Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES01475
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:62767921:62773957:1 gene:SORBI_3003G295400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAGCCTCGCGGGCTCCGCCCTGGAGGCGGCGCTACAGGCGGTGGGGCGCGGCCTCGAC
GCAGCTGGAGACCACCGGCTGCTCTACTGCAAGGGAGCCGGAAGGCTCGTGGCGCTCGAG
GAGGACCGTGCGCGGGACCTCCGTCTCCCCGACGGCGGCGTCCTCCCGAGCGTGCCCCCC
GACGTCGAGGTCGAGCAGTGCCGCAGAGACCCCCAGCGCATCCGCCCGTTCCCCTCCGGC
CCAGGCTCCGCCGTAGCGGACGCGCCCTTCGTCTGCAGCTTCGATAAGATGGCTGAGTAT
TTCAACTTGAAGTCATGCTTGTCCGAGACAGTACCGCTGGGTTCCTTCAACTCTCTGTTC
AGCTTCACCGGTTCATGGAAGAATGATGCGGCGGCCACGAAGGCCCTTGCGATCGATGGC
TATTCTCTGCCTCTGTTTCGAGTGAAAATTAGGAGTTCTGAACTGACACTGCTTGAGAGC
GTTAAGCGCGCGATCCCAAATGTTTGGGATCCATCAGCATTGGCTAGCTTTATTGAGAAC
TATGGTACCCATATTATTATCTCTGTTACGGTTGGTGGTAAGGATGAGGTATACATTAAG
CAGCATTCATCGTCCCAATTGTCAGAGCTGGAGTTCAAAAATTATGTGAGGGAAATTGGG
AGGGAAAGATTCTCAGATGTGGAAAATAAGTCAAATGCAACTCCTATCAATTACAGCGAG
AAGGATATGACAGTAATATTCAGAAGGAGGGGTGGTTGCGATCTTGTTCAAAGTTTTAGT
GATTGGAAAGGAACTGTTGCCTCAGCACCAGATGTCATAGGCATGACCTTTCTCTCAATT
GTCTCTCTTGTTGACGATATACCAGGAAAGAAGCACCTTGCTCGTGCAGTTGAGCTATAC
TTGACCTACAAACCTCCAATTGAAGAATTACAGTACTTCTTAGATTTTCAAGTCCCACTA
GTTTGGGCTCCAGCCCCACCGGGTATTGCTGGTCACCACAGGAAGGAACCTGTCTGTCCA
TCACTTCAGTTTAGCTTAATGGGCCCAAAGCTCTTCATTAGCACAGAACAGATCTCTGTT
GGGCGTCGACCAGTTGTTGGCCTCAAACTGCTCTTGGAAGGAGCCAAACAGAATCGTCTG
GCTATTCATTTGCAGCACCTTGGATCATTACCAAAGATATTCCTACCTCATTGGGACTCC
CATATTACCATTGGACCTCCAAAATGGCAAGGTCCTGAAGAACAGGACAGCAGATGGTTC
GAGCCAATCAAATGGAAGAACTTTGCTCATGTTAGCACAGCACCCATAGAGTACACTGAA
ACAAATATTACGGACCTATCTGGTGTTTATATTGTTACAGGAGCACAGTTGGGAGTGTGG
GATTTTGGTGCAAAGAGTGTTCTCCATCTTAAACTTTTGTTCTCCAGGGTTCCTGGGTGC
ACAATTAGAAGATCAGTGTGGGACCACAGCCCATCAAGTTCTTCGATTCATAAAACAGAC
GAATCTTCATCATCCTCAAGTGATAATGCCAAACTTCTGAAGATCGTTGACATGACAGAA
ACATTGAAGGGCCCACAAGATGCGCCTGGCCACTGGCTGATCACAGGTGCTAAGTTGGGT
GTTGAGAAAGGCAGGATTGTTGTGCGTGCAAAGTACTCCTTATTGAATTATTAA

Peptide Sequence

PEP ID

EES01475
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:62767921:62773957:1 gene:SORBI_3003G295400 transcript:EES01475 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSLAGSALEAALQAVGRGLDAAGDHRLLYCKGAGRLVALEEDRARDLRLPDGGVLPSVPP
DVEVEQCRRDPQRIRPFPSGPGSAVADAPFVCSFDKMAEYFNLKSCLSETVPLGSFNSLF
SFTGSWKNDAAATKALAIDGYSLPLFRVKIRSSELTLLESVKRAIPNVWDPSALASFIEN
YGTHIIISVTVGGKDEVYIKQHSSSQLSELEFKNYVREIGRERFSDVENKSNATPINYSE
KDMTVIFRRRGGCDLVQSFSDWKGTVASAPDVIGMTFLSIVSLVDDIPGKKHLARAVELY
LTYKPPIEELQYFLDFQVPLVWAPAPPGIAGHHRKEPVCPSLQFSLMGPKLFISTEQISV
GRRPVVGLKLLLEGAKQNRLAIHLQHLGSLPKIFLPHWDSHITIGPPKWQGPEEQDSRWF
EPIKWKNFAHVSTAPIEYTETNITDLSGVYIVTGAQLGVWDFGAKSVLHLKLLFSRVPGC
TIRRSVWDHSPSSSSIHKTDESSSSSSDNAKLLKIVDMTETLKGPQDAPGHWLITGAKLG
VEKGRIVVRAKYSLLNY

Transcript Sequence

Transcript ID

EES01475
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:62767921:62773957:1 gene:SORBI_3003G295400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGTCAAACCCAACCACCTCAGCAGCGGGGTCGCCTTCCTCTCCTCCGGTTGTCCCCAGAA
ACCGTGTCCCCTACTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCCTCGATC
AACAGCAACAGCGGCGGTCAGAAGCTTCCGTCGCGACAGCTCCCGACCTCCTGCCGGTCT
TCCCCTCTCGTAGCCGGCGCGAATCCCGAGGCGGAGGAGGAAGAGGAAGAGGGGGGCGGA
GTGGGGGCGGGCCCCCATCAGCCATGAGCCTCGCGGGCTCCGCCCTGGAGGCGGCGCTAC
AGGCGGTGGGGCGCGGCCTCGACGCAGCTGGAGACCACCGGCTGCTCTACTGCAAGGGAG
CCGGAAGGCTCGTGGCGCTCGAGGAGGACCGTGCGCGGGACCTCCGTCTCCCCGACGGCG
GCGTCCTCCCGAGCGTGCCCCCCGACGTCGAGGTCGAGCAGTGCCGCAGAGACCCCCAGC
GCATCCGCCCGTTCCCCTCCGGCCCAGGCTCCGCCGTAGCGGACGCGCCCTTCGTCTGCA
GCTTCGATAAGATGGCTGAGTATTTCAACTTGAAGTCATGCTTGTCCGAGACAGTACCGC
TGGGTTCCTTCAACTCTCTGTTCAGCTTCACCGGTTCATGGAAGAATGATGCGGCGGCCA
CGAAGGCCCTTGCGATCGATGGCTATTCTCTGCCTCTGTTTCGAGTGAAAATTAGGAGTT
CTGAACTGACACTGCTTGAGAGCGTTAAGCGCGCGATCCCAAATGTTTGGGATCCATCAG
CATTGGCTAGCTTTATTGAGAACTATGGTACCCATATTATTATCTCTGTTACGGTTGGTG
GTAAGGATGAGGTATACATTAAGCAGCATTCATCGTCCCAATTGTCAGAGCTGGAGTTCA
AAAATTATGTGAGGGAAATTGGGAGGGAAAGATTCTCAGATGTGGAAAATAAGTCAAATG
CAACTCCTATCAATTACAGCGAGAAGGATATGACAGTAATATTCAGAAGGAGGGGTGGTT
GCGATCTTGTTCAAAGTTTTAGTGATTGGAAAGGAACTGTTGCCTCAGCACCAGATGTCA
TAGGCATGACCTTTCTCTCAATTGTCTCTCTTGTTGACGATATACCAGGAAAGAAGCACC
TTGCTCGTGCAGTTGAGCTATACTTGACCTACAAACCTCCAATTGAAGAATTACAGTACT
TCTTAGATTTTCAAGTCCCACTAGTTTGGGCTCCAGCCCCACCGGGTATTGCTGGTCACC
ACAGGAAGGAACCTGTCTGTCCATCACTTCAGTTTAGCTTAATGGGCCCAAAGCTCTTCA
TTAGCACAGAACAGATCTCTGTTGGGCGTCGACCAGTTGTTGGCCTCAAACTGCTCTTGG
AAGGAGCCAAACAGAATCGTCTGGCTATTCATTTGCAGCACCTTGGATCATTACCAAAGA
TATTCCTACCTCATTGGGACTCCCATATTACCATTGGACCTCCAAAATGGCAAGGTCCTG
AAGAACAGGACAGCAGATGGTTCGAGCCAATCAAATGGAAGAACTTTGCTCATGTTAGCA
CAGCACCCATAGAGTACACTGAAACAAATATTACGGACCTATCTGGTGTTTATATTGTTA
CAGGAGCACAGTTGGGAGTGTGGGATTTTGGTGCAAAGAGTGTTCTCCATCTTAAACTTT
TGTTCTCCAGGGTTCCTGGGTGCACAATTAGAAGATCAGTGTGGGACCACAGCCCATCAA
GTTCTTCGATTCATAAAACAGACGAATCTTCATCATCCTCAAGTGATAATGCCAAACTTC
TGAAGATCGTTGACATGACAGAAACATTGAAGGGCCCACAAGATGCGCCTGGCCACTGGC
TGATCACAGGTGCTAAGTTGGGTGTTGAGAAAGGCAGGATTGTTGTGCGTGCAAAGTACT
CCTTATTGAATTATTAACCAAATGTTTAAAGCATTCATTCACTCACTCTAATATTGAGCA
CTGTGTTTTAAGGTAGCATTTGTTCTTTTGTTTTTCATGTATGGCTTTCCGTCCCCCTTG
TAACTTGATGTGGATCCATGCTTTTGATTAATGCCTTGAGTGAAGTAGCATGAAGATGTT
TATGCTCAGTTCAAAAGTGTTTGATCTGGCATCAGTCATCTCTTCCACAGCCATACGATT
GTGACAGTGAAAGTGATGTGTTCCATGAGTTTTGGCACTGGTGTTTTGCTCTCCAAATTC
ATCAGTGGAACATAACTAGTATATTCACCCCTGGTTACTAAGTGCTAACAGTTTTGTTGA
TTTTCATCAATTGGATTCATGTTGTACATCTGGGTGAGTCACTTTTTGACTGCGTGATTG
ATGGTCTGGCACAGATGAGAATGGCAGTGCATGGTTGTTGCATATTGGCATAATTCTCAG
GTTCAACAGTTGATAATGAGTATGGAATTCTTCAAAGTTTGTTTTGTCTCTCATAGATAT
TGCCTGGTTACTCTACCAGACGGTTGGTGTGAACGATAAGTGCCTGTGTGGGTGAGGGGA
TGCAACATTTCTTTGTACTACTTTAACTTTTTTTTTTGGTTCACCCATTTTGTTGTGTAT
GTATCTAGGCACATTTTTATATTTATATGCATAGCAAAATGGATGTACT