Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES01904
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:69992019:69994383:1 gene:SORBI_3003G388900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTGGCGTTCGCGAGCTCGTGCGCTTCTCCTACTTCGCTCGACCATTCCCCGGTCACCG
CCGCCACCTCCACCACCATATGCCACTCGAACCCTAACCCACCTCCCACCTCCCCGCCCT
CTCTCCCGCTTCCTCGCCTCCTCTCCGGATCCCATCCCCGATGCCTCTTCCTCCGCCGCC
GCGGATCCCTTCCCTGAAGCCTTCTCCTCCCCGACCGAGGCCTCCCAAGATGATGCTACT
GAGGCCGGGGAGGACAACCTGAGTTCGATGTGGGAGGAAGCTGGGGACGCCGACGATATC
TTCGTCTCCCCCAGCGGCGCCGACGCCGTAGCCGACGATGAGGAGGTCGCCCGCGTGTGC
GCCGCCGTCGAGTCCACTCCCGAGGACAAGATCGCGTCCACCCTCGCCGACATGATCGTG
GACTTCAACGAGCCGCTCCTCGCCGCAGTCCTCCTTGCTGCCGAGCAATGCTCCTGTAAG
AAGCTGATTTCCCTGTTCAACTATGCCGCGAAGAATAACCCCGCTGCCAAGAGCCTCTCG
AATCTTGAGATCCTCGTGAGCAAGGTAGCTGATTCTGATGAGATAGACAAGACAGACGCT
TATTTGCTTTGGGATTCGATCAAGGAAATTGGCTCTGTGCCAGGATCAGTGAGTACACCG
TTGTTGAATGAAATGATCGCCATATTTTGGAAGCTTGAGAAGTCGAAGGCAGCGCTGGAG
GTGTTTTCTAAGTTCGATGAGTTTGGTTGTACTCCGGACAGTGACAGCTATTATCTTGTG
ATTGAAGCAGCACGAAAGAAGTCCATGTTTCGCTCTGTTTCTGAAGTCTGTGAGAAGGTG
ATTGGCTCTGCCTGCTTCCCTAATGGTGAGAAGACTGGTAGGATTTTAACTTACCTTTGT
GAGGGGAAGAAGGTGAAGATGGCACACTCATTATACCTTGCAGCAAAGGAAAAAAAGATT
CAGATCCCAAAGTCAGCCTTGGATTTCCTTGTTGGTGCTTTGGCAAGGAATGATGAGACG
ACCGGTACTGCTCTGGAGCTGCTGGAAGAGTACCAAGGGGAATCGCTTAAGCATGCAGGC
AAGTCCTTTGCCACGGTTGTACATGCTTTGTGTAGGGTAAACAAAATGGAAGATGCAAAT
AGTTTGTTGACGAGGATGGTGCAGCTTGAAGAGTACCAAGGGGAATCTCTTAAGAATGCA
GGCAAGACATTTGCGACAGTTATACATGGTTTGTGTAGGAAAAAGAAATTGGAGGATGCA
AAAACATTGTTGATGAGGATGGTAAATGTTGGCCCAGCTCCAGGTAATGCAGTGTTTAAT
TTTGTCATCACAGCATTGTCAAAACAGAGAGAAATGGAGGATGCAAAAGGTTTGATGAGA
GTGATGGAGGGCCAAGGGATCACTCCTGATATCTATACTTACAGTGTGCTCATGAGTGGC
TACATTAAAGGAGGCATGATCAGTGAAGCCCATGATCTACTTCGTGAAGCTAAGAAAGTT
CATCCAAAGCTAAACAGGGTTGCTTATCATATAGTTATCCGTGGATACTGCAAGATGGAG
GACTTTGAGAAGGCCATTGAGTGCCTAAAGGAGATGAGGAAAGATGGGTTGCTGCCAAAT
GTGGACGAGTATGACAAACTGATTCAGTCATTGTGTCTGAAGGCTATGGACTGGAGAAGA
GCTGAGAAACTCCTGGAGGAAATGGAGGATAGTGGTTTATGCCTAAGGGGTATAAGTCAC
AGCCTCATAGCTGCAGTCAAGGAGTTGGAAGGAGAGGAAATGCAGTCAAAGGCGAGCCAA
GAAGCATAG

Peptide Sequence

PEP ID

EES01904
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:69992019:69994383:1 gene:SORBI_3003G388900 transcript:EES01904 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MWRSRARALLLLRSTIPRSPPPPPPPYATRTLTHLPPPRPLSRFLASSPDPIPDASSSAA
ADPFPEAFSSPTEASQDDATEAGEDNLSSMWEEAGDADDIFVSPSGADAVADDEEVARVC
AAVESTPEDKIASTLADMIVDFNEPLLAAVLLAAEQCSCKKLISLFNYAAKNNPAAKSLS
NLEILVSKVADSDEIDKTDAYLLWDSIKEIGSVPGSVSTPLLNEMIAIFWKLEKSKAALE
VFSKFDEFGCTPDSDSYYLVIEAARKKSMFRSVSEVCEKVIGSACFPNGEKTGRILTYLC
EGKKVKMAHSLYLAAKEKKIQIPKSALDFLVGALARNDETTGTALELLEEYQGESLKHAG
KSFATVVHALCRVNKMEDANSLLTRMVQLEEYQGESLKNAGKTFATVIHGLCRKKKLEDA
KTLLMRMVNVGPAPGNAVFNFVITALSKQREMEDAKGLMRVMEGQGITPDIYTYSVLMSG
YIKGGMISEAHDLLREAKKVHPKLNRVAYHIVIRGYCKMEDFEKAIECLKEMRKDGLLPN
VDEYDKLIQSLCLKAMDWRRAEKLLEEMEDSGLCLRGISHSLIAAVKELEGEEMQSKASQ
EA

Transcript Sequence

Transcript ID

EES01904
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:69992019:69994383:1 gene:SORBI_3003G388900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTGAAAGTCCGACTGAAAAATCTTGTCCTTTACTCCGAATTCGTCAAAATTACTAGGCAG
AAACAATCTTTCGGCCTAATAAAAAGTTATGGTGGCCCAACAAAACAGAAAGAGTCAGTT
AGGCCCAGCCCAGAAGGCCTTAAACCCTAGAATGAAAGAAACCTCCTCCACTACCACGAG
TGCTCCGCCTACACCACGGGTCCACGAAGCACGCAACACAACAATTAGAACACACCTCGC
CGCCGCCGCCGCCGAGGACGACGGCGATAATGTGGCGTTCGCGAGCTCGTGCGCTTCTCC
TACTTCGCTCGACCATTCCCCGGTCACCGCCGCCACCTCCACCACCATATGCCACTCGAA
CCCTAACCCACCTCCCACCTCCCCGCCCTCTCTCCCGCTTCCTCGCCTCCTCTCCGGATC
CCATCCCCGATGCCTCTTCCTCCGCCGCCGCGGATCCCTTCCCTGAAGCCTTCTCCTCCC
CGACCGAGGCCTCCCAAGATGATGCTACTGAGGCCGGGGAGGACAACCTGAGTTCGATGT
GGGAGGAAGCTGGGGACGCCGACGATATCTTCGTCTCCCCCAGCGGCGCCGACGCCGTAG
CCGACGATGAGGAGGTCGCCCGCGTGTGCGCCGCCGTCGAGTCCACTCCCGAGGACAAGA
TCGCGTCCACCCTCGCCGACATGATCGTGGACTTCAACGAGCCGCTCCTCGCCGCAGTCC
TCCTTGCTGCCGAGCAATGCTCCTGTAAGAAGCTGATTTCCCTGTTCAACTATGCCGCGA
AGAATAACCCCGCTGCCAAGAGCCTCTCGAATCTTGAGATCCTCGTGAGCAAGGTAGCTG
ATTCTGATGAGATAGACAAGACAGACGCTTATTTGCTTTGGGATTCGATCAAGGAAATTG
GCTCTGTGCCAGGATCAGTGAGTACACCGTTGTTGAATGAAATGATCGCCATATTTTGGA
AGCTTGAGAAGTCGAAGGCAGCGCTGGAGGTGTTTTCTAAGTTCGATGAGTTTGGTTGTA
CTCCGGACAGTGACAGCTATTATCTTGTGATTGAAGCAGCACGAAAGAAGTCCATGTTTC
GCTCTGTTTCTGAAGTCTGTGAGAAGGTGATTGGCTCTGCCTGCTTCCCTAATGGTGAGA
AGACTGGTAGGATTTTAACTTACCTTTGTGAGGGGAAGAAGGTGAAGATGGCACACTCAT
TATACCTTGCAGCAAAGGAAAAAAAGATTCAGATCCCAAAGTCAGCCTTGGATTTCCTTG
TTGGTGCTTTGGCAAGGAATGATGAGACGACCGGTACTGCTCTGGAGCTGCTGGAAGAGT
ACCAAGGGGAATCGCTTAAGCATGCAGGCAAGTCCTTTGCCACGGTTGTACATGCTTTGT
GTAGGGTAAACAAAATGGAAGATGCAAATAGTTTGTTGACGAGGATGGTGCAGCTTGAAG
AGTACCAAGGGGAATCTCTTAAGAATGCAGGCAAGACATTTGCGACAGTTATACATGGTT
TGTGTAGGAAAAAGAAATTGGAGGATGCAAAAACATTGTTGATGAGGATGGTAAATGTTG
GCCCAGCTCCAGGTAATGCAGTGTTTAATTTTGTCATCACAGCATTGTCAAAACAGAGAG
AAATGGAGGATGCAAAAGGTTTGATGAGAGTGATGGAGGGCCAAGGGATCACTCCTGATA
TCTATACTTACAGTGTGCTCATGAGTGGCTACATTAAAGGAGGCATGATCAGTGAAGCCC
ATGATCTACTTCGTGAAGCTAAGAAAGTTCATCCAAAGCTAAACAGGGTTGCTTATCATA
TAGTTATCCGTGGATACTGCAAGATGGAGGACTTTGAGAAGGCCATTGAGTGCCTAAAGG
AGATGAGGAAAGATGGGTTGCTGCCAAATGTGGACGAGTATGACAAACTGATTCAGTCAT
TGTGTCTGAAGGCTATGGACTGGAGAAGAGCTGAGAAACTCCTGGAGGAAATGGAGGATA
GTGGTTTATGCCTAAGGGGTATAAGTCACAGCCTCATAGCTGCAGTCAAGGAGTTGGAAG
GAGAGGAAATGCAGTCAAAGGCGAGCCAAGAAGCATAGTTTCTCTAGGACACTTGAATCC
ATACGTCTGCTAATTATTTTTTGGGTAGCACCTTTCTTTTTGAGCTTTTCATCTCTGATG
AGCTTGCAAGAAACATCATCTCTGTATGGCTGTACCTGTGTTTGTTTGTTGTTATTTACT
ACAATAATTTTGCATTTATATTTAAATGCTAGACTGACAGAAGAATATTTAGTTTTGGTC
TGGGGCTTCTGTTTATTTACAATATGAGATTTTCCATATGTCATTATACATGTCGAGAAT
TTATTTTCATGTCTTGCTTAAGAAC