Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES02018
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:72153243:72159333:1 gene:SORBI_3003G415100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCGCCCCGCCGCAGCCGCACCCGCCGGCAGCGGTGGAGGGGGCAGCGCCGGCGGCT
CCCCTGACCGCCGCCGCGCCGGGTCCACGGCCGTACGACGTGGCGGTCGCGGCGGCGGAG
CTCCGGCCGGTGGACTGCAACCTCGCCTCGCTCTGTGACCACGTCCAGGCGGAGGGGTTC
GGCTCCGGGGCCTTCTCCGACCTCGTCGTGGAGGCCATGGGCGCCACCTACCGTCTCCAT
CGCCTCATCCTCTCCCGCAGCGCCTACTTCAGGAATATGCTACATGGTCCTTGGAGAGAG
GCGGGAGCACCCACAGTGGTTTTGCACATAGATGATGCCAATGTTGATTCAGAGGCAATT
GCAATTGCACTTGCATATCTTTACGGGCAACCCCCCAAGCTTAATGATAACAATGCATCC
CGGGTGCTTGCAGCTGCATCATTTCTGGATCTTCAGGACTTATGTACAATATGTACAGAT
TTTATTATTTCTGAGCTTTGGACATCAAACTTTTTACAATATCAGTTGTTTGCTGAGAGT
CAAGATTATGGTAGCCATGGAGAGCGTGTCAGGAATGCTTGCTGGGGTTATCTTTGTCAA
AGTGCCACGCTGGAATTACGAGAGGTGCTACCAAAGCTTTCTTCACAAACTTTGCATGCT
CTCCTTACATCTGACGAATTGTGGGTACCTAACGAGGAGAAAAGGTTTGAACTAGCATTG
TTTACTCTACTTGCAAAGGTTGCTATGTGTGAGATACAAGTTAGTGGGAATGAAACAAAC
TTACCAAGTGCTGATCGATCCTTGAGGAAGGGGAAGACTTCAATGGATGAATCTGGGGAG
CAACTGCTAATGGACTCTGAATTGCAGAACTTGAAGCTGCATAATAACTTGGGCAATGAA
ATTCCCCATAACATTATTGCTATTTCAGATATGAATGGTGAAGCTCCCAAGAGAATGGAG
AATGATTGTTCTACCGGAGGACCATCAGGAGAAAGCACTTCATATCAATTTAATGAAAAT
AACTGGCTTTCTAGTGAGCAAACTGCAAATAATTATTTCTCAAGAACTTCCAGTAGTGGT
GTTGTTCCTACTGAGTGGGGAAGGCCCAATGCACCACTTTGGGGTGGTAGGGTCGTTGGA
CGGCGGCAAGGTACATGCATTAGAGGAATCTCTTGTCTATCTACTGATGAATATAATGCC
TTTATGAATATATTTGAGAGGGGTTCTCTGCTCTACTGTAATATGTCCTTTGATGCACTG
CTAAGTGTTCGAAAGCAACTCGAAGAATTTGGATTCCCTTGCAAAGCTGTCAATGATGGT
CTATGGCTACAGATGCTTCTGTGTCACAGGGTGCAAGCGATAGTTGCTGATACTTGCAGG
AACTGTTGCCTTACGAATAATTCTTGTGCTTGCAAGCAAGCATATGTGAGCTCGCATACA
CACTACAGGCAGGAGCATGACCGGAGCAGTGCTTCTGGCAGCATAGGTAATGTCTACCTT
GCGGATGGCCAGGGCGATGGGAATGGTGTACTTGGGCCTGTCCGTGTTAACGTAAGAGGA
GCAGTCGATGGACTTGCTGGTATTGGGAGAGGGAACTCAAATGTGCCTGGTGCAGCTTGG
GCTCCTACACGTTATGTCTTCTCCCGTGTCCCTTATGGGCTCGGTTCAAGAAATGGCCAG
CAATTTGCCAATGATGAATCAGAACCTAGAATTGACCGCAATGGAGATATTTCAGCAGAT
GGTCTGACTGCATTGGTTAACCTTAGCCAAGAAAACAGTGCTGCTCATCTGCAGGCTGAA
AGTCTATTTGAGACAGGGATGCAGACAAGATATCGCAGTGTTGCATCTGTTTCCACTCCA
GGTGGTTCTTCTGTCCAGATGCAGGAGTCAAAGGAGCATGAACTTGGATCAGATTGGGAA
ACTGCAGAGGATGCAACTATATCGTTAGACATGAAAACACCTCTTAGCCATTTTCCTCCT
TTCCGCTTTGGGGTTGAATTCGAGGATGTGCACAGGCTTGCTGATGGTCAGGTGAAACAC
TCGACTGAAGTGTTTTATGCAGGCTCTCTATGGAAGGTTAGTGTCCAGGCATTCAATGAT
GAGGACCCTCATGGGCGACGCACCCTTGGACTTTTTCTCCACCGACGCAAGGCTGAGTTG
TTAGATCCCTTGAGGAAGGCTAACTTGTACATCGACCCCCGGGAAAAGGTCACTGCTCGG
TATCAGCTCATCTGTCCATCAAAGAGAGAGGTCATGATATTTGGAAGCCTGAAGCAGGCT
GGGACGCTGCTACCAAAAGCCCCGAAGGGCTGGGGTTGGCGTACTGCTATACTGTTTGAT
GAGCTTGCAGATCTTCTCCAGGGTGGTGCCCTGCGAATTGCTGCAGTGGTCCAGCTCGTG
TAA

Peptide Sequence

PEP ID

EES02018
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:72153243:72159333:1 gene:SORBI_3003G415100 transcript:EES02018 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAPPQPHPPAAVEGAAPAAPLTAAAPGPRPYDVAVAAAELRPVDCNLASLCDHVQAEGF
GSGAFSDLVVEAMGATYRLHRLILSRSAYFRNMLHGPWREAGAPTVVLHIDDANVDSEAI
AIALAYLYGQPPKLNDNNASRVLAAASFLDLQDLCTICTDFIISELWTSNFLQYQLFAES
QDYGSHGERVRNACWGYLCQSATLELREVLPKLSSQTLHALLTSDELWVPNEEKRFELAL
FTLLAKVAMCEIQVSGNETNLPSADRSLRKGKTSMDESGEQLLMDSELQNLKLHNNLGNE
IPHNIIAISDMNGEAPKRMENDCSTGGPSGESTSYQFNENNWLSSEQTANNYFSRTSSSG
VVPTEWGRPNAPLWGGRVVGRRQGTCIRGISCLSTDEYNAFMNIFERGSLLYCNMSFDAL
LSVRKQLEEFGFPCKAVNDGLWLQMLLCHRVQAIVADTCRNCCLTNNSCACKQAYVSSHT
HYRQEHDRSSASGSIGNVYLADGQGDGNGVLGPVRVNVRGAVDGLAGIGRGNSNVPGAAW
APTRYVFSRVPYGLGSRNGQQFANDESEPRIDRNGDISADGLTALVNLSQENSAAHLQAE
SLFETGMQTRYRSVASVSTPGGSSVQMQESKEHELGSDWETAEDATISLDMKTPLSHFPP
FRFGVEFEDVHRLADGQVKHSTEVFYAGSLWKVSVQAFNDEDPHGRRTLGLFLHRRKAEL
LDPLRKANLYIDPREKVTARYQLICPSKREVMIFGSLKQAGTLLPKAPKGWGWRTAILFD
ELADLLQGGALRIAAVVQLV

Transcript Sequence

Transcript ID

EES02018
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:72153243:72159333:1 gene:SORBI_3003G415100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GACGCCTAAAACCATGAGCGCAGTACATTTCCCGAAGCCGAGCGATCGCTTTTCGCCTTT
CTTCTACCTCCCGACTCGCTGGCCTCTCTCCCGACCCTGCCCCGCCTCATCACTCCCCAT
TCCACCGACACGCGCTGTGTCGCGCGCCTCCGCTAAAACCCTAGCCCCACCCAGGCCCGA
TGGCCGCCCCGCCGCAGCCGCACCCGCCGGCAGCGGTGGAGGGGGCAGCGCCGGCGGCTC
CCCTGACCGCCGCCGCGCCGGGTCCACGGCCGTACGACGTGGCGGTCGCGGCGGCGGAGC
TCCGGCCGGTGGACTGCAACCTCGCCTCGCTCTGTGACCACGTCCAGGCGGAGGGGTTCG
GCTCCGGGGCCTTCTCCGACCTCGTCGTGGAGGCCATGGGCGCCACCTACCGTCTCCATC
GCCTCATCCTCTCCCGCAGCGCCTACTTCAGGAATATGCTACATGGTCCTTGGAGAGAGG
CGGGAGCACCCACAGTGGTTTTGCACATAGATGATGCCAATGTTGATTCAGAGGCAATTG
CAATTGCACTTGCATATCTTTACGGGCAACCCCCCAAGCTTAATGATAACAATGCATCCC
GGGTGCTTGCAGCTGCATCATTTCTGGATCTTCAGGACTTATGTACAATATGTACAGATT
TTATTATTTCTGAGCTTTGGACATCAAACTTTTTACAATATCAGTTGTTTGCTGAGAGTC
AAGATTATGGTAGCCATGGAGAGCGTGTCAGGAATGCTTGCTGGGGTTATCTTTGTCAAA
GTGCCACGCTGGAATTACGAGAGGTGCTACCAAAGCTTTCTTCACAAACTTTGCATGCTC
TCCTTACATCTGACGAATTGTGGGTACCTAACGAGGAGAAAAGGTTTGAACTAGCATTGT
TTACTCTACTTGCAAAGGTTGCTATGTGTGAGATACAAGTTAGTGGGAATGAAACAAACT
TACCAAGTGCTGATCGATCCTTGAGGAAGGGGAAGACTTCAATGGATGAATCTGGGGAGC
AACTGCTAATGGACTCTGAATTGCAGAACTTGAAGCTGCATAATAACTTGGGCAATGAAA
TTCCCCATAACATTATTGCTATTTCAGATATGAATGGTGAAGCTCCCAAGAGAATGGAGA
ATGATTGTTCTACCGGAGGACCATCAGGAGAAAGCACTTCATATCAATTTAATGAAAATA
ACTGGCTTTCTAGTGAGCAAACTGCAAATAATTATTTCTCAAGAACTTCCAGTAGTGGTG
TTGTTCCTACTGAGTGGGGAAGGCCCAATGCACCACTTTGGGGTGGTAGGGTCGTTGGAC
GGCGGCAAGGTACATGCATTAGAGGAATCTCTTGTCTATCTACTGATGAATATAATGCCT
TTATGAATATATTTGAGAGGGGTTCTCTGCTCTACTGTAATATGTCCTTTGATGCACTGC
TAAGTGTTCGAAAGCAACTCGAAGAATTTGGATTCCCTTGCAAAGCTGTCAATGATGGTC
TATGGCTACAGATGCTTCTGTGTCACAGGGTGCAAGCGATAGTTGCTGATACTTGCAGGA
ACTGTTGCCTTACGAATAATTCTTGTGCTTGCAAGCAAGCATATGTGAGCTCGCATACAC
ACTACAGGCAGGAGCATGACCGGAGCAGTGCTTCTGGCAGCATAGGTAATGTCTACCTTG
CGGATGGCCAGGGCGATGGGAATGGTGTACTTGGGCCTGTCCGTGTTAACGTAAGAGGAG
CAGTCGATGGACTTGCTGGTATTGGGAGAGGGAACTCAAATGTGCCTGGTGCAGCTTGGG
CTCCTACACGTTATGTCTTCTCCCGTGTCCCTTATGGGCTCGGTTCAAGAAATGGCCAGC
AATTTGCCAATGATGAATCAGAACCTAGAATTGACCGCAATGGAGATATTTCAGCAGATG
GTCTGACTGCATTGGTTAACCTTAGCCAAGAAAACAGTGCTGCTCATCTGCAGGCTGAAA
GTCTATTTGAGACAGGGATGCAGACAAGATATCGCAGTGTTGCATCTGTTTCCACTCCAG
GTGGTTCTTCTGTCCAGATGCAGGAGTCAAAGGAGCATGAACTTGGATCAGATTGGGAAA
CTGCAGAGGATGCAACTATATCGTTAGACATGAAAACACCTCTTAGCCATTTTCCTCCTT
TCCGCTTTGGGGTTGAATTCGAGGATGTGCACAGGCTTGCTGATGGTCAGGTGAAACACT
CGACTGAAGTGTTTTATGCAGGCTCTCTATGGAAGGTTAGTGTCCAGGCATTCAATGATG
AGGACCCTCATGGGCGACGCACCCTTGGACTTTTTCTCCACCGACGCAAGGCTGAGTTGT
TAGATCCCTTGAGGAAGGCTAACTTGTACATCGACCCCCGGGAAAAGGTCACTGCTCGGT
ATCAGCTCATCTGTCCATCAAAGAGAGAGGTCATGATATTTGGAAGCCTGAAGCAGGCTG
GGACGCTGCTACCAAAAGCCCCGAAGGGCTGGGGTTGGCGTACTGCTATACTGTTTGATG
AGCTTGCAGATCTTCTCCAGGGTGGTGCCCTGCGAATTGCTGCAGTGGTCCAGCTCGTGT
AAACTACAGTTGCAGAAAACAACTGCTTTGCAAGGATGGTGATACCACAGCAGTTTATGT
AGTTGATAGTTTGATACCTGCAAGAACTCAGTCCGTCATGTATTCGTGCTCTGAAATTGT
GTATACTGTATAGTGGTTCGCTGTTTGATATACTATAAAATAATATATAGGTGGATCTTC
AGCTCTGGATTTGGGCCCATGTGGA