Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES01884
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:69625904:69630284:1 gene:SORBI_3003G382900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCGCCCAAATCGAAGGCGGCCGCCGCCGCCGCGGAGCCGGTAGCCGTCGAGGACCTC
TTCACCTCGATTCACCGCCACATCGAGGCCGGTGCTTTCGAACAGGCCGCCAAGGTCGCC
GACCAAGTTCTCAAGGCGGCTCCAGGGGATGAGGACGCGGTGCGATGCAAGGTGGTGGCA
TACATCAAGGCCGACGAGATCGACAAGGCGTTCGCCGCGATCCGCGCCGCCGAGCGCCTC
CCGATCGACCTCAGCTACTACAAGGCCTACTGCTGCTACAGGCAAAACAAACTGCAAGAA
GCTCTGGAGCTTTTAAGAGGTCAAGAAGAAACTTCAGCTGTTCTCCAGCTGGAATCCCAG
ATCTTTTACCGGCTAGGAAGAATGAATGATTGCATGAGTAGCTATGAGAAGCTTCAGAAA
TTTAAAATTGACTCAATGGATCTGAAGATAAATATCATTGCTGCTCTGGTTGCTGCTGGA
AGGGCTTCTGAGGTGCAGGCAGCTATGAAGGCACATAAGGTTGATCTTACCACAAGAGCA
CTCAGGGATACTCGTAGCTTTGAGCTCGCATACAATTCTGCTTGCTCCTTGATAGAAAAC
AAGAAGTACTCTGAAGCCAAGGAGCAGTTGGACTTGGCGAAAAGAATTGGGAAAGAAGAG
CTTATGGTGGAAGACTATGGCGATGTGGAGATTGAATATGAATTAGCTCCTGTGTCTGCT
CAGCTTGCTTATGTGCAGCAGCTACAAGGACAATCTCAAGAAGCTCTGCAAACCTATCTT
AATATGATAAATGGGCAGTCAGCTGATCCATCATCACTTGCTGTGGCAACAACAAACCTT
ATTTCACTAAAAGGTACAAAAGATACTGCAGATAGCTTGAAGAAGCTTGATCGGCTTATT
GGAACAACTACAGCTCCAAACCAGTTACATCTTGTTGAAAACCTTGACTTCAAGTTATCC
CCTAGGCAGAAAGAAGCTCTTTATTCTGCACGTGTTCTTCTACTGCTCCATGCAAATAAA
ACTGATCAGGCACATGAGTTGGTCAGTGGACTGCTTGGTATGTTTCCAGATAGTGTATTC
CCTGTTTTACTTCAAGCCGCTGTTCATGTGAAAGAAAAGAAGGTTCAGAAAGCTGAAGAT
GTTCTTAGCCAGTATGCTGAGAAGAATCCTGAGAATTCTAAAGGGCTTCTCCTTGCACTT
GCTCAGATTGCTGCTAATGCCAACCATTTTCAGCTTGCTGCTGACTCACTATGCAGAATA
CCTGACATCCAGCACATGCCTGCAACAGTTGCTACATTAGTGGCTCTTAAAGAGCGCCTA
GGTGACTCCAATGCTGCAGCTTCTGTACTTGATTCTGCTATCCACTGGTGGAAGAATTCC
ATGACCGAGGATAACAAATTAGATATGTTAACACGGGAGGCTGCTTCATTTAAGCTCAGT
CATGGACATGATGAAGAGGCTTGTTTGTTGTACGAGGAACTCGTGAAGAGCCATGGAAGT
ATTGAAGCTTTGGCTGGGCTAGTGATGACTTCAGCACGCACAAACCTGGAGAAGGCTGAA
CAATATGAGAAGAAGCTGAAGCCATTGCCAGGCCTCAAAGGAGTTAATGTTGAGAGCTTG
GAGAAGACATCTGGTGCAAGGCATGTTGAAGGGCCCCAAGATATGAAGGTTGATGTTCCT
GAGGAAGTGAAGAAGCAAAAGGCAAAGAAGAGGAAGCGGAAGCCTAGATACCCGAAAGGC
TTTGATCCAGCAAACCCAGGGCCGCCACCAGATCCAGAGAGATGGCTACCAAGGAGAGAG
CGATCCAGTTACCGTCCAAAGAGGAAGGATAAGAGGGCTCAGGTCAGAGGTGCTCAAGGA
GCTGTGTCTAGGGAGACAGCAGCAACCAATGCCGGTGGTTCCTCAAAAGGAAGCCAAACC
ACCAGTTCATCCAAGACACCAGCGGCAAATACTGATCAGCCAAAAACTAGCAACAAATCC
AGGAAGAAGAAGTCCAGGTCTTAG

Peptide Sequence

PEP ID

EES01884
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:69625904:69630284:1 gene:SORBI_3003G382900 transcript:EES01884 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPPKSKAAAAAAEPVAVEDLFTSIHRHIEAGAFEQAAKVADQVLKAAPGDEDAVRCKVVA
YIKADEIDKAFAAIRAAERLPIDLSYYKAYCCYRQNKLQEALELLRGQEETSAVLQLESQ
IFYRLGRMNDCMSSYEKLQKFKIDSMDLKINIIAALVAAGRASEVQAAMKAHKVDLTTRA
LRDTRSFELAYNSACSLIENKKYSEAKEQLDLAKRIGKEELMVEDYGDVEIEYELAPVSA
QLAYVQQLQGQSQEALQTYLNMINGQSADPSSLAVATTNLISLKGTKDTADSLKKLDRLI
GTTTAPNQLHLVENLDFKLSPRQKEALYSARVLLLLHANKTDQAHELVSGLLGMFPDSVF
PVLLQAAVHVKEKKVQKAEDVLSQYAEKNPENSKGLLLALAQIAANANHFQLAADSLCRI
PDIQHMPATVATLVALKERLGDSNAAASVLDSAIHWWKNSMTEDNKLDMLTREAASFKLS
HGHDEEACLLYEELVKSHGSIEALAGLVMTSARTNLEKAEQYEKKLKPLPGLKGVNVESL
EKTSGARHVEGPQDMKVDVPEEVKKQKAKKRKRKPRYPKGFDPANPGPPPDPERWLPRRE
RSSYRPKRKDKRAQVRGAQGAVSRETAATNAGGSSKGSQTTSSSKTPAANTDQPKTSNKS
RKKKSRS

Transcript Sequence

Transcript ID

EES01884
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:69625904:69630284:1 gene:SORBI_3003G382900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGTTTTCTGGTGAGGAGAAAAACGTTGACGGATTGGCTTCAAGGCGAACCAGTTTTCTTG
CAGCGCGTGCTGGCGTGCTGCTCTCGTGAGCAGTCTCTCTCCCTCCTGCCCCACGCCTCC
CGATGCCGCCCAAATCGAAGGCGGCCGCCGCCGCCGCGGAGCCGGTAGCCGTCGAGGACC
TCTTCACCTCGATTCACCGCCACATCGAGGCCGGTGCTTTCGAACAGGCCGCCAAGGTCG
CCGACCAAGTTCTCAAGGCGGCTCCAGGGGATGAGGACGCGGTGCGATGCAAGGTGGTGG
CATACATCAAGGCCGACGAGATCGACAAGGCGTTCGCCGCGATCCGCGCCGCCGAGCGCC
TCCCGATCGACCTCAGCTACTACAAGGCCTACTGCTGCTACAGGCAAAACAAACTGCAAG
AAGCTCTGGAGCTTTTAAGAGGTCAAGAAGAAACTTCAGCTGTTCTCCAGCTGGAATCCC
AGATCTTTTACCGGCTAGGAAGAATGAATGATTGCATGAGTAGCTATGAGAAGCTTCAGA
AATTTAAAATTGACTCAATGGATCTGAAGATAAATATCATTGCTGCTCTGGTTGCTGCTG
GAAGGGCTTCTGAGGTGCAGGCAGCTATGAAGGCACATAAGGTTGATCTTACCACAAGAG
CACTCAGGGATACTCGTAGCTTTGAGCTCGCATACAATTCTGCTTGCTCCTTGATAGAAA
ACAAGAAGTACTCTGAAGCCAAGGAGCAGTTGGACTTGGCGAAAAGAATTGGGAAAGAAG
AGCTTATGGTGGAAGACTATGGCGATGTGGAGATTGAATATGAATTAGCTCCTGTGTCTG
CTCAGCTTGCTTATGTGCAGCAGCTACAAGGACAATCTCAAGAAGCTCTGCAAACCTATC
TTAATATGATAAATGGGCAGTCAGCTGATCCATCATCACTTGCTGTGGCAACAACAAACC
TTATTTCACTAAAAGGTACAAAAGATACTGCAGATAGCTTGAAGAAGCTTGATCGGCTTA
TTGGAACAACTACAGCTCCAAACCAGTTACATCTTGTTGAAAACCTTGACTTCAAGTTAT
CCCCTAGGCAGAAAGAAGCTCTTTATTCTGCACGTGTTCTTCTACTGCTCCATGCAAATA
AAACTGATCAGGCACATGAGTTGGTCAGTGGACTGCTTGGTATGTTTCCAGATAGTGTAT
TCCCTGTTTTACTTCAAGCCGCTGTTCATGTGAAAGAAAAGAAGGTTCAGAAAGCTGAAG
ATGTTCTTAGCCAGTATGCTGAGAAGAATCCTGAGAATTCTAAAGGGCTTCTCCTTGCAC
TTGCTCAGATTGCTGCTAATGCCAACCATTTTCAGCTTGCTGCTGACTCACTATGCAGAA
TACCTGACATCCAGCACATGCCTGCAACAGTTGCTACATTAGTGGCTCTTAAAGAGCGCC
TAGGTGACTCCAATGCTGCAGCTTCTGTACTTGATTCTGCTATCCACTGGTGGAAGAATT
CCATGACCGAGGATAACAAATTAGATATGTTAACACGGGAGGCTGCTTCATTTAAGCTCA
GTCATGGACATGATGAAGAGGCTTGTTTGTTGTACGAGGAACTCGTGAAGAGCCATGGAA
GTATTGAAGCTTTGGCTGGGCTAGTGATGACTTCAGCACGCACAAACCTGGAGAAGGCTG
AACAATATGAGAAGAAGCTGAAGCCATTGCCAGGCCTCAAAGGAGTTAATGTTGAGAGCT
TGGAGAAGACATCTGGTGCAAGGCATGTTGAAGGGCCCCAAGATATGAAGGTTGATGTTC
CTGAGGAAGTGAAGAAGCAAAAGGCAAAGAAGAGGAAGCGGAAGCCTAGATACCCGAAAG
GCTTTGATCCAGCAAACCCAGGGCCGCCACCAGATCCAGAGAGATGGCTACCAAGGAGAG
AGCGATCCAGTTACCGTCCAAAGAGGAAGGATAAGAGGGCTCAGGTCAGAGGTGCTCAAG
GAGCTGTGTCTAGGGAGACAGCAGCAACCAATGCCGGTGGTTCCTCAAAAGGAAGCCAAA
CCACCAGTTCATCCAAGACACCAGCGGCAAATACTGATCAGCCAAAAACTAGCAACAAAT
CCAGGAAGAAGAAGTCCAGGTCTTAGATCAGAATTTTAAAGTTATAACACAGTACAAAAG
AATATGTTCGTTTATCTTCTTGATGACTTGCAATTTTGGGCTGGATGGCATGCAGTTGCA
GATTTGCTTTGCTTTTACACTAATGTTTCAAGCGACTGAGACTATTGAAATTTTTGCTGA
GACGTGTTTCCATTGGTTGCCACAGTAGAATTCTATTTTTATAAGTTAATAAACCTTTGA
TTGATTTCGTTGG