Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES01142
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:57172781:57176753:1 gene:SORBI_3003G232600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAAGCTGAGAGCAAAAGGCCTCGGCCTCCTGCTTCTCCTTGTCCTGCTTGCTATTTGC
TCCACCATTGAAGTCAGCGAGGCGAGAAGAGGCAAGCATTGGCGGTCGTCGAGGAGCTCA
CCAGGCTCCTCTCAGCTCAAGAAAGGCAAAGGAAAGAAGAGCAGCTCCCGCCGGCAACAC
GGCAGCAACCGGCCAAGTCCGAAGCCACCGGTCAGCTCCACGCCAAGCTCTGGTGCTGGT
AAAGGAAATCAGAATCCATACCAACCAAGCCCGAATGCCCCTCCAAGCCCTGCCAATGGC
AGTAGGCATTCCACTCCCAAGCTGCCGCCGACTTCAAGCTGTGGGAAGGGTCATCAACAG
CCATCGCAGCCGCCACCAGCAACCTCGCAGGGTGCAGTATTCAATGTGGTTGATTTTGGA
GCCAAGGGTGACGGAGTTACAGATGATACTAAGGCTTTTGAAGGAGCGTGGGCTGCTGCC
TGCAACCAGGGGGCATCTACAGTTCTCGTACCACCAGAACTAGAGTTCCTTGTTGGGCCA
ATCTCGTTCTCTGGACCTTACTGCAAACCGAATATTGTCTTTCAGCTGGAAGGAACAATC
CTAGCTCCAACCAGTGCTAAATCCTGGGGTTCTGGCTTGCTCCAGTGGCTGGAGTTCACC
AAACTAAATGGAATAGTTATTCAAGGGAACGGCATTATAAATGGGAGAGGGCAACAGTGG
TGGACCTACTTAGACCCAGAGGATGAGGATGATGATGACACGTACGATGTGGAGTTTGAA
AGAATGCCACAGATTAAACCTACAGCATTGAGGTTTTATGGTAGTTTCAACGTTGTAGTA
GCTGGTATCACTATTGTCAACAGCTCACAGTGCCATCTTAAGTTTGACAACTGTCAAGGA
GTGATGGTCCATGACGTGACTATATCCTCCCCTGAGAACAGTCTCAACACTGACGGAATA
CACCTGCAGAACTCCAAAGATGTCAGCATTCATCATACAAACCTGGCTTGTGGTGACGAC
TGCATCTCCATCCAGACAGGATGCAGCAACATAAATATACACAACGTGAATTGTGGACCA
GGCCATGGAATCAGCATAGGTGGACTAGGTCGAGACAACACAAAAGCATGTGTATCAAAT
GTTACAGTAAGAGACGTCAACATGTTCAGAACCATGAATGGTGTCAGAATCAAGACCTGG
CAGGGTGGTGTAGGATTGGTTCAAGACATAAGGTTCTCAAATATACAAGTCTCAGAGGTT
CAAACACCCATTATCATAGATCAGTTTTATTGTGACAGAAGCACTTGCAGAAATCAAACA
TCAGCAGTGGCAGTATCAGGAGTTCAATATGAGAATATCAGAGGAACATTTACAATCAAG
CCTGTCCATTTTGCATGCAGTGACAGCTTACCTTGTTCAGGAATCTCTCTTACCGGTGTG
CAACTCAGACCAGTGCAAGTACCCCACTACCACCTGAATAACCCATTCTGCTGGCAAGCT
TTTGGGGAGCTCTACACTCCAACCGTCCCTCCCATAGCTTGCTTGCAGATTGGAAAACCT
GCTGGCAATAACTTACAGTCATATGACGACATATGCTGA

Peptide Sequence

PEP ID

EES01142
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:57172781:57176753:1 gene:SORBI_3003G232600 transcript:EES01142 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MKLRAKGLGLLLLLVLLAICSTIEVSEARRGKHWRSSRSSPGSSQLKKGKGKKSSSRRQH
GSNRPSPKPPVSSTPSSGAGKGNQNPYQPSPNAPPSPANGSRHSTPKLPPTSSCGKGHQQ
PSQPPPATSQGAVFNVVDFGAKGDGVTDDTKAFEGAWAAACNQGASTVLVPPELEFLVGP
ISFSGPYCKPNIVFQLEGTILAPTSAKSWGSGLLQWLEFTKLNGIVIQGNGIINGRGQQW
WTYLDPEDEDDDDTYDVEFERMPQIKPTALRFYGSFNVVVAGITIVNSSQCHLKFDNCQG
VMVHDVTISSPENSLNTDGIHLQNSKDVSIHHTNLACGDDCISIQTGCSNINIHNVNCGP
GHGISIGGLGRDNTKACVSNVTVRDVNMFRTMNGVRIKTWQGGVGLVQDIRFSNIQVSEV
QTPIIIDQFYCDRSTCRNQTSAVAVSGVQYENIRGTFTIKPVHFACSDSLPCSGISLTGV
QLRPVQVPHYHLNNPFCWQAFGELYTPTVPPIACLQIGKPAGNNLQSYDDIC

Transcript Sequence

Transcript ID

EES01142
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:57172781:57176753:1 gene:SORBI_3003G232600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTCTCTTTCCCTCCTCACAATCACAGGCCTCCCGCTCTGTGTTCTCTATCTACTACCCAG
CACACAATACACACTCTAATCTCCACACAGCCAGTAGATACGGACAGAAGGATGAAGCTG
AGAGCAAAAGGCCTCGGCCTCCTGCTTCTCCTTGTCCTGCTTGCTATTTGCTCCACCATT
GAAGTCAGCGAGGCGAGAAGAGGCAAGCATTGGCGGTCGTCGAGGAGCTCACCAGGCTCC
TCTCAGCTCAAGAAAGGCAAAGGAAAGAAGAGCAGCTCCCGCCGGCAACACGGCAGCAAC
CGGCCAAGTCCGAAGCCACCGGTCAGCTCCACGCCAAGCTCTGGTGCTGGTAAAGGAAAT
CAGAATCCATACCAACCAAGCCCGAATGCCCCTCCAAGCCCTGCCAATGGCAGTAGGCAT
TCCACTCCCAAGCTGCCGCCGACTTCAAGCTGTGGGAAGGGTCATCAACAGCCATCGCAG
CCGCCACCAGCAACCTCGCAGGGTGCAGTATTCAATGTGGTTGATTTTGGAGCCAAGGGT
GACGGAGTTACAGATGATACTAAGGCTTTTGAAGGAGCGTGGGCTGCTGCCTGCAACCAG
GGGGCATCTACAGTTCTCGTACCACCAGAACTAGAGTTCCTTGTTGGGCCAATCTCGTTC
TCTGGACCTTACTGCAAACCGAATATTGTCTTTCAGCTGGAAGGAACAATCCTAGCTCCA
ACCAGTGCTAAATCCTGGGGTTCTGGCTTGCTCCAGTGGCTGGAGTTCACCAAACTAAAT
GGAATAGTTATTCAAGGGAACGGCATTATAAATGGGAGAGGGCAACAGTGGTGGACCTAC
TTAGACCCAGAGGATGAGGATGATGATGACACGTACGATGTGGAGTTTGAAAGAATGCCA
CAGATTAAACCTACAGCATTGAGGTTTTATGGTAGTTTCAACGTTGTAGTAGCTGGTATC
ACTATTGTCAACAGCTCACAGTGCCATCTTAAGTTTGACAACTGTCAAGGAGTGATGGTC
CATGACGTGACTATATCCTCCCCTGAGAACAGTCTCAACACTGACGGAATACACCTGCAG
AACTCCAAAGATGTCAGCATTCATCATACAAACCTGGCTTGTGGTGACGACTGCATCTCC
ATCCAGACAGGATGCAGCAACATAAATATACACAACGTGAATTGTGGACCAGGCCATGGA
ATCAGCATAGGTGGACTAGGTCGAGACAACACAAAAGCATGTGTATCAAATGTTACAGTA
AGAGACGTCAACATGTTCAGAACCATGAATGGTGTCAGAATCAAGACCTGGCAGGGTGGT
GTAGGATTGGTTCAAGACATAAGGTTCTCAAATATACAAGTCTCAGAGGTTCAAACACCC
ATTATCATAGATCAGTTTTATTGTGACAGAAGCACTTGCAGAAATCAAACATCAGCAGTG
GCAGTATCAGGAGTTCAATATGAGAATATCAGAGGAACATTTACAATCAAGCCTGTCCAT
TTTGCATGCAGTGACAGCTTACCTTGTTCAGGAATCTCTCTTACCGGTGTGCAACTCAGA
CCAGTGCAAGTACCCCACTACCACCTGAATAACCCATTCTGCTGGCAAGCTTTTGGGGAG
CTCTACACTCCAACCGTCCCTCCCATAGCTTGCTTGCAGATTGGAAAACCTGCTGGCAAT
AACTTACAGTCATATGACGACATATGCTGAAAGTGCCTTTGTCTGTTGATTGGTGCTTAT
CCATGAGTGGTCGTTGTGATACATGCGACCCCATTTGCACCATTGCTTGTTGATGTGCAC
ATATACAGATATTTTGAGGTCATCTTATTACAACATTTTAACTTTTTCATCAAAGTAAAC
ATAAATATAT