Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES01922
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:70465482:70469414:1 gene:SORBI_3003G393500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGGGCCGCCGTTGGGAAGCCAGCGTTCGGTGTCGCCGTCGCGCCGAAGTCGCAGGCG
GAGGAGCGGCTCGCCCTCGCGGAGCACGCCCTGCTCCAGTGGACTCGCTCCCCCGGCGCC
GACGCCGGCATCTGGGACGCCGACGCGAGCTACACCAACAGAGGCCTCCTGGCGGCGGTG
GACGAGGTGCTCCTCCTGGCGGCGGAAGACCCTTTCCCGTTCCCCGCGGCCGCGGCCGCC
TCCGCGCGCCTCCGCCTGGACAGCGCCGTCGGCGCCGCCGCGTCGCGCATGGTGGAGGAG
TTCCTGCGCGTCAGGGTCTGGAACGCCTCCCGGCTCCGCGGCGCCGTTCACAGGCTCTCG
CTCGCCTCCACTGGCCTCTCACTGCTGGTCTTCCCCAGCGCCGGTGAGAGGGCCAGCTCG
GCGGGCACCGGCGGGGAGGGGGAGGTCGACGCGTCCGACGGGAGCCGGTCGCGGGCGAGC
TCGGGCGTGCCTTACGATGTCGCGGACCTCTTGGACGCCGAGGTCTGGGACGGCCTGGAC
CTCATCTGCCCCGCAGGCGTGTCAGTCCTTCACGAGATCGCGCTTCGGATCGTTCGTGCC
GGATGCACCGAGGAACTCGTCCGGGCTTTCGCCAACGCTCCCTGCAATGTGCTAGACAGC
TTCTTGTCAATTCTTCGGGTCGAGTGCTCGCAGCAGACGGCGGAGGCCGTGATCAAGCGG
TGGACGACGGTGACGAAGATCATAGGGAAGGCCATAGTCGCCATGCGGAGGCAGCTGTAC
GCGCAGAACCCAGGCGCCTTCGACGGTTTCAGGGACGAATACTTGCTTGCCATCGCGGAG
AACCGCATCCTGATCCTGCTCGACTTCGCCAACGGATTCACCAGCATCACGTCGCACGAG
AAGCTCGTGTACATGCTTGGCATGTACGAGGCTCTCGCCGACGCCGCTCCCAGCCTCCTG
CTCCTGTTCAGCGGCGCGCGCAAGCAGCTCATCGCGGAGCGGACACAAGGTATCCTCATG
AAACTGGCCGGCGCGATAAGGGTCATGGTCAGCGGCGTCATGGCCAAGATCCAAGGCGAG
TGTATGTCCCCGCGCACGCCGAGCGCGGCGGCAGGCGGCGTCCACCCGCTGGCACGCGAC
GCCATGACCTGCGTCGAGCTGCTGGCGAGGCACCGCACCACGCTCGACCTTATCCTCGCG
GACGCAGGCGGCGGCGACGAGCGCGGCTCCCTCGCCGGGGTCGTCTCGGACCTGATCGCG
GGCCTGGAACACAACCTCCAGGGGAGACTCGCTGTCGCCTGCGCGGACGCGGGGGGATCG
CGGCACCTCTTCCTGGCGAACAACATCAGCTTCGTACTGAGCCGCGTCGCGGACGCCGAC
GGCGTGGCGGCCATGCTCGGGGCCGCGTTTGCCGCGCGGCGACGGAGCAGGCTCGAGCAG
CACCTAGCGAGCTACGCCGCGTCGTCATGGGGCCCCGTCGTCGCTCTCCTGGACACGCCC
GTGTGTGGCAGAGGCAAGCCGGCGAAAATTCTGGCGGAGTTCAACGCCGCGTTTACCAGA
ACGCGCGACAGCGAGGTGTGCCGGGAGGTCCCGGACCCCGTGCTCCGAGCGGTGCTGCGG
CACGCCTTGTCGGACATGGTGGTTCCTGCTTACTGCGCGTTTCTGCAGAAGCAACCCAAG
CTTTGGAAATCTGTCAGGTACACGGCTGATGATCTGGCCGAGTCGCTGTCGGAGTTGTTC
GAAGGGGAAGTTACGGATGCCAGAAAAATCTAG

Peptide Sequence

PEP ID

EES01922
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:70465482:70469414:1 gene:SORBI_3003G393500 transcript:EES01922 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGAAVGKPAFGVAVAPKSQAEERLALAEHALLQWTRSPGADAGIWDADASYTNRGLLAAV
DEVLLLAAEDPFPFPAAAAASARLRLDSAVGAAASRMVEEFLRVRVWNASRLRGAVHRLS
LASTGLSLLVFPSAGERASSAGTGGEGEVDASDGSRSRASSGVPYDVADLLDAEVWDGLD
LICPAGVSVLHEIALRIVRAGCTEELVRAFANAPCNVLDSFLSILRVECSQQTAEAVIKR
WTTVTKIIGKAIVAMRRQLYAQNPGAFDGFRDEYLLAIAENRILILLDFANGFTSITSHE
KLVYMLGMYEALADAAPSLLLLFSGARKQLIAERTQGILMKLAGAIRVMVSGVMAKIQGE
CMSPRTPSAAAGGVHPLARDAMTCVELLARHRTTLDLILADAGGGDERGSLAGVVSDLIA
GLEHNLQGRLAVACADAGGSRHLFLANNISFVLSRVADADGVAAMLGAAFAARRRSRLEQ
HLASYAASSWGPVVALLDTPVCGRGKPAKILAEFNAAFTRTRDSEVCREVPDPVLRAVLR
HALSDMVVPAYCAFLQKQPKLWKSVRYTADDLAESLSELFEGEVTDARKI

Transcript Sequence

Transcript ID

EES01922
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:70465482:70469414:1 gene:SORBI_3003G393500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GTTCGGGCAAACTCCACTCCAACTCCAATCAGCCGGAACACGGCGGGAAGGCGGCAGAAA
CAAATGCAGAGTTGACACCGGAGAGCCGAGGACGGGGAGTCAAGTTAGATTTATTAGACT
ACTTGACCATCTCCGCGTGCACTGCCCGACCTGAAAACTCTCAGAAATGCTAGTGAAGCC
CCCTAGTAATCTCCTTTTCGGATAGGGCATCGTTTCCGCGCTTGAACAACACACGGCAAC
GCGCGCCGGAAGGCCGGACCGGACCCAGCGCCACCACTCGGGCCCCTCGCACTCGCAGCA
TGGGGGCCGCCGTTGGGAAGCCAGCGTTCGGTGTCGCCGTCGCGCCGAAGTCGCAGGCGG
AGGAGCGGCTCGCCCTCGCGGAGCACGCCCTGCTCCAGTGGACTCGCTCCCCCGGCGCCG
ACGCCGGCATCTGGGACGCCGACGCGAGCTACACCAACAGAGGCCTCCTGGCGGCGGTGG
ACGAGGTGCTCCTCCTGGCGGCGGAAGACCCTTTCCCGTTCCCCGCGGCCGCGGCCGCCT
CCGCGCGCCTCCGCCTGGACAGCGCCGTCGGCGCCGCCGCGTCGCGCATGGTGGAGGAGT
TCCTGCGCGTCAGGGTCTGGAACGCCTCCCGGCTCCGCGGCGCCGTTCACAGGCTCTCGC
TCGCCTCCACTGGCCTCTCACTGCTGGTCTTCCCCAGCGCCGGTGAGAGGGCCAGCTCGG
CGGGCACCGGCGGGGAGGGGGAGGTCGACGCGTCCGACGGGAGCCGGTCGCGGGCGAGCT
CGGGCGTGCCTTACGATGTCGCGGACCTCTTGGACGCCGAGGTCTGGGACGGCCTGGACC
TCATCTGCCCCGCAGGCGTGTCAGTCCTTCACGAGATCGCGCTTCGGATCGTTCGTGCCG
GATGCACCGAGGAACTCGTCCGGGCTTTCGCCAACGCTCCCTGCAATGTGCTAGACAGCT
TCTTGTCAATTCTTCGGGTCGAGTGCTCGCAGCAGACGGCGGAGGCCGTGATCAAGCGGT
GGACGACGGTGACGAAGATCATAGGGAAGGCCATAGTCGCCATGCGGAGGCAGCTGTACG
CGCAGAACCCAGGCGCCTTCGACGGTTTCAGGGACGAATACTTGCTTGCCATCGCGGAGA
ACCGCATCCTGATCCTGCTCGACTTCGCCAACGGATTCACCAGCATCACGTCGCACGAGA
AGCTCGTGTACATGCTTGGCATGTACGAGGCTCTCGCCGACGCCGCTCCCAGCCTCCTGC
TCCTGTTCAGCGGCGCGCGCAAGCAGCTCATCGCGGAGCGGACACAAGGTATCCTCATGA
AACTGGCCGGCGCGATAAGGGTCATGGTCAGCGGCGTCATGGCCAAGATCCAAGGCGAGT
GTATGTCCCCGCGCACGCCGAGCGCGGCGGCAGGCGGCGTCCACCCGCTGGCACGCGACG
CCATGACCTGCGTCGAGCTGCTGGCGAGGCACCGCACCACGCTCGACCTTATCCTCGCGG
ACGCAGGCGGCGGCGACGAGCGCGGCTCCCTCGCCGGGGTCGTCTCGGACCTGATCGCGG
GCCTGGAACACAACCTCCAGGGGAGACTCGCTGTCGCCTGCGCGGACGCGGGGGGATCGC
GGCACCTCTTCCTGGCGAACAACATCAGCTTCGTACTGAGCCGCGTCGCGGACGCCGACG
GCGTGGCGGCCATGCTCGGGGCCGCGTTTGCCGCGCGGCGACGGAGCAGGCTCGAGCAGC
ACCTAGCGAGCTACGCCGCGTCGTCATGGGGCCCCGTCGTCGCTCTCCTGGACACGCCCG
TGTGTGGCAGAGGCAAGCCGGCGAAAATTCTGGCGGAGTTCAACGCCGCGTTTACCAGAA
CGCGCGACAGCGAGGTGTGCCGGGAGGTCCCGGACCCCGTGCTCCGAGCGGTGCTGCGGC
ACGCCTTGTCGGACATGGTGGTTCCTGCTTACTGCGCGTTTCTGCAGAAGCAACCCAAGC
TTTGGAAATCTGTCAGGTACACGGCTGATGATCTGGCCGAGTCGCTGTCGGAGTTGTTCG
AAGGGGAAGTTACGGATGCCAGAAAAATCTAGTGCTTTTGTGAACGTAGAACATTTTCAG
GTTGTACCAAACTGACGACCGCTTGACCATCTGTAAAACTACACTGCAAAGTTCCATTTC
TTCATGGATGCTATATATAGCAACCAGTAGTAGCAGTCAGAGTTCTTTATTAGCATGCAC
TTGATAATCTGAACATTCCATTGTAATAAAAGAAAAAGTGAACAGTCTGGAGTCTGGACT
TGTAAAATGTGACAGAAAGCAGCAACATTTCCATGTTGACAGAAGTCTACATAGTTTCTT
CTTTGGAGATTAATAAACAGATGGGACACAGATAGCATGAACAGCGAAAGCAGCAACATT
TCCATGTTGACAGAAGTCTACATAGTTTCTTCTTTGGAGATTAATAAACAGATGGGACAC
AGATAACATGAACAAGCTTAAGATACGATAGAAAACATCAACATTCTGGCTAGCAATGGC
TACTGCGTATTGGGCACGCGCACTTGGAGTTGGAATGAGAGTTCAGAGTTACCGCTGAGT
TCAAACTCGCAGGTGTCACCTTGCTGGAGTCGGTTCTCCCTGCAGATGTCAACCCACCCA
GTGATGAAGCCATTGAACCTAGGAGTGCATTGGTAGAGCACAGGCCAGAGTCTCATGCAT
GGGTCCTTGAGTATTACAACCTTCCTCCCATGTTTCTTCGTTCTTGGAAGAACCGGCAGT
CGACCGGGAAGCTCCTGTAAAAGATCTTTCAGAACTATGGTGCAGAACGGTGAGCTCAGA
GCAGTCAAGGAAATAGAATAGTCAGGATTACTCACAAGCCATGTTTGCCCTGGTGCAGGC
ACATCGATGCAAAACTCGATGCTGTTTGTTGTGAGTGCAAGAACGCCGCCAGATTCAGAG
GCTCCACTGTGGATGGATTCAGAGCCATTTCCTGCAGGTTGTACTGAAACGCATGAACTA
AATGTTGTGTGGTACATATGTGAAATTAGCATCCGTCCAGTTCATGGTTCAAAATTCGGG
GAGAGCATGGGGAGTCATAAATCACTATTAACACTGTAATACCTGTTTGCAGATGATTCT
GCCTGAGATCAGCAAGTTCATGAGGCTTTGCACTTCTCGACATGATTTCAGTAGCATGCT
GTCTTATACTATCTTGCATGTTACATTGGCCACCTTGTGCTTTATCCTGCTCCGTGGTCA
TGGAAGAATCTGCTGCAACAAGTACTGAATCTTTGTGATGACTAAAAAAACATGCAAACA
CAAAGGGATTTTTTTGGGCACGTGTAAATTCAGAAAGGTCGGAAAATAGTACTAACATTC
TTTATGTGCAGTTTGCTTGTTCATGAGAGGGAGCAAACTATTGCCTTTATCCTTATTACA
GCTGCTTAATCCACATTCATTAGAATGCATTTCAGCATCAGCTTGAGGAGAAGGGTTATC
CTCTCCAAATGATGGTGGCTCATTAGCAGGCAACGCGTTGATGTCTATATCATGCACTGA
GGAGTCAACAAAATATGATGTTCCTGTTCCAAGTACATCAGTCATCTCTTTATTTTCGAT
ACATAGTACTGCTTCTGGGATCAAAGAACGATGACCATCTCCCATAGAAGAAAGGTGATT
CTGCGGGGTATCCTCAAGGCAACTGAATCCTGAGGTTTGGCCAGTAGTAATTGGCTCTAC
CATATTCAGATCAACAGAAAATGATTCTGGGTTACACATATCGCTTTCAAATTCATATAT
ATCAGCCGACAGAAATATATCGTCGATACTCACTTCATTAAGATCCATCATAGCAAG