Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES01528
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:63773197:63777914:1 gene:SORBI_3003G309300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIP1P description:hypothetical protein
Sequence

ATGCAGAGCTCGCTCGCGCGGCCGCTGCGGCCGCCGGTACTGGCCGGATGCGGCGGTAGA
CGGGGCCACGGGGCCCCACGCGGCTCGGTATCCGTGGCACGGTGCCGCGCTGAGGCGGCG
CCGCCGACGGTGGGGACGGCGTCTAGGGCGCCTGCGGGCCCGTACACCGGGAGGGACCCG
GAGGTGAAGAAGCCCGCGTGGCTGCGGCAGCGCGCTGCGCAGGGGGACAAGTACGCTCGC
CTGCGGGAGTCCATCGGCGAGCTCAAGCTCAACACCGTCTGCGTCGAGGCACAGTGCCCC
AACATCGGCGAGTGTTGGAACGGAGGTGGAGGGGCCGGCGGCGAAGGGGACGGCATCGCG
ACGGCCACCATCATGGTGCTTGGTGACACCTGCACGCGCGGCTGTCGATTCTGCGCTGTG
AAGACCAGCAACAAGCCGCCCCCGCCGGATCCCCTGGAGCCTCTAAACACGGCTTTGGCA
GTTGCAAGCTGGGGAGTAGACTATGTTGTGCTAACCAGTGTCGATAGAGATGACTTACCT
GATGGTGGAAGCAGCCATTTTGCTCAGACAGTGAGAGCTTTAAAGGAGCTCAAACCTGGA
ATACTGGTGGAGTGCTTAACCTCGGATTTTCGAGGTGACCTGGAGGCTGTTTCATCTTTA
GCAAACTCCGGCCTAGATGTTTATGCGCACAACATTGAAACTGTGAGGAGTCTGCAGAGG
ATTGTGAGGGATCCTCGGGCAGGGTATGATCAGAGCTTGGCAGTTCTCAAGCATGCAAAA
GATTGCAGGGAGGGCATGATTACAAAGTCTTCTATCATGCTTGGTCTTGGAGAGACTGAT
GAAGAGGTGAAACAAGCAATGATAGATCTACGGGCAATTGGTGTTGACATCCTTACTTTG
GGCCAGTACTTGCAGCCAACAGAAAGACATCTAACAGTAAGAGAGTATGTGACTCCCGAG
AAGTTCCAGTTTTGGAAGGAGTATGGAGAATCGGTCGGTTTCCGATATGTTGCTAGTGGA
CCCTTGGTTCGGTCTTCCTACCGTGCAGGAGAGCTCTTTGTCCAAAATTTGGTCAGAAAT
AACAAAACTGGGTCTTCCTCATCTTAA

Peptide Sequence

PEP ID

EES01528
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:63773197:63777914:1 gene:SORBI_3003G309300 transcript:EES01528 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIP1P description:hypothetical protein
Sequence

MQSSLARPLRPPVLAGCGGRRGHGAPRGSVSVARCRAEAAPPTVGTASRAPAGPYTGRDP
EVKKPAWLRQRAAQGDKYARLRESIGELKLNTVCVEAQCPNIGECWNGGGGAGGEGDGIA
TATIMVLGDTCTRGCRFCAVKTSNKPPPPDPLEPLNTALAVASWGVDYVVLTSVDRDDLP
DGGSSHFAQTVRALKELKPGILVECLTSDFRGDLEAVSSLANSGLDVYAHNIETVRSLQR
IVRDPRAGYDQSLAVLKHAKDCREGMITKSSIMLGLGETDEEVKQAMIDLRAIGVDILTL
GQYLQPTERHLTVREYVTPEKFQFWKEYGESVGFRYVASGPLVRSSYRAGELFVQNLVRN
NKTGSSSS

Transcript Sequence

Transcript ID

EES01528
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:63773197:63777914:1 gene:SORBI_3003G309300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIP1P description:hypothetical protein
Sequence

GGAGATGAAAATTTTTTTAGTGTTACATCAGATGTGTCGGAAGGATGTCATGAGGGCTTT
TTAGAAACTAATAAAAAAACAAATTACATAGCTAGTTTGGAAACTACAAGACAAATCTAT
TAAGTATAATTAATCTGTCATTAGCAATATGAGTTACTGTAGCACTTAAGGATAATCATG
AACTAACTAGGCTTAAAAAATTTGTCTCGTGATTTTCAACCAAATTATGTAATTAGTTTA
TTTTTTTATCTATATTTAATGTTCTATGTATGTGTCAAAGATGGGATGGATGAAAATTTT
TTGGGTGGGGAATAAACAGGCCTTATTGACTGTTTCGTTCATCTGAATCAATGAGTTGCA
GTCGCTCTATTGTTTAAAGAATCACATTTGATATTCTTGCAATAGAAAAAAGGTATGAAT
TGATTCACGTTCCATCCTGTTGCGCTTAGTTTTTTCTTAATAGCAGGGCGTAAAAGGTTG
CCTAGATCGATATGACGCTCATACAGAAGATTGTTCAAATAATAACATCTGATCTGAGCA
TCCTTTGTAAATGTCAGGACTTGTTTGGAATTGAACCCAAAAAATCGTTTTGATTCCCTA
GCACTAGAAAATCCAGGGTAAAATCCTGCGTTTGCTGGAGTTAGCGCATTCCAAGTCACG
CTAAACTTGATCAAATGGAAATTAAGCCACCAACACCACAATTCTACAAACCCTGCCTCG
TCTACGACTGTGACCTACCAACACACCCACATTTTGACCAAATTCCTCGCAACGGCGACA
AAACCCAGGAACAAGCAGCAGCAGGAGCCAGCAAGGCAGGCGATCAAAAACCAGCCAAGC
ACTTCATCCTTGGTATCATCGCCGGCCTAATATCGCCCCCCTATTATACCCCTGGCTTCT
GAAATCGTCGAGCTGGTTTGTCTCCCACACAGGGGGTAAAACGGGAACGCTAAAACCTCA
CCCCTCCGCTCCGCTTGGAAGTTGGAACACATCACCTCCACGGCTACACACCGCTCCGCA
CCACGACGACCGCGCCCGGCCCGATTCCGCCGGCCGGTAACGATGCAGAGCTCGCTCGCG
CGGCCGCTGCGGCCGCCGGTACTGGCCGGATGCGGCGGTAGACGGGGCCACGGGGCCCCA
CGCGGCTCGGTATCCGTGGCACGGTGCCGCGCTGAGGCGGCGCCGCCGACGGTGGGGACG
GCGTCTAGGGCGCCTGCGGGCCCGTACACCGGGAGGGACCCGGAGGTGAAGAAGCCCGCG
TGGCTGCGGCAGCGCGCTGCGCAGGGGGACAAGTACGCTCGCCTGCGGGAGTCCATCGGC
GAGCTCAAGCTCAACACCGTCTGCGTCGAGGCACAGTGCCCCAACATCGGCGAGTGTTGG
AACGGAGGTGGAGGGGCCGGCGGCGAAGGGGACGGCATCGCGACGGCCACCATCATGGTG
CTTGGTGACACCTGCACGCGCGGCTGTCGATTCTGCGCTGTGAAGACCAGCAACAAGCCG
CCCCCGCCGGATCCCCTGGAGCCTCTAAACACGGCTTTGGCAGTTGCAAGCTGGGGAGTA
GACTATGTTGTGCTAACCAGTGTCGATAGAGATGACTTACCTGATGGTGGAAGCAGCCAT
TTTGCTCAGACAGTGAGAGCTTTAAAGGAGCTCAAACCTGGAATACTGGTGGAGTGCTTA
ACCTCGGATTTTCGAGGTGACCTGGAGGCTGTTTCATCTTTAGCAAACTCCGGCCTAGAT
GTTTATGCGCACAACATTGAAACTGTGAGGAGTCTGCAGAGGATTGTGAGGGATCCTCGG
GCAGGGTATGATCAGAGCTTGGCAGTTCTCAAGCATGCAAAAGATTGCAGGGAGGGCATG
ATTACAAAGTCTTCTATCATGCTTGGTCTTGGAGAGACTGATGAAGAGGTGAAACAAGCA
ATGATAGATCTACGGGCAATTGGTGTTGACATCCTTACTTTGGGCCAGTACTTGCAGCCA
ACAGAAAGACATCTAACAGTAAGAGAGTATGTGACTCCCGAGAAGTTCCAGTTTTGGAAG
GAGTATGGAGAATCGGTCGGTTTCCGATATGTTGCTAGTGGACCCTTGGTTCGGTCTTCC
TACCGTGCAGGAGAGCTCTTTGTCCAAAATTTGGTCAGAAATAACAAAACTGGGTCTTCC
TCATCTTAACCAAATATCTTCTGCTAGAGCAGTCCATGGGATCCCTACACACTGTATGTT
AAAAGCGGCAAAACAAGAGTAGAACAGTGTAATCATCTGGTTCTTCCAAAAGCTGAGACA
CAGCTCCTTTTTCCTTTTCTTTTCGGATGGTATGCACACCTT