Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES01985
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:71482355:71489364:1 gene:SORBI_3003G407200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAGCAGCAGCCGCAGCAGCAAGGCTTGGACATAGACAAGCTACAACAGGTTGTGAAG
ACCCGCTGGCTAAAGCCTCAAGAAGTTCTGAAGATACTGCAGAATCATGAGTTGTTCACG
ATCTCACATAAGACCCCTCAGAAGCCACAGAGTGGTTCTTGGTTTCTTTTCAATCGTAGA
GTACTCCGGTACTTCCGAAGTGATGGATTTGAATGGCAAAAGAAGAAGAATGGGAAGACC
ATTAATGAAGCTCATGAGCGCCTTAAGGTCGATAATGTGGATGCACTGAATTGCTACTAT
GCTCGTGGAGACAAAAATCCTACATTTCAGAGGCGGATATATTGGATGCTGGATCCGGCT
TATGAACACATTGTCCTTGTCCACTATAGGGATGTTCTAGAGGGCAGCATTTCAGTGTCT
GCACGAAATGATTCTTCAACATCGAATCAGAATGGCAGTGCTAGCAGAGCTGAAGTACAT
AGTTCACCTGGTTGGACAAGTGAGTTAATTGTACAATGTCCCAATTCGTGCAGTCCGGGA
TCTGCGGAAGAAGTTAGTTCCCGTACTAGTGCAAGTGAATCTGATTGGATTCAACATAAG
GCAGCCTTGCGGAAGCTTAAAATGCAGCTGAGTCTGGAAGACAAAGAAGATTGTGATGTT
AATGCCGAGGAAGTTCCAGCAAATAATGCGCCTATTATTTTGCCTGGGATTCAGAATGAG
GAGCTAGACACTTCTAGGAATCATGATGATATCTTTGATGTGCTGGACTTTAATGAAGAT
CGTATCAACGGAACTGGAACCCACTCATGTCCCAGTGCTATTGATGTGCTAAAAAATTCA
GACACATGGTTAGAGGAGGATCAGCTTGAGGCAATTCTGCATCCAGCATGTATGACATTG
ACTGAAAATCAATGGTTCAAGATTCATGAGATTTCTCCAGAATCAGCGTTTTCTTCTGAA
AGTACAAAGGTTATCATTGTAGGAGACTTCCTTTGCAATCCCCCTCACAGTTCATGGGAA
CTGCTGTTTGGTGATGTTAAGGTACCTGTGGAAATTATCCAGCAAGGTGTCATCCGATGC
CATACTCCATGCCTTAATGCTGGAAAAGTGAGAATGTGCTTGGTCGATGGGAATGGGAAG
TCCTGTAGTGAAGCACGAGAATTTGAATTCCTTGAAAAGCCTACCAAAGGCATGATTGAT
GGAAACAGGAACCCCTGCAATGAAGCACGAGATTCCAAAATCCATCAGATACCTACGAAA
AGTAGTGATGAGCTGTCGCTGTTACTACATTATGTTCAGATGCTTTTTGATGGTCATGCT
TGTGGGCTATTTTCAAATTTTAGCTTGCCACTCCCAAATCTCGGCTGTGAATTCCAAATC
AACCAAATGGATATCATAAAGAAGACATATGAGCAGCTGGACCCTGAGAATACAGTAAAT
AGTGTCATGGAAGCATTGCTTAATGACAAGTTTAAGCAATGGCTGTCATCTAAATGTGAA
CAGAATATTGACGGAGATCATTTTCTTCCTAAGCAATACCACAGTATTATACATATGATT
GCAGCCTTGGGATATGTCTTGGCTTTGAAGCCACTGCTTAGTTCTGGAGTGCCTATAAAC
TACCGTGATGCAAATGGATGGACTGCTCTACATTGGGCTGCAAGGTTTGGCAGAGAAGAT
ATGGTCGTGGCTCTTCTTGCTGCTGGTGCTGCAGCTGGTGCACTTTCACATCCGACATCA
GAGGATCCTGCTGCCAAAACACCTGCTTCAATAGCTTTGGCATATGGTTTCAAGGGCCTA
TCCGCATTCCTTTCAGAAGCACAATTAACAACTCATCTTGATTCTATTGAATCAAAAGAA
AATGGAAAACCTGATTCTAGGGAAGGGGGGATATGTCGTGCTGTGGACAGAATATCAGAC
AAAAGCAGCCACGTGCATGGTGGAACTGATGATCAGCTTGCACTTAAGGATTCCCTAGGA
GCTGTCCGGAATGCAGTTCAGGCTGCAGGACGCATACAAGCTGCATTCCGAATTTTTTCC
TTTAAGAAAAAGAAAGAGATGGCTCTTCAGAACAGAAATAGCTGCTTCTTGTCCATTAGT
GAGACAGAAGCAGTTTCACTTTCACATGGTATGCTGGAGAAAGCTGCATTATCTATCCAG
AAGAATTTCAGGTGCTGGAAAAAACGTAAAGAATTCCTGAGGATACGTAATAATGTTGTC
AGGATACAGGCCCGAGTGAGAGCTCATCAAGAAAGAAAGAAGTACAAGGAATTACTTTCA
AGTGTTGGAGTCCTTGAGAAGGTGATGATACGGTGGTACCGTAAAGGTGTTGGTTTGCGT
GGATTCAATTCTGAGGCGATGCCTATTGATGAAGTGGACGAAGATGTTGCCAAGGTTTTC
CGGAAGCTCAGAGTGGAAACAGCCATTGATGAAGCTGTTTCAAGGGTATCATGTATCCTT
GGTAGCCCTAAAGCAATGCAGCAGTACCGTAGGATGCTCAAGAGGTACCAACAAGCAAAG
GATGATCATGAAAAGTAA

Peptide Sequence

PEP ID

EES01985
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:71482355:71489364:1 gene:SORBI_3003G407200 transcript:EES01985 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MQQQPQQQGLDIDKLQQVVKTRWLKPQEVLKILQNHELFTISHKTPQKPQSGSWFLFNRR
VLRYFRSDGFEWQKKKNGKTINEAHERLKVDNVDALNCYYARGDKNPTFQRRIYWMLDPA
YEHIVLVHYRDVLEGSISVSARNDSSTSNQNGSASRAEVHSSPGWTSELIVQCPNSCSPG
SAEEVSSRTSASESDWIQHKAALRKLKMQLSLEDKEDCDVNAEEVPANNAPIILPGIQNE
ELDTSRNHDDIFDVLDFNEDRINGTGTHSCPSAIDVLKNSDTWLEEDQLEAILHPACMTL
TENQWFKIHEISPESAFSSESTKVIIVGDFLCNPPHSSWELLFGDVKVPVEIIQQGVIRC
HTPCLNAGKVRMCLVDGNGKSCSEAREFEFLEKPTKGMIDGNRNPCNEARDSKIHQIPTK
SSDELSLLLHYVQMLFDGHACGLFSNFSLPLPNLGCEFQINQMDIIKKTYEQLDPENTVN
SVMEALLNDKFKQWLSSKCEQNIDGDHFLPKQYHSIIHMIAALGYVLALKPLLSSGVPIN
YRDANGWTALHWAARFGREDMVVALLAAGAAAGALSHPTSEDPAAKTPASIALAYGFKGL
SAFLSEAQLTTHLDSIESKENGKPDSREGGICRAVDRISDKSSHVHGGTDDQLALKDSLG
AVRNAVQAAGRIQAAFRIFSFKKKKEMALQNRNSCFLSISETEAVSLSHGMLEKAALSIQ
KNFRCWKKRKEFLRIRNNVVRIQARVRAHQERKKYKELLSSVGVLEKVMIRWYRKGVGLR
GFNSEAMPIDEVDEDVAKVFRKLRVETAIDEAVSRVSCILGSPKAMQQYRRMLKRYQQAK
DDHEK

Transcript Sequence

Transcript ID

EES01985
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:71482355:71489364:1 gene:SORBI_3003G407200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGAATCTGTCGCCGTGTCGCACGCTTTCCCCTTTTCCTCCTCCGCCTGCTCTCACGTGTT
CATCGTTTCTTCTCGCCCCATTCCATCCATCGTTCCACTCCCATCCCTCTCCCCAGGCCA
TCACTCAGCGCGTTGCTGTCGCCTGGGAACAATAGAGTTTGCGAGGAGAGGGGACCAATC
CACAGGGTTTAAATCGGCCTCGGCCCCGCCTCGAGTTCTTGCTGGATTCGCTCGGAGCGG
GGGCGCGGGCTTGTCGGCACAGCGCGATGCAGCAGCAGCCGCAGCAGCAAGGCTTGGACA
TAGACAAGCTACAACAGGTTGTGAAGACCCGCTGGCTAAAGCCTCAAGAAGTTCTGAAGA
TACTGCAGAATCATGAGTTGTTCACGATCTCACATAAGACCCCTCAGAAGCCACAGAGTG
GTTCTTGGTTTCTTTTCAATCGTAGAGTACTCCGGTACTTCCGAAGTGATGGATTTGAAT
GGCAAAAGAAGAAGAATGGGAAGACCATTAATGAAGCTCATGAGCGCCTTAAGGTCGATA
ATGTGGATGCACTGAATTGCTACTATGCTCGTGGAGACAAAAATCCTACATTTCAGAGGC
GGATATATTGGATGCTGGATCCGGCTTATGAACACATTGTCCTTGTCCACTATAGGGATG
TTCTAGAGGGCAGCATTTCAGTGTCTGCACGAAATGATTCTTCAACATCGAATCAGAATG
GCAGTGCTAGCAGAGCTGAAGTACATAGTTCACCTGGTTGGACAAGTGAGTTAATTGTAC
AATGTCCCAATTCGTGCAGTCCGGGATCTGCGGAAGAAGTTAGTTCCCGTACTAGTGCAA
GTGAATCTGATTGGATTCAACATAAGGCAGCCTTGCGGAAGCTTAAAATGCAGCTGAGTC
TGGAAGACAAAGAAGATTGTGATGTTAATGCCGAGGAAGTTCCAGCAAATAATGCGCCTA
TTATTTTGCCTGGGATTCAGAATGAGGAGCTAGACACTTCTAGGAATCATGATGATATCT
TTGATGTGCTGGACTTTAATGAAGATCGTATCAACGGAACTGGAACCCACTCATGTCCCA
GTGCTATTGATGTGCTAAAAAATTCAGACACATGGTTAGAGGAGGATCAGCTTGAGGCAA
TTCTGCATCCAGCATGTATGACATTGACTGAAAATCAATGGTTCAAGATTCATGAGATTT
CTCCAGAATCAGCGTTTTCTTCTGAAAGTACAAAGGTTATCATTGTAGGAGACTTCCTTT
GCAATCCCCCTCACAGTTCATGGGAACTGCTGTTTGGTGATGTTAAGGTACCTGTGGAAA
TTATCCAGCAAGGTGTCATCCGATGCCATACTCCATGCCTTAATGCTGGAAAAGTGAGAA
TGTGCTTGGTCGATGGGAATGGGAAGTCCTGTAGTGAAGCACGAGAATTTGAATTCCTTG
AAAAGCCTACCAAAGGCATGATTGATGGAAACAGGAACCCCTGCAATGAAGCACGAGATT
CCAAAATCCATCAGATACCTACGAAAAGTAGTGATGAGCTGTCGCTGTTACTACATTATG
TTCAGATGCTTTTTGATGGTCATGCTTGTGGGCTATTTTCAAATTTTAGCTTGCCACTCC
CAAATCTCGGCTGTGAATTCCAAATCAACCAAATGGATATCATAAAGAAGACATATGAGC
AGCTGGACCCTGAGAATACAGTAAATAGTGTCATGGAAGCATTGCTTAATGACAAGTTTA
AGCAATGGCTGTCATCTAAATGTGAACAGAATATTGACGGAGATCATTTTCTTCCTAAGC
AATACCACAGTATTATACATATGATTGCAGCCTTGGGATATGTCTTGGCTTTGAAGCCAC
TGCTTAGTTCTGGAGTGCCTATAAACTACCGTGATGCAAATGGATGGACTGCTCTACATT
GGGCTGCAAGGTTTGGCAGAGAAGATATGGTCGTGGCTCTTCTTGCTGCTGGTGCTGCAG
CTGGTGCACTTTCACATCCGACATCAGAGGATCCTGCTGCCAAAACACCTGCTTCAATAG
CTTTGGCATATGGTTTCAAGGGCCTATCCGCATTCCTTTCAGAAGCACAATTAACAACTC
ATCTTGATTCTATTGAATCAAAAGAAAATGGAAAACCTGATTCTAGGGAAGGGGGGATAT
GTCGTGCTGTGGACAGAATATCAGACAAAAGCAGCCACGTGCATGGTGGAACTGATGATC
AGCTTGCACTTAAGGATTCCCTAGGAGCTGTCCGGAATGCAGTTCAGGCTGCAGGACGCA
TACAAGCTGCATTCCGAATTTTTTCCTTTAAGAAAAAGAAAGAGATGGCTCTTCAGAACA
GAAATAGCTGCTTCTTGTCCATTAGTGAGACAGAAGCAGTTTCACTTTCACATGGTATGC
TGGAGAAAGCTGCATTATCTATCCAGAAGAATTTCAGGTGCTGGAAAAAACGTAAAGAAT
TCCTGAGGATACGTAATAATGTTGTCAGGATACAGGCCCGAGTGAGAGCTCATCAAGAAA
GAAAGAAGTACAAGGAATTACTTTCAAGTGTTGGAGTCCTTGAGAAGGTGATGATACGGT
GGTACCGTAAAGGTGTTGGTTTGCGTGGATTCAATTCTGAGGCGATGCCTATTGATGAAG
TGGACGAAGATGTTGCCAAGGTTTTCCGGAAGCTCAGAGTGGAAACAGCCATTGATGAAG
CTGTTTCAAGGGTATCATGTATCCTTGGTAGCCCTAAAGCAATGCAGCAGTACCGTAGGA
TGCTCAAGAGGTACCAACAAGCAAAGGATGATCATGAAAAGTAATGCATGTGTTAAGCCA
ACAGTGATGGACAGTGAATCCCGAGAAAACTGAAAAATTCTTGGGTGATCTAGTACCAGC
TCCAATTCATGCTGGACGCTGTTTGAGTGTACATAGCAACGTCATGTGCAATAGCTGACT
TTTGGCTGAAAGTTGATAAAGATGATGACTTAGTACATGCAGAAGCTTCCAAGATCCCGA
GCAAGGTAGATGAGGTCTGAGCAACACTGTATCCGATATATATGCCTTATGCACTGCCTT
CAGTCAGTAGGTTTGTAGTAAATTTGTACTATATGGTAGTAAATAGGGGCAAACTATTGT
AATTTGTAGCACGGTGAATGTTGTAAGGAATCTCTCAGTTGCCATTTTTGGCCTTGTTTA
GTTCCAAAATTTTTTGCAAAACATGTACTGTAGCACTTTCGTTTGCATTTGACAAATATT
ATCCGATCATGCA