Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES01312
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:60335950:60342740:1 gene:SORBI_3003G266400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCGCTGCAGAGCTGGCGCAAGGCGTACGGCGCGCTCAAGGACACCACCACCGTC
AGCCTCGCCAACCTCAACTCCGACTTCAAGGATCTGGATGTCGCGATCGTGAGGGCCACC
AACCACGTGGAGAGCCCGCCCAAGGAGCGCCACCTGCGCAAGATTGTGGCGGCGACGTCC
ATCGCGAGGCCACGGGCGGACGTCGCCTACTGCATCCATGCGCTTGCCCGGCGACTCGCC
AAAACCAGGAACTGGATTGTTGCCCTGAAGACACTTGTAGTGATCCATAGGCTTCTTCGG
GAAGGTGATCCTGCATTCCGCGAAGAGTTTCTTACATTTACTCAGAGAGTGCAAATTTTG
CAGTTATCAAACTTCAAGGATGATTCCAGCCCAATTGCTTGGGATTGTTCTTCATGGGTT
CGCACATACGGTTTATTTTTGGAGGAAAAACTAGAATGCTTCAGGGTCTTGAAGTATGAC
ATTGAAGCTGAGCGTTTATCAAAGCAAGGTCAAGGACCTGAAAAGGGCCACAGTAGAACC
AGGGAATTGAATTCTCAGGACTTGCTGGAGCAATTGCCAGCACTGCAGCAATTATTATAT
CGACTTATTGGTTGTCGGGCAGAAGGAGCTGCAAATAACAATTATCTGGTGCAGTATGCT
CTAGCCCAGGTTCTTAAAGAAAGCTTCAAAATTTATTGTGCAATAAATGATGGAATTATC
AACCTTGTTGACAAGTTCTTTGAGATGCCAAAGCATGAAGCACTAAAAGCCCTTGACATT
TACAGGAGGGCTGGCCAGCAGGCTGGAAACCTATCTGACTTCTATGAAAGTTGTCGAGGT
TTAGAGCTCGCAAGAAATTTCCAGTTTCCCACTTTGAGGGAGCCACCACAAACATTCCTT
TCAACCATGGAGGAGTATGTGAAGGAGGCTCCACGTATGATGCCAGTTATAGAGCCACTG
GAGCTTCCTGAGCAGCTTCTTCTGACATACAAACCAGAAGAAGAAGAAGAAGAAGAAGTT
CGTGAGTCTGTTCCTATTGCAGAGGAGAAACTGCAAGTTGTTGAAGAACCTGCTCCAGTT
CCTTCCTCCCAAATAGCTTCGCCTCCCAGGCCTGAGATTGCAGATACTGGTGATTTACTG
GGGTTAGGTGATTCAACCCATACTGTGTCGGCAATAGAGGAGAGCAACGCATTGGCCTTG
GCAATTCTTCCGACAGGTGTTGATAATTCAACAACTACACAGCAAGATAGAGGATTTGAT
CCAACAGGATGGGAACTTGCTCTTGTTACTACAAGCAGCAACATGACTCCACTGTCTATG
GAGAGTAATTTGGGTGGTGGATTTGACAAGCTCACATTGGACAGCCTATACGATGATGGA
ACCTACAGGCAGATGCAGCAACAACAGCTATACGGCTCAGCCCCTCCCAATCCCTTCATG
GCAAGCGATCCCTTCGCCGTGTCAAATCAAGTAGCTCCCCCACCGTCAGTTCAAATGGCA
GCCATGGCTCCACAGCCCCAGCATTTGCCCATGATGATTGAAGCAAATCCCTTCGGACCA
CCACAGCAGCATCACGCGGGCATGGCTCCTGCAGCAAACCCCTTCCTCGATGCTGGGTTC
GGTGCGTTCCCGGCAGGAAATGGAATGCATCCACAGACCAACCCCTTCGGAGGCGCCGCA
CAACTTCTCTAG

Peptide Sequence

PEP ID

EES01312
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:60335950:60342740:1 gene:SORBI_3003G266400 transcript:EES01312 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAALQSWRKAYGALKDTTTVSLANLNSDFKDLDVAIVRATNHVESPPKERHLRKIVAATS
IARPRADVAYCIHALARRLAKTRNWIVALKTLVVIHRLLREGDPAFREEFLTFTQRVQIL
QLSNFKDDSSPIAWDCSSWVRTYGLFLEEKLECFRVLKYDIEAERLSKQGQGPEKGHSRT
RELNSQDLLEQLPALQQLLYRLIGCRAEGAANNNYLVQYALAQVLKESFKIYCAINDGII
NLVDKFFEMPKHEALKALDIYRRAGQQAGNLSDFYESCRGLELARNFQFPTLREPPQTFL
STMEEYVKEAPRMMPVIEPLELPEQLLLTYKPEEEEEEEVRESVPIAEEKLQVVEEPAPV
PSSQIASPPRPEIADTGDLLGLGDSTHTVSAIEESNALALAILPTGVDNSTTTQQDRGFD
PTGWELALVTTSSNMTPLSMESNLGGGFDKLTLDSLYDDGTYRQMQQQQLYGSAPPNPFM
ASDPFAVSNQVAPPPSVQMAAMAPQPQHLPMMIEANPFGPPQQHHAGMAPAANPFLDAGF
GAFPAGNGMHPQTNPFGGAAQLL

Transcript Sequence

Transcript ID

EES01312
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:60335950:60342740:1 gene:SORBI_3003G266400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCAAGGCATGAAGACAACCAGGAAAACAGTTCAGCTACGCCGCCAGCCCCATCTGAAAAT
GAATGAATTCTGCATGTGTGCATCGGATGAGAGATTGAGATCCAGCACTCAGTTGGGCAC
TAGAGTAGGCTGCAACTGCAACTGCCGCTCCGGGACGGGCAGTAGGCACCGACATTGCAC
TAATAACAAATCCGGTGTAATTATGTAATCCAAAAATACTAATAACAAATCCGGTCGTCT
CAGAACGAACTTCCACTGGCGTGGAAGGTGAGGAACGCGCTTCTCTGCGGTCAGGCGGAA
GGTCCCCTATTTGGTGGGGGTGGGGGAAGAAGGTTGGCAGTTCCGTGTACCGCGAGCCCG
CGCCCGAAATTTCACAACACCAAGGCCGAGCCAAACCGACCGTAGGGGGGAGAAGTACAA
GGCCACCACCACAAGGAGTGCGAGGCGAGGGCGAACGCCGGGGGCAAGCGCGGCGGCGGA
GGCAGCAATGGCGGCGCTGCAGAGCTGGCGCAAGGCGTACGGCGCGCTCAAGGACACCAC
CACCGTCAGCCTCGCCAACCTCAACTCCGACTTCAAGGATCTGGATGTCGCGATCGTGAG
GGCCACCAACCACGTGGAGAGCCCGCCCAAGGAGCGCCACCTGCGCAAGATTGTGGCGGC
GACGTCCATCGCGAGGCCACGGGCGGACGTCGCCTACTGCATCCATGCGCTTGCCCGGCG
ACTCGCCAAAACCAGGAACTGGATTGTTGCCCTGAAGACACTTGTAGTGATCCATAGGCT
TCTTCGGGAAGGTGATCCTGCATTCCGCGAAGAGTTTCTTACATTTACTCAGAGAGTGCA
AATTTTGCAGTTATCAAACTTCAAGGATGATTCCAGCCCAATTGCTTGGGATTGTTCTTC
ATGGGTTCGCACATACGGTTTATTTTTGGAGGAAAAACTAGAATGCTTCAGGGTCTTGAA
GTATGACATTGAAGCTGAGCGTTTATCAAAGCAAGGTCAAGGACCTGAAAAGGGCCACAG
TAGAACCAGGGAATTGAATTCTCAGGACTTGCTGGAGCAATTGCCAGCACTGCAGCAATT
ATTATATCGACTTATTGGTTGTCGGGCAGAAGGAGCTGCAAATAACAATTATCTGGTGCA
GTATGCTCTAGCCCAGGTTCTTAAAGAAAGCTTCAAAATTTATTGTGCAATAAATGATGG
AATTATCAACCTTGTTGACAAGTTCTTTGAGATGCCAAAGCATGAAGCACTAAAAGCCCT
TGACATTTACAGGAGGGCTGGCCAGCAGGCTGGAAACCTATCTGACTTCTATGAAAGTTG
TCGAGGTTTAGAGCTCGCAAGAAATTTCCAGTTTCCCACTTTGAGGGAGCCACCACAAAC
ATTCCTTTCAACCATGGAGGAGTATGTGAAGGAGGCTCCACGTATGATGCCAGTTATAGA
GCCACTGGAGCTTCCTGAGCAGCTTCTTCTGACATACAAACCAGAAGAAGAAGAAGAAGA
AGAAGTTCGTGAGTCTGTTCCTATTGCAGAGGAGAAACTGCAAGTTGTTGAAGAACCTGC
TCCAGTTCCTTCCTCCCAAATAGCTTCGCCTCCCAGGCCTGAGATTGCAGATACTGGTGA
TTTACTGGGGTTAGGTGATTCAACCCATACTGTGTCGGCAATAGAGGAGAGCAACGCATT
GGCCTTGGCAATTCTTCCGACAGGTGTTGATAATTCAACAACTACACAGCAAGATAGAGG
ATTTGATCCAACAGGATGGGAACTTGCTCTTGTTACTACAAGCAGCAACATGACTCCACT
GTCTATGGAGAGTAATTTGGGTGGTGGATTTGACAAGCTCACATTGGACAGCCTATACGA
TGATGGAACCTACAGGCAGATGCAGCAACAACAGCTATACGGCTCAGCCCCTCCCAATCC
CTTCATGGCAAGCGATCCCTTCGCCGTGTCAAATCAAGTAGCTCCCCCACCGTCAGTTCA
AATGGCAGCCATGGCTCCACAGCCCCAGCATTTGCCCATGATGATTGAAGCAAATCCCTT
CGGACCACCACAGCAGCATCACGCGGGCATGGCTCCTGCAGCAAACCCCTTCCTCGATGC
TGGGTTCGGTGCGTTCCCGGCAGGAAATGGAATGCATCCACAGACCAACCCCTTCGGAGG
CGCCGCACAACTTCTCTAGGCATATACTTTGCATTACATAGAAGATGTGCAATCTGTAGA
TATCCATGCAAGACAAGCAATTGGCGTGTCTGGAACCGCTTTTCACCGTCAGACCGTTAC
CAATCCTATGTTGCACCATCTTCATCTCGCCCTTCCTTATTAGGCCTTGGCCGCTTGGCC
TTTCTTGTGTAGCTTTCCGTTTTGCTGTGGCTGGTTTCCATCTTCTGACTGGGCCATTGC
ACCCTCTCATTGTAAAGAAATTTGTTTCGGGCTTTCGGCTGATGTAAAACTACGTGCAAT
AAGCAGCAGAGCAGCAGTCCTGGACCCAACTAACTCAT