAATTGATCTCAGTTTGACTGCTGCATGTGTCTCCTTTGTCCA