Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES01944
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:70807984:70812549:1 gene:SORBI_3003G398700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGGCGACGGAGAGGGAGCCGAGAGCTCCGCCGTCGGCGAGCGGCAGGGCGTGCCC
TTCGCTCTGGGCGGCCCGGTGTTCGTCCCCTTCATGGTGGGCCCCATCTCCACCGTACCA
GAGTTCATGTCCTCCGCCCTCCAGGAGCTCCAGGCCTTGGAGGACGAATTGGGAGACCCT
GGCGACGAATTTGACGATGAGCTTTGTGTCGATGAGCTCAAGGTGCTCTCTGAGGAGGAG
CTGGTGGAGCGCGCCCTCCAGGAGGCTATGGAGGACTCGGATTCTGGCACTCAGCCACAA
TTAGAGGATCAAACACTTGATGGAGGAATGTTAGTGAATCCAACACCTACAAATGAGGCC
CTCACACTAAGCCCATCGGCTGAAAGAGAGAGCTCTGGATTGCCTGTTGAAGATGTGGCA
GCCATATTAAATGAACCACAAAGCAGCAATAGCAAGCCCAGAGGCAAAAAGGCAAAAGCC
AGATGCAGAAAGGGGAAAACTGGAACCATCACGCTAGATTCTCCGGTTGAAGGAGAGAAC
CATGGATCAGCTATTGACATGTCAATTGTACCATTTGAACCAGAAGGTAGTGAGGGAAAT
GGAACGATGCCTTCAAATCCACCAGCTGAAAATGGTGCCTCTGAATCACCTGTTGATGGT
ATGTCAATTGTTCCACATGATTCAGAGGGAACTAATGGGCAAACAACATGTAGGAAGGGC
AAAAAGAGAGGCAGACATTTTGATAGAGAGGTTCGAGCAGAGATTTTACAAGGAAGCTAT
CTTACTAAAGTAGAGAAGTGGGTACAAATCAAGGCCAAGCAAGACGAAGACAAATTTGCA
GCAAGGCTGCATTCTTTCAGTGGCAATTCTGTGAAGCCCAAAGGTTCCAAGTCATCATCT
GAGAAAATTGAAACGGCGAGATCTCTTAAACTAATTGGTGCACCTTGGAAGAACAAAGCT
TTAAGATCTGACGAGCACAGACCTGTGGTCCATCCAGAAGTAATTCTTTGTGTTGAAGTT
TATCAGAAGACATATGCCTCCGTTAAGTCCCAGGAACTTCTTGTGCTGGGAAGCCAATTC
CTTACTGATCTGAGGGACAACATTTGTTGTTTGACTGATAAGCTGATGAAGGTGGCTGGG
CAACACGATCATTCTGGGTATTTCCTTATCGAGGACACGTTCTACAATGATACAAGACAT
TATTCTGCTACTGATTACAGTAAGCCTATACTAGATTGGCTTGAGAATTCCAGTGATGAG
GTAGCAGAGAAGTGGGATGCCATAACATCTGGTGTTTTGAAGAAACGGCAAAAGGACTTG
CTGAGCGGTTTGAGTATTTCTAACGTGCCTGAACTTAAATCTGAAACAATGCAAATGACT
CGTTTCTCTGACCTGCATTTCCGGCCTGGTGCTGGGTACCTCTACTGCCATCAGGGGAAC
TGCAAGCACACGATCGTGATAAGGGACATGAGGTTGATCCACCCAGATGACACACACAAC
CAAGCTGAATACCCTATCCAGACATTCCAGTTGCAGAAGCGCTTGCAGAAGTGCTCGGTC
TGCCAGATCTATCTCGCGACGAAGGTGACGGTCGACGATAAGTGGGCTCTGAATAACCCC
TGCTACTTCTGCATCAAATGCTACTACCTCCTTCATTACAAGGAGGACAGCACACTGCTG
TATCCTCACACTGTATATGATTTCATCCAAGAGTAA

Peptide Sequence

PEP ID

EES01944
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:70807984:70812549:1 gene:SORBI_3003G398700 transcript:EES01944 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAGDGEGAESSAVGERQGVPFALGGPVFVPFMVGPISTVPEFMSSALQELQALEDELGDP
GDEFDDELCVDELKVLSEEELVERALQEAMEDSDSGTQPQLEDQTLDGGMLVNPTPTNEA
LTLSPSAERESSGLPVEDVAAILNEPQSSNSKPRGKKAKARCRKGKTGTITLDSPVEGEN
HGSAIDMSIVPFEPEGSEGNGTMPSNPPAENGASESPVDGMSIVPHDSEGTNGQTTCRKG
KKRGRHFDREVRAEILQGSYLTKVEKWVQIKAKQDEDKFAARLHSFSGNSVKPKGSKSSS
EKIETARSLKLIGAPWKNKALRSDEHRPVVHPEVILCVEVYQKTYASVKSQELLVLGSQF
LTDLRDNICCLTDKLMKVAGQHDHSGYFLIEDTFYNDTRHYSATDYSKPILDWLENSSDE
VAEKWDAITSGVLKKRQKDLLSGLSISNVPELKSETMQMTRFSDLHFRPGAGYLYCHQGN
CKHTIVIRDMRLIHPDDTHNQAEYPIQTFQLQKRLQKCSVCQIYLATKVTVDDKWALNNP
CYFCIKCYYLLHYKEDSTLLYPHTVYDFIQE

Transcript Sequence

Transcript ID

EES01944
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:70807984:70812549:1 gene:SORBI_3003G398700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCACTGGTGGAGACCGCCGATCACGACGATTTCGCGCGGGCGGCGACGGTGGCGGCGGCC
CAATCGGCGTGGCGGCGTGTGGGCGCTGGGCAGGACGAGGAGGGAGGCAGTTGAGGACCG
CCAGGGCGTACGTCGGTGCTCCACCACAAGCGTGTCGATCCGGGGGAGACGACGCGCGAC
GCGCGCGCGGCGAGGGCACGGCGAGGCCAGAGCGCGGCGCCTGCATCCCCGCAGGTCCTG
TCTTCTAGTTCTAGGTGGGCGGCACTTGTCGAGTCGTCATCAGTGTACATCATCGAGAAG
AGAAGCGCCGTCGTGGTGATGGCGGGCGACGGAGAGGGAGCCGAGAGCTCCGCCGTCGGC
GAGCGGCAGGGCGTGCCCTTCGCTCTGGGCGGCCCGGTGTTCGTCCCCTTCATGGTGGGC
CCCATCTCCACCGTACCAGAGTTCATGTCCTCCGCCCTCCAGGAGCTCCAGGCCTTGGAG
GACGAATTGGGAGACCCTGGCGACGAATTTGACGATGAGCTTTGTGTCGATGAGCTCAAG
GTGCTCTCTGAGGAGGAGCTGGTGGAGCGCGCCCTCCAGGAGGCTATGGAGGACTCGGAT
TCTGGCACTCAGCCACAATTAGAGGATCAAACACTTGATGGAGGAATGTTAGTGAATCCA
ACACCTACAAATGAGGCCCTCACACTAAGCCCATCGGCTGAAAGAGAGAGCTCTGGATTG
CCTGTTGAAGATGTGGCAGCCATATTAAATGAACCACAAAGCAGCAATAGCAAGCCCAGA
GGCAAAAAGGCAAAAGCCAGATGCAGAAAGGGGAAAACTGGAACCATCACGCTAGATTCT
CCGGTTGAAGGAGAGAACCATGGATCAGCTATTGACATGTCAATTGTACCATTTGAACCA
GAAGGTAGTGAGGGAAATGGAACGATGCCTTCAAATCCACCAGCTGAAAATGGTGCCTCT
GAATCACCTGTTGATGGTATGTCAATTGTTCCACATGATTCAGAGGGAACTAATGGGCAA
ACAACATGTAGGAAGGGCAAAAAGAGAGGCAGACATTTTGATAGAGAGGTTCGAGCAGAG
ATTTTACAAGGAAGCTATCTTACTAAAGTAGAGAAGTGGGTACAAATCAAGGCCAAGCAA
GACGAAGACAAATTTGCAGCAAGGCTGCATTCTTTCAGTGGCAATTCTGTGAAGCCCAAA
GGTTCCAAGTCATCATCTGAGAAAATTGAAACGGCGAGATCTCTTAAACTAATTGGTGCA
CCTTGGAAGAACAAAGCTTTAAGATCTGACGAGCACAGACCTGTGGTCCATCCAGAAGTA
ATTCTTTGTGTTGAAGTTTATCAGAAGACATATGCCTCCGTTAAGTCCCAGGAACTTCTT
GTGCTGGGAAGCCAATTCCTTACTGATCTGAGGGACAACATTTGTTGTTTGACTGATAAG
CTGATGAAGGTGGCTGGGCAACACGATCATTCTGGGTATTTCCTTATCGAGGACACGTTC
TACAATGATACAAGACATTATTCTGCTACTGATTACAGTAAGCCTATACTAGATTGGCTT
GAGAATTCCAGTGATGAGGTAGCAGAGAAGTGGGATGCCATAACATCTGGTGTTTTGAAG
AAACGGCAAAAGGACTTGCTGAGCGGTTTGAGTATTTCTAACGTGCCTGAACTTAAATCT
GAAACAATGCAAATGACTCGTTTCTCTGACCTGCATTTCCGGCCTGGTGCTGGGTACCTC
TACTGCCATCAGGGGAACTGCAAGCACACGATCGTGATAAGGGACATGAGGTTGATCCAC
CCAGATGACACACACAACCAAGCTGAATACCCTATCCAGACATTCCAGTTGCAGAAGCGC
TTGCAGAAGTGCTCGGTCTGCCAGATCTATCTCGCGACGAAGGTGACGGTCGACGATAAG
TGGGCTCTGAATAACCCCTGCTACTTCTGCATCAAATGCTACTACCTCCTTCATTACAAG
GAGGACAGCACACTGCTGTATCCTCACACTGTATATGATTTCATCCAAGAGTAACGTTTC
TCCTCCTTTTTTTTTCCCTTTTTGTGTGCGTGCGTGCGTGCGTGTGTGTCGGGAAACAGT
CTATATTTTGTCCTAGATTGTACATTCTTCGCTGCAAGAAAACCATGCGGGCTTTGTACG
TTTTTCTGTGTTATTAAATGGCTAGATGACTTGTAACTGGGTCAGATTT