Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES01117
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:56689227:56692103:1 gene:SORBI_3003G228700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTTTCTTGGAGCTCTGTTCGCAGCTGTACAGGCCTCAGCACCACGCAGCCTCCTGTTC
TACGGCGTCCCTGGCCTTGTCCTCCTGCTGTGGCAGGGCGGCCGGCTGCTGAACAAGCTA
TGGTGGGAGCCTCGGCGGCTGGAGCGGGCTCTGCGCTCGCAGGGCCTCCGCGGCACGTCC
TACCGCTTCCTCACGGGCGACCTCACGGAGTTCGGCCGCCTCAACAAGGAAGCCTGGGCG
GCAAGGCCGCTGCCGCTGGGGTGCCACGACGTCGTGCCCCGCGTCACGCCGTTCCTCCAC
AACAACGTCCGGGAGCACGGCAAGACGTGCTTCTCCTGGTTCGGGCCGATTCCCAACGTG
ACCATCACCGACCCCGCGCTGGTCAGGGACGTGCTCTCCAACAAGTTCGGCCACTTGGAG
AAGCCCCAGTTCCCGGCCCTGACGAAGCTCATCTCCGACGGACTCACCAGCCATGAGGGC
GAGAAATGGGTCAAGCACAGGAGGATCCTCAACCCTGCATTCCATCTCGAGAAGCTCAAG
CTCATGCTGCCTGCGTTCTCTGCATGCTGCGAAGAGCTTGTGAGCAGATGGGCGCAGCAG
TCCTTTGGTTCCGACGGTTGGTGCGAGCTGGACGTGTGGCCGGAGCTCCAGGCCCTCACA
GGAGATGTCATCTCCCGCACCGCATTTGGCAGCAGCTACCTTGAAGGCAGAAGGATTTTC
GAGCTCCAGTCCGAGCAAGCTGAGCGCTTCGTAGGCGCCGTTCAGAAGATTGCAATTCCA
GGTTACATGTTTTTACCAACCAAAAACAACAGAAGGATGCGCCAAATCAACAAGGAGGTT
AACTCGATTTTACGAGGGCTGATTGGGAAAAGAATGCAAGCTATGAAAGACGAAGAAGGT
GAAAGCAGGACCAGCGATGACGATCTCCTGGGCTTACTGCTGGAGTCCAATACGAGGCAC
GCAGATGAGAACGGCCAATCCACCCTTGGAATGACGATAGAAGATGTCATCGAGGAGTGC
AAGCTGTTCTACTTTGCAGGGATGGAGACAACGTCGGTGTTGTTGACATGGACGATGGTG
CTGTTGAGCATGCACCCTGAGTGGCAAGACCGTGCAAGGGAGGAAGTGATTGGCCTGTTC
GGGAGAAACAAACCAGACTACGAGGGACTGAGCCGCCTGAAAACAGTCAATATGATCATT
TACGAGATTCTCCGATTATACCCGCCGGCCGTTGTGTTCAGCCGGAAAACCTACAAGGAG
ATGAAGGTCGGAGACGTGACGTTGCCAGCCGGTGCGTTCATTGAGCTCCCTGTTCTATTC
ATGCACCATGACCCTGACACCTGGGGAAACGACGTGCACGATTTCAAGCCGGAGAGGTTC
GCCGAGGGGATCTCCAAGGCGTCCAAGGAGCCGGGTGCGTTCCTCCCGTTCGGCTGGGGG
CCTCGCATCTGCATCGGCCAGAACTTCGCGCTGCTCGAGGCCAAGATGGCGCTGTGCATG
ATCCTTCAGCGATTTGAGTTTGAGCTCGCGCCGTCGTATACCCATGCGCCGCATACCGTG
ATAACGATGCATCCTATGCATGGTGCACAGATTAAGCTCAGGGCGATCTGA

Peptide Sequence

PEP ID

EES01117
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:56689227:56692103:1 gene:SORBI_3003G228700 transcript:EES01117 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MFLGALFAAVQASAPRSLLFYGVPGLVLLLWQGGRLLNKLWWEPRRLERALRSQGLRGTS
YRFLTGDLTEFGRLNKEAWAARPLPLGCHDVVPRVTPFLHNNVREHGKTCFSWFGPIPNV
TITDPALVRDVLSNKFGHLEKPQFPALTKLISDGLTSHEGEKWVKHRRILNPAFHLEKLK
LMLPAFSACCEELVSRWAQQSFGSDGWCELDVWPELQALTGDVISRTAFGSSYLEGRRIF
ELQSEQAERFVGAVQKIAIPGYMFLPTKNNRRMRQINKEVNSILRGLIGKRMQAMKDEEG
ESRTSDDDLLGLLLESNTRHADENGQSTLGMTIEDVIEECKLFYFAGMETTSVLLTWTMV
LLSMHPEWQDRAREEVIGLFGRNKPDYEGLSRLKTVNMIIYEILRLYPPAVVFSRKTYKE
MKVGDVTLPAGAFIELPVLFMHHDPDTWGNDVHDFKPERFAEGISKASKEPGAFLPFGWG
PRICIGQNFALLEAKMALCMILQRFEFELAPSYTHAPHTVITMHPMHGAQIKLRAI

Transcript Sequence

Transcript ID

EES01117
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:56689227:56692103:1 gene:SORBI_3003G228700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCACATCTCACATCCAGTCAAAGTCCACTTCGCATTGTTGTATCATCAGCAAAATGTT
TCTTGGAGCTCTGTTCGCAGCTGTACAGGCCTCAGCACCACGCAGCCTCCTGTTCTACGG
CGTCCCTGGCCTTGTCCTCCTGCTGTGGCAGGGCGGCCGGCTGCTGAACAAGCTATGGTG
GGAGCCTCGGCGGCTGGAGCGGGCTCTGCGCTCGCAGGGCCTCCGCGGCACGTCCTACCG
CTTCCTCACGGGCGACCTCACGGAGTTCGGCCGCCTCAACAAGGAAGCCTGGGCGGCAAG
GCCGCTGCCGCTGGGGTGCCACGACGTCGTGCCCCGCGTCACGCCGTTCCTCCACAACAA
CGTCCGGGAGCACGGCAAGACGTGCTTCTCCTGGTTCGGGCCGATTCCCAACGTGACCAT
CACCGACCCCGCGCTGGTCAGGGACGTGCTCTCCAACAAGTTCGGCCACTTGGAGAAGCC
CCAGTTCCCGGCCCTGACGAAGCTCATCTCCGACGGACTCACCAGCCATGAGGGCGAGAA
ATGGGTCAAGCACAGGAGGATCCTCAACCCTGCATTCCATCTCGAGAAGCTCAAGCTCAT
GCTGCCTGCGTTCTCTGCATGCTGCGAAGAGCTTGTGAGCAGATGGGCGCAGCAGTCCTT
TGGTTCCGACGGTTGGTGCGAGCTGGACGTGTGGCCGGAGCTCCAGGCCCTCACAGGAGA
TGTCATCTCCCGCACCGCATTTGGCAGCAGCTACCTTGAAGGCAGAAGGATTTTCGAGCT
CCAGTCCGAGCAAGCTGAGCGCTTCGTAGGCGCCGTTCAGAAGATTGCAATTCCAGGTTA
CATGTTTTTACCAACCAAAAACAACAGAAGGATGCGCCAAATCAACAAGGAGGTTAACTC
GATTTTACGAGGGCTGATTGGGAAAAGAATGCAAGCTATGAAAGACGAAGAAGGTGAAAG
CAGGACCAGCGATGACGATCTCCTGGGCTTACTGCTGGAGTCCAATACGAGGCACGCAGA
TGAGAACGGCCAATCCACCCTTGGAATGACGATAGAAGATGTCATCGAGGAGTGCAAGCT
GTTCTACTTTGCAGGGATGGAGACAACGTCGGTGTTGTTGACATGGACGATGGTGCTGTT
GAGCATGCACCCTGAGTGGCAAGACCGTGCAAGGGAGGAAGTGATTGGCCTGTTCGGGAG
AAACAAACCAGACTACGAGGGACTGAGCCGCCTGAAAACAGTCAATATGATCATTTACGA
GATTCTCCGATTATACCCGCCGGCCGTTGTGTTCAGCCGGAAAACCTACAAGGAGATGAA
GGTCGGAGACGTGACGTTGCCAGCCGGTGCGTTCATTGAGCTCCCTGTTCTATTCATGCA
CCATGACCCTGACACCTGGGGAAACGACGTGCACGATTTCAAGCCGGAGAGGTTCGCCGA
GGGGATCTCCAAGGCGTCCAAGGAGCCGGGTGCGTTCCTCCCGTTCGGCTGGGGGCCTCG
CATCTGCATCGGCCAGAACTTCGCGCTGCTCGAGGCCAAGATGGCGCTGTGCATGATCCT
TCAGCGATTTGAGTTTGAGCTCGCGCCGTCGTATACCCATGCGCCGCATACCGTGATAAC
GATGCATCCTATGCATGGTGCACAGATTAAGCTCAGGGCGATCTGATGATCATCGTATAT
ATACGGTGATCGTAAACTTGTTTACTAAAATAAACTATACCTATTGGGTCGTCTTGGAAA
TAAATAACTTTGTATTGGTCGGCCATGCATGTGTATCAAGTTAACCTTGATCACTGTGTA
AGATTTTGGGCCATTCTTTAAAGTTTCACACACTACGACTGCAACACCAATCCTTAATTT
CCAGTTTGTCCAAAAACGTTTTCAGAGGAAGGATGCGAGATTGTCCGCGTCCCTAGAAGG
TCTATCAATGAGACTTTGCATACACATGGTACTGACTACCTCTGCTTCAAAACTAATTTA
AAAAATGGGCCGTCCTGCTCACCACGTGTGGCCTTGCTTCAGCAACAGGCAGCGAAGGTG
CACTTGAACTAAGCACACCTAGAATGGCCCGAGAGTAGAGAGGGGTTAAAACTAGTTAGC
AAAGAGAGTGACATTCAGTTCTCTCAAAAAAAAAGAGAGTGACATTCAGATAGTAAATAC
TAGTCTCCTCCAAACAACACTCTGTCTCTGGGTTATACATCTCCTAAAGATGCCACCGCC
GTCGCCTGCACGGGCTTTCATAGCAAAGGCTGAGCTAGATGACATGGGCCGGGGCAAGTA
TTTAAAGAAGCGCGTGAAGAAGATGAACTTGTAATGGCCGTCTTGGGCCTGGTCCATTTT
ACCAGCAATATGTACTCATTGAAGATGAGAGGTAGATTTCGATGTGTCGAGTTAACTATG
TCTTCTTCCCTAATCTTTGCTCCCCTAATCTGAAACATTCCTATGAAATAGCATTTGTAT
GCCTGCAATCTTTTTCTAGAGCAAATGTATTTAGCATGCTATATTTTGCTTTGTATTCTT
AGTAGATAACTCTTTTATGTGAATGTGATCCAGATACTTAGTT