Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES01116
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:56680107:56683387:1 gene:SORBI_3003G228600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTTCTTGAAGCGTCGTTTGCCGCTGCAGCCTCAGTGCCATGGACCTTCCTTCTCGGT
GGTCTCACGGGCCTGCTGCTCCTGTGGCAGGCCGGCCGGCTGCTGCACCAGTTCTGGTGG
CAGCCTCGGCTTCTGGAGCTTGCGCTGCGTGCACAGGGCATCCGCGGCACGTCGTACCGC
TTCCCCGCCGGCGACCTCAAGGAATACGGCCGACTTGCCAAGGAGGCCTGGTCTAAGCCC
CTGCCGCTGCGTTGCCACGACATCGCACAACGGGTGACGCCGTTCGTGCATCAGCTTGTC
CGGGAGCACGGGAAGACGAGCATGTCTTGGTTTGGCCCCAGCCCCAAGGTGACCATCGTC
GATCCTGAGCTGGCCAGGGACGTGCTGTCCAACAAGTTCGGCCACTTTGAGAAGCTCAAG
TTCCCGGCGCTGTCCAAGATGCTGGGCGCCGGCGTGGCGAACCACGAGGGTGAGAAATGG
GTCAAGCACAGGAGGATCCTCAACTCTGCTTTCCATCTTGAGAAGCTCAAGCGCATGCTG
CCAGCGTTTTCTTCGTGCTGCGAAGAGCTGGTGAGCAGATGGGCGGAGTCCCTCGGCTCT
GACAGTGCGTGCGAGCTGGATGTTTGGCCGGAGCTGCAGAATCTCACTGGAGACGTCATT
TCTCGCACTGCCTTCAGCAGCAGCTACCACGAAGGAAGAAGGATTTTCCAGCTACAAGCC
GAGCAAGCTTCGCTTGTCATGACGAACATTCGGAAGATTATGATGATTCCCGGTTACTTG
TCCTTGCCAACCGCAAACAACAGAAAGATGAGCAGAAACAACAAAGAGGTGGAATCAATT
CTGCGAGATATAATTGGGAAAAGAATTCAATCCATGAAACAAGGCGAGAGCACCAAAGAT
GACTTGCTGGGTCTATTGCTGGAGACAAACATGAGAGACACAGACGGGAATAATAATAGC
CAACCCACCGGCACGGCGATGACGATCGAAGATGTCATCGAGGAGTGCAAGGTGTTCTAT
TTCGCGGGAATGGAGACCACAGCGGTGCTGCTCACATGGACAATGATTGTACTCAGCATG
CACCCAGAGTGGCAGGACCGTGCGCGGGAGGAGGTGACAGGTTTGTTTGGCAAAAACAAG
CCTGAATACGAAGGCCTCAGCCGCCTCAAAACCGTGACCATGGTCCTTTACGAGGTTCTC
CGGCTGTACCCGCCGGCCATTTCTTTCGTCCGGAGAACATACAAGGAGCAGGAGATGGGC
GGCATCAGGTACCCCGCTGGCGTGATCTTGGAGCTGCCCGTGCTCCTCATCCACCACGAC
CCAGATATCTGGGGAAGCGACGCGCGCGAGTTCAGGCCCGACAGATTCGCCGAGGGGATC
TCCAAGGCATGCAAGGACTCGGGCGCGTTCCTCCCGTTCGGCTGGGGGCCGCGCATCTGC
ATCGGCCAGAACTTCGCGCTGCTCGAGGCCAAGATGGCGCTGTGCATGATCCTTCAGCGG
TTTGAGTTTGAGCTCGCGCCGTCGTATACTCATGCGCCGCATACCGTGATAACGATGCAT
CCTATGCATGGTGCGCCGCTTAAGCTCAGAGCAATATGA

Peptide Sequence

PEP ID

EES01116
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:56680107:56683387:1 gene:SORBI_3003G228600 transcript:EES01116 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVLEASFAAAASVPWTFLLGGLTGLLLLWQAGRLLHQFWWQPRLLELALRAQGIRGTSYR
FPAGDLKEYGRLAKEAWSKPLPLRCHDIAQRVTPFVHQLVREHGKTSMSWFGPSPKVTIV
DPELARDVLSNKFGHFEKLKFPALSKMLGAGVANHEGEKWVKHRRILNSAFHLEKLKRML
PAFSSCCEELVSRWAESLGSDSACELDVWPELQNLTGDVISRTAFSSSYHEGRRIFQLQA
EQASLVMTNIRKIMMIPGYLSLPTANNRKMSRNNKEVESILRDIIGKRIQSMKQGESTKD
DLLGLLLETNMRDTDGNNNSQPTGTAMTIEDVIEECKVFYFAGMETTAVLLTWTMIVLSM
HPEWQDRAREEVTGLFGKNKPEYEGLSRLKTVTMVLYEVLRLYPPAISFVRRTYKEQEMG
GIRYPAGVILELPVLLIHHDPDIWGSDAREFRPDRFAEGISKACKDSGAFLPFGWGPRIC
IGQNFALLEAKMALCMILQRFEFELAPSYTHAPHTVITMHPMHGAPLKLRAI

Transcript Sequence

Transcript ID

EES01116
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:56680107:56683387:1 gene:SORBI_3003G228600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACACCCAACCCTCCTGGGCGAAGCACCTTGGCCGCTCGAAGGTATCCCCTCCTCAACAAG
GTCAGCCACGGGGCCTTCAGAGACATTCGACACCTGCACGCCGACTGCAACCTGCAACAT
TGGCGTACTCTGGAGCTCAATTTCAGCGCACTCCACCCACCAGTCCTCGGACAGCGTTGG
TGTAGTAGAGGGCTGCGTGCATCTTCCGCCCGGGAGCAGAGGTGGGTCGATCACGAGACA
GCGTCCCACCAGCCCTAACTTCCCTGCAGAAGTTTCCCTGGGCACCCAAGGCGAGGGCGT
CTTGCAGATCAGAGTCCTCGGCGGCTGGGTCTTCCTTGGTGTGCAGGGATGCTGGCGGCT
CAGCCTCCCCTCCTCCAGATGTGTCGAGGCAGGGTTTCACTCAGAGTCAAGCTAAGTGCA
CTCAACAGATTTGAATTATAGCTGCAGCCCATTCAGAATCTTTAGACTCTATTCCTGTTC
TTTTTTCTCTTCCTTTTCAGTTCGCTAGCTTCAGCCCATTCAGAATCTTTAGACTCTATT
CCTGTTCTTTTTTCTCTTCCTTTTCAGTTCGCTAGCTTCGAGGGTCGTAGCTTTGTTTTT
TCTTCATGTTGTCTGTAAACTTTGTTACTTTCTAATAAAATTTCTGTAGGGGCCAAGGCC
CCTCCAGTTCTTAAAAAAAATAGGAAGATAATAAGATGGCAGTCTGACTTTGCCCTGCTT
CGAAGTCAATGCAGCCTTAGAGACAAACTCTGAGCTCATAGCAACAGCCAACAGGAGGAA
GCAGCGAGGAAAGAGCCCGTGCGCGGCCCGATCGAGCGTCATTTGCCTCCTCACCAATCC
AATGTTTCATATTCGCATCGCAATAGCTTCTCCACCAAGTACCTTTGCAGCAAGGCATGG
GCATGGGCATGGCTGACCAGATTGCCATCAGTCTCACTCTCACCTTATAATTAACAATTG
GGCACAAGAGTCCAGCCCACCTCTATTTAACCTGACCCCAAAGACCGTACCATTCCCATC
TCAAGTCAAATCCACTTGATCGCACTAGCTTACAATCACAGTCTCTTTCTTATACCACTC
TATCTATCTTCTCGTGAAAACAATGGTTCTTGAAGCGTCGTTTGCCGCTGCAGCCTCAGT
GCCATGGACCTTCCTTCTCGGTGGTCTCACGGGCCTGCTGCTCCTGTGGCAGGCCGGCCG
GCTGCTGCACCAGTTCTGGTGGCAGCCTCGGCTTCTGGAGCTTGCGCTGCGTGCACAGGG
CATCCGCGGCACGTCGTACCGCTTCCCCGCCGGCGACCTCAAGGAATACGGCCGACTTGC
CAAGGAGGCCTGGTCTAAGCCCCTGCCGCTGCGTTGCCACGACATCGCACAACGGGTGAC
GCCGTTCGTGCATCAGCTTGTCCGGGAGCACGGGAAGACGAGCATGTCTTGGTTTGGCCC
CAGCCCCAAGGTGACCATCGTCGATCCTGAGCTGGCCAGGGACGTGCTGTCCAACAAGTT
CGGCCACTTTGAGAAGCTCAAGTTCCCGGCGCTGTCCAAGATGCTGGGCGCCGGCGTGGC
GAACCACGAGGGTGAGAAATGGGTCAAGCACAGGAGGATCCTCAACTCTGCTTTCCATCT
TGAGAAGCTCAAGCGCATGCTGCCAGCGTTTTCTTCGTGCTGCGAAGAGCTGGTGAGCAG
ATGGGCGGAGTCCCTCGGCTCTGACAGTGCGTGCGAGCTGGATGTTTGGCCGGAGCTGCA
GAATCTCACTGGAGACGTCATTTCTCGCACTGCCTTCAGCAGCAGCTACCACGAAGGAAG
AAGGATTTTCCAGCTACAAGCCGAGCAAGCTTCGCTTGTCATGACGAACATTCGGAAGAT
TATGATGATTCCCGGTTACTTGTCCTTGCCAACCGCAAACAACAGAAAGATGAGCAGAAA
CAACAAAGAGGTGGAATCAATTCTGCGAGATATAATTGGGAAAAGAATTCAATCCATGAA
ACAAGGCGAGAGCACCAAAGATGACTTGCTGGGTCTATTGCTGGAGACAAACATGAGAGA
CACAGACGGGAATAATAATAGCCAACCCACCGGCACGGCGATGACGATCGAAGATGTCAT
CGAGGAGTGCAAGGTGTTCTATTTCGCGGGAATGGAGACCACAGCGGTGCTGCTCACATG
GACAATGATTGTACTCAGCATGCACCCAGAGTGGCAGGACCGTGCGCGGGAGGAGGTGAC
AGGTTTGTTTGGCAAAAACAAGCCTGAATACGAAGGCCTCAGCCGCCTCAAAACCGTGAC
CATGGTCCTTTACGAGGTTCTCCGGCTGTACCCGCCGGCCATTTCTTTCGTCCGGAGAAC
ATACAAGGAGCAGGAGATGGGCGGCATCAGGTACCCCGCTGGCGTGATCTTGGAGCTGCC
CGTGCTCCTCATCCACCACGACCCAGATATCTGGGGAAGCGACGCGCGCGAGTTCAGGCC
CGACAGATTCGCCGAGGGGATCTCCAAGGCATGCAAGGACTCGGGCGCGTTCCTCCCGTT
CGGCTGGGGGCCGCGCATCTGCATCGGCCAGAACTTCGCGCTGCTCGAGGCCAAGATGGC
GCTGTGCATGATCCTTCAGCGGTTTGAGTTTGAGCTCGCGCCGTCGTATACTCATGCGCC
GCATACCGTGATAACGATGCATCCTATGCATGGTGCGCCGCTTAAGCTCAGAGCAATATG
AGGCAGCCCGACATGATGTTCATCATAGTGGTCTTGTTATTGTAGATGTAACATTAGAAA
TCAAATACGCCTTTCCTTGTTAATGTCGGGTGTAAAAATCTTCACATGGTGTGCTTCTCA
TGTATCATTTGTGCTTTAGTAGTTTTTGTTTCTTTACTCATTATAAGGTGGTTGTATCTT
ACAAATATATGCATTTTTAC