Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES01686
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:66421611:66424140:1 gene:SORBI_3003G341500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGTCGCTGTCGTCGACCTGGCTGCTCCTTCTCCTCTCCTGCCTCGCGCTTGCGCTG
CTCGCGGCGGACGCCGAAGTGCACCACCATGAGTTCGTTGTCCAAGAGACGCCGGTGAAG
AGGCTGTGCAAGACACACAACATCATCACGGTGAACGGACAGTTTCCGGGGCCGATGCTG
GAGGTCAGGGAGGGCGACACGCTCGTGATCAACGTCGTCAACCGGGCGCAGTACAATGTC
ACCATCCACTGGCACGGCATCCGGCAGATGAGGACTGGGTGGGCGGACGGGCCTGAGTTC
GTGACGCAGTGCCCCATCAAGCCCGGCGGCAGCTACAAGTACCGGTTCACCATCGAGGGG
CAGGAGGGCACGCTGTGGTGGCACGCGCACAGCTCCTGGCTCAGGGCCACCGTCTACGGC
GGGCTCATCATCCGCCCCAGGGAGAACAAGACCTACCCTTTCGCCAAGCCCTCCCGCGAA
GTCCCCCTCATCCTCGGGGAGTGGTGGGATGCGAACCCGATCGATGTCATCCGGGAGGCT
CAGAAGACGGGCGGCGGTCCCAACGTCTCCGACGCCTTCACCATCAACGGCCAGCCCGGT
GACCTGTTCAAATGCTCCCAGAAAGAGACGACGGCCATTCCGGTGAAGGCCGGCGAGACG
GCGCTTCTACGGTTCATCAACGCGGCGCTCAACCACGAGCTGTTCGTCACCATCGCGCAG
CACAAGATGACGGTGGTCGCCACCGACGCGTCCTACACCAAGCCCTTCACCACCTCGGTG
CTCATGATCGCGCCGGGCCAGACCACCGACGTGCTCGTCACCATGGACCAGGCGCCCACC
CGGTACTACGTCGCCGCGCGCGCCTACGTCTCCGGCCAGAACGTGGCCTTCGACAACACC
ACCACCACGGCCGTCCTCGAGTACGACTGCGGCTGCGCCTCCGACTTCGGCCCCAAGATA
CAGCCGGCGTTCCCGGCGCTGCCGGCCTTCAACGACACCAGCGCCGCCACCGCCTTCGCC
GCGGGGATCAAGAGCCCCAACAGGGTCAAGATCCACGAGAACGTCGACGAATACCTCTTC
TTCACCGTCGGCCTCGGGCTGTTCAACTGCAAGCCGGGCCAGCTCTGCAAGGGTCCCAAC
AACAACACCCGCTTCACGGCCAGCATGAACAACGTCTCCTTCGTCTTCCCCAAGTCCGAC
TCCCTCCTCCACGCGCACTACTACAAGGTCCCCGGCGTCTTCACCACCGACTTCCCGGCG
TACCCGCCGGTGCAGTTCGACTACACGGGAAACGTCAGCCAGGCACTGTGGCAGCCGGTC
CCCGGGACCAAGCTGTACCCGCTCAGGTTCGGTTCCGTGGTGCAGGTCGTCCTGCAGGAC
ACCAGCATCGTCACGCCGGAGAACCACCCCATCCACATCCATGGCTACGATTTCTTCATC
CTCGCCGAGGGCTTCGGCAACTTCGACCCCAAGAAGGACGTCGAGAAGTTCAACTACGTC
GACCCGCCGCAGCGGAACACCGTGGCGGTGCCCGTCAACGGCTGGGCGGTCATCCAGTTC
GTCGCCGACAACCCAGGTGTGTGGCTCATGCATTGCCATCTGGACGTGCACATCACCTGG
GGCCTGGCAATGGCTTTCCTAGTGGAGGACGGGTATGGCGAACTGCAGTCCCTGGAGCCG
CCCCCAGTTGATCTTCCCATGTGCTAA

Peptide Sequence

PEP ID

EES01686
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:66421611:66424140:1 gene:SORBI_3003G341500 transcript:EES01686 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASLSSTWLLLLLSCLALALLAADAEVHHHEFVVQETPVKRLCKTHNIITVNGQFPGPML
EVREGDTLVINVVNRAQYNVTIHWHGIRQMRTGWADGPEFVTQCPIKPGGSYKYRFTIEG
QEGTLWWHAHSSWLRATVYGGLIIRPRENKTYPFAKPSREVPLILGEWWDANPIDVIREA
QKTGGGPNVSDAFTINGQPGDLFKCSQKETTAIPVKAGETALLRFINAALNHELFVTIAQ
HKMTVVATDASYTKPFTTSVLMIAPGQTTDVLVTMDQAPTRYYVAARAYVSGQNVAFDNT
TTTAVLEYDCGCASDFGPKIQPAFPALPAFNDTSAATAFAAGIKSPNRVKIHENVDEYLF
FTVGLGLFNCKPGQLCKGPNNNTRFTASMNNVSFVFPKSDSLLHAHYYKVPGVFTTDFPA
YPPVQFDYTGNVSQALWQPVPGTKLYPLRFGSVVQVVLQDTSIVTPENHPIHIHGYDFFI
LAEGFGNFDPKKDVEKFNYVDPPQRNTVAVPVNGWAVIQFVADNPGVWLMHCHLDVHITW
GLAMAFLVEDGYGELQSLEPPPVDLPMC

Transcript Sequence

Transcript ID

EES01686
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:66421611:66424140:1 gene:SORBI_3003G341500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATCGCCAACTCGGAAACCTTCAGAGGAAAGCCACTGCTAGCAAATCCCCCCGCGGTTCCA
TCGAGAGCCAACGCCGCCGCGGCAACATTTCGTTCTCGCCATGGCGTCGCTGTCGTCGAC
CTGGCTGCTCCTTCTCCTCTCCTGCCTCGCGCTTGCGCTGCTCGCGGCGGACGCCGAAGT
GCACCACCATGAGTTCGTTGTCCAAGAGACGCCGGTGAAGAGGCTGTGCAAGACACACAA
CATCATCACGGTGAACGGACAGTTTCCGGGGCCGATGCTGGAGGTCAGGGAGGGCGACAC
GCTCGTGATCAACGTCGTCAACCGGGCGCAGTACAATGTCACCATCCACTGGCACGGCAT
CCGGCAGATGAGGACTGGGTGGGCGGACGGGCCTGAGTTCGTGACGCAGTGCCCCATCAA
GCCCGGCGGCAGCTACAAGTACCGGTTCACCATCGAGGGGCAGGAGGGCACGCTGTGGTG
GCACGCGCACAGCTCCTGGCTCAGGGCCACCGTCTACGGCGGGCTCATCATCCGCCCCAG
GGAGAACAAGACCTACCCTTTCGCCAAGCCCTCCCGCGAAGTCCCCCTCATCCTCGGGGA
GTGGTGGGATGCGAACCCGATCGATGTCATCCGGGAGGCTCAGAAGACGGGCGGCGGTCC
CAACGTCTCCGACGCCTTCACCATCAACGGCCAGCCCGGTGACCTGTTCAAATGCTCCCA
GAAAGAGACGACGGCCATTCCGGTGAAGGCCGGCGAGACGGCGCTTCTACGGTTCATCAA
CGCGGCGCTCAACCACGAGCTGTTCGTCACCATCGCGCAGCACAAGATGACGGTGGTCGC
CACCGACGCGTCCTACACCAAGCCCTTCACCACCTCGGTGCTCATGATCGCGCCGGGCCA
GACCACCGACGTGCTCGTCACCATGGACCAGGCGCCCACCCGGTACTACGTCGCCGCGCG
CGCCTACGTCTCCGGCCAGAACGTGGCCTTCGACAACACCACCACCACGGCCGTCCTCGA
GTACGACTGCGGCTGCGCCTCCGACTTCGGCCCCAAGATACAGCCGGCGTTCCCGGCGCT
GCCGGCCTTCAACGACACCAGCGCCGCCACCGCCTTCGCCGCGGGGATCAAGAGCCCCAA
CAGGGTCAAGATCCACGAGAACGTCGACGAATACCTCTTCTTCACCGTCGGCCTCGGGCT
GTTCAACTGCAAGCCGGGCCAGCTCTGCAAGGGTCCCAACAACAACACCCGCTTCACGGC
CAGCATGAACAACGTCTCCTTCGTCTTCCCCAAGTCCGACTCCCTCCTCCACGCGCACTA
CTACAAGGTCCCCGGCGTCTTCACCACCGACTTCCCGGCGTACCCGCCGGTGCAGTTCGA
CTACACGGGAAACGTCAGCCAGGCACTGTGGCAGCCGGTCCCCGGGACCAAGCTGTACCC
GCTCAGGTTCGGTTCCGTGGTGCAGGTCGTCCTGCAGGACACCAGCATCGTCACGCCGGA
GAACCACCCCATCCACATCCATGGCTACGATTTCTTCATCCTCGCCGAGGGCTTCGGCAA
CTTCGACCCCAAGAAGGACGTCGAGAAGTTCAACTACGTCGACCCGCCGCAGCGGAACAC
CGTGGCGGTGCCCGTCAACGGCTGGGCGGTCATCCAGTTCGTCGCCGACAACCCAGGTGT
GTGGCTCATGCATTGCCATCTGGACGTGCACATCACCTGGGGCCTGGCAATGGCTTTCCT
AGTGGAGGACGGGTATGGCGAACTGCAGTCCCTGGAGCCGCCCCCAGTTGATCTTCCCAT
GTGCTAATGATCAGCCTGAAGACACTGTGTTGAGGAATCCGAAGACTGTTTCACGTTGTA
TGTTAATTATGACTTTTTTGGGTATATATTTGTGATCTTATTTCTAGGGGACTTGATTTT
CCAGCTTGTTTTGAACTTTTCCCCTGTAAATCTATGTAACTTTCATTGCCATTCAGCATA
TTATTTGAGAATAAATTATTTCTTTGTA