Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES01104
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:56432441:56445883:1 gene:SORBI_3003G227100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTCCCACCGTCCCTTCGGCGGCGAAGTCCGCCTCTCCTTCCCAACCCTCCGGGAAG
AGCGAGGTGGCGGATCTGAAGCAGCAGCTGCGGCAGCTGGCCGGGAGCCGCGCTCCCGAT
GCGGACGACCAGCGCCGTGATGTCTTCAAGAGGGTGATCTCCTGCATGACAGCCGGCATC
GACGTCTCGGCCGCGTTTGGGGAGATGGTGCTCTGCTCCGCCACCTCCGACGTCGTAACC
AAGAAGATGTGCTATCTCTATGTAGGCGCCCACGCGCGCGCGCACCCGGACCTAGCCCTC
CTCACCATCAACTTCCTCCAGCGGGACTGCCGTGATCAGGACCCCACCATCCGCGGCCTC
GCGCTCCGCAGTCTCTGCTCCCTCCGTGTCCCCAACCTCGTCGAGTATCTCGTCACGCCA
CTCACGACCGGGCTGAAGGACCCCAGCGCCTACGTCCGGATGATCGCTGCTGTTGGTGCT
GCCAAGTTGTATCACATTTCTGCCACCGCCTGCATTGATGCTGACCTTCCTGCTTCGCTC
AAGGCGCTCATGCTCTCTGATCCAGACGCACAGGTAGTTGCCAATTGCCTACATGCATTG
CAGGAGATCTGGACCCTAGAAGCTGCTAACTCAGAGGCAGCAGCAAGAGAGATTGAGACA
TTGTATAGCAAGCCAGTGGTATTTTACCTGTTAAACAAGATCAAAGAGTTCAGTGAATGG
GCACAGTGCATTGTTCTTGAGTTGGCATCAAAGTTCCTTCCATCTGATAATAATGAAATA
TTTGACATAATGAATCTGCTGGAGGATAGACTTCAGCATGCAAATGGAGCTGTTGTTCTG
GCAACAATTAAAGTTTTTCTCCATTTGACAATGTCTATGACTGATGTCCATCAACAGGTT
TACGAACGTATCAAAGCACCCTTGCTTACTCTGGTGGGTGCTGGCAGTCCTGAACAGTCA
TACTCTGTGCTATGCCATCTACATCTTCTGGTGATGCGTGCTCCAATGTTATTTTCCTCG
GACTATAAAAGCTTCTACTGCCAATTTAGTGATCCTTCGTATGTGAAGAAGTTGAAACTT
GAGATGTTGACTGCTATAGCAAATGAAAGCAACACATATGAGATTGTCACTGAACTATGT
GAATACGCTGGAAATGTTGATGTACCAATTGCAAGAGAGTCTATCCGGGCAGTTGGAAAA
ATAGCACTACAGCAGTATGATGTTAATGCTATTGTGGACAGGCTTCTACAATTTCTTGAA
ATGGATAAGGATTATGTGACTGCTGAAACTCTAGTCTTGGTGAAAGATCTTCTCAGAAAA
TATCCTCAATGGAGCCATGATTGTATAGCTGTTGTTGGAAATATCAGCAGCAAAAACATT
CAGGAGCCAAAAGGAAAAGCAGCTCTCATATGGATGTTGGGAGAATATTCACAAGACATG
CATGATGCTCCATACATCCTTGAAAGTCTTGTTGAAAACTGGGATGAAGAGCACTCTCCT
GAGGTTCGCTTGCATCTCCTGACAGCAGTGATGAAATGTTTCTTTAAAAGACCTCCAGAG
ACACAAAAGGCACTAGGAGCTACACTAGCAGCTGGTCTATCTGACACCCACCAGGATGTT
CATGACAGAGCGCTTTTCTACTACAGGCTTTTGCAATACAATCCTAATGTAGCAGAACGT
GTAGTAAACCCTCCCAAACAAGCTGTCTCTGTATTTGCAGATACACAGAGCAGTGAAATC
AAAGATCGGATATTTGATGAGTTCAACAGTCTATCAGTTGTATATCAGAAGCCATCGTAC
ATGTTTACAGATAAGGAACATCGTGGACCATTTGAGTACTCAGAGGATCTGACAAGCTTG
ACTGTTGGGGCAGAGGATCCAGAAAATGTAATTTCTGCCCAAAGATATCAAGAAAATGAC
AATGATCTTTTGCTAAGTACTTCAGATAAAGAGGACAATGGTACAAGAGCCAGCAATGGT
TCTTCCACCTCTACATACAATGCTCCTTCCGATTTGATTAGCCCTTCATTGATAGGCTCT
CAAACACCAGCTGAAACTTCACTAATTAATACTGGTGGGCCGACACATTCCTCACAATCA
AACTTTAGTCTCGATGACCTTCTTGGCCTTGGCGTGACTGAAGCTCCTGCTCCACCACCA
CCAGCACTGACCCTTAACTCGAAGCCTGTGCTAGATCCTGGTACATTCCAGAGGAAATGG
GGCCAGCTGGCATTGGCACTGTCTCAGGAATGTTCTTTGAGTCCACAAGGAGCAGCAGCT
TTGATGAATCCCCAATCACTCATCCGTCATATGCAAAGCAATTACATCCAATGTATTGCT
TCAGGTGGTCAGCCTCCGAACTACAAGTTCTTTTTCTATGCCCAGAAAGATGGGGCTACT
GCTTTCTTCCTTGTTGAATGTATTGTGAACACAGCATCAGCGAAGGCGCAGCTCAAAATT
AAGGCTGATGATGGGGCTGCTGTTGAGGCATTCTCGACTTTGTTTCAGTCAGCCTTGTCC
AAATTTGGGCTTTCTTGA

Peptide Sequence

PEP ID

EES01104
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:56432441:56445883:1 gene:SORBI_3003G227100 transcript:EES01104 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAPTVPSAAKSASPSQPSGKSEVADLKQQLRQLAGSRAPDADDQRRDVFKRVISCMTAGI
DVSAAFGEMVLCSATSDVVTKKMCYLYVGAHARAHPDLALLTINFLQRDCRDQDPTIRGL
ALRSLCSLRVPNLVEYLVTPLTTGLKDPSAYVRMIAAVGAAKLYHISATACIDADLPASL
KALMLSDPDAQVVANCLHALQEIWTLEAANSEAAAREIETLYSKPVVFYLLNKIKEFSEW
AQCIVLELASKFLPSDNNEIFDIMNLLEDRLQHANGAVVLATIKVFLHLTMSMTDVHQQV
YERIKAPLLTLVGAGSPEQSYSVLCHLHLLVMRAPMLFSSDYKSFYCQFSDPSYVKKLKL
EMLTAIANESNTYEIVTELCEYAGNVDVPIARESIRAVGKIALQQYDVNAIVDRLLQFLE
MDKDYVTAETLVLVKDLLRKYPQWSHDCIAVVGNISSKNIQEPKGKAALIWMLGEYSQDM
HDAPYILESLVENWDEEHSPEVRLHLLTAVMKCFFKRPPETQKALGATLAAGLSDTHQDV
HDRALFYYRLLQYNPNVAERVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSVVYQKPSY
MFTDKEHRGPFEYSEDLTSLTVGAEDPENVISAQRYQENDNDLLLSTSDKEDNGTRASNG
SSTSTYNAPSDLISPSLIGSQTPAETSLINTGGPTHSSQSNFSLDDLLGLGVTEAPAPPP
PALTLNSKPVLDPGTFQRKWGQLALALSQECSLSPQGAAALMNPQSLIRHMQSNYIQCIA
SGGQPPNYKFFFYAQKDGATAFFLVECIVNTASAKAQLKIKADDGAAVEAFSTLFQSALS
KFGLS

Transcript Sequence

Transcript ID

EES01104
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:56432441:56445883:1 gene:SORBI_3003G227100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGATCCAAGCTCTTTACCCAAGCAACACCACGGCTCGTCGCAGTCGTCTTCCTCCCCACG
CGAGGCCAGATCCAACCCGCCGCGGCCGACCACCGACATGGCTCCCACCGTCCCTTCGGC
GGCGAAGTCCGCCTCTCCTTCCCAACCCTCCGGGAAGAGCGAGGTGGCGGATCTGAAGCA
GCAGCTGCGGCAGCTGGCCGGGAGCCGCGCTCCCGATGCGGACGACCAGCGCCGTGATGT
CTTCAAGAGGGTGATCTCCTGCATGACAGCCGGCATCGACGTCTCGGCCGCGTTTGGGGA
GATGGTGCTCTGCTCCGCCACCTCCGACGTCGTAACCAAGAAGATGTGCTATCTCTATGT
AGGCGCCCACGCGCGCGCGCACCCGGACCTAGCCCTCCTCACCATCAACTTCCTCCAGCG
GGACTGCCGTGATCAGGACCCCACCATCCGCGGCCTCGCGCTCCGCAGTCTCTGCTCCCT
CCGTGTCCCCAACCTCGTCGAGTATCTCGTCACGCCACTCACGACCGGGCTGAAGGACCC
CAGCGCCTACGTCCGGATGATCGCTGCTGTTGGTGCTGCCAAGTTGTATCACATTTCTGC
CACCGCCTGCATTGATGCTGACCTTCCTGCTTCGCTCAAGGCGCTCATGCTCTCTGATCC
AGACGCACAGGTAGTTGCCAATTGCCTACATGCATTGCAGGAGATCTGGACCCTAGAAGC
TGCTAACTCAGAGGCAGCAGCAAGAGAGATTGAGACATTGTATAGCAAGCCAGTGGTATT
TTACCTGTTAAACAAGATCAAAGAGTTCAGTGAATGGGCACAGTGCATTGTTCTTGAGTT
GGCATCAAAGTTCCTTCCATCTGATAATAATGAAATATTTGACATAATGAATCTGCTGGA
GGATAGACTTCAGCATGCAAATGGAGCTGTTGTTCTGGCAACAATTAAAGTTTTTCTCCA
TTTGACAATGTCTATGACTGATGTCCATCAACAGGTTTACGAACGTATCAAAGCACCCTT
GCTTACTCTGGTGGGTGCTGGCAGTCCTGAACAGTCATACTCTGTGCTATGCCATCTACA
TCTTCTGGTGATGCGTGCTCCAATGTTATTTTCCTCGGACTATAAAAGCTTCTACTGCCA
ATTTAGTGATCCTTCGTATGTGAAGAAGTTGAAACTTGAGATGTTGACTGCTATAGCAAA
TGAAAGCAACACATATGAGATTGTCACTGAACTATGTGAATACGCTGGAAATGTTGATGT
ACCAATTGCAAGAGAGTCTATCCGGGCAGTTGGAAAAATAGCACTACAGCAGTATGATGT
TAATGCTATTGTGGACAGGCTTCTACAATTTCTTGAAATGGATAAGGATTATGTGACTGC
TGAAACTCTAGTCTTGGTGAAAGATCTTCTCAGAAAATATCCTCAATGGAGCCATGATTG
TATAGCTGTTGTTGGAAATATCAGCAGCAAAAACATTCAGGAGCCAAAAGGAAAAGCAGC
TCTCATATGGATGTTGGGAGAATATTCACAAGACATGCATGATGCTCCATACATCCTTGA
AAGTCTTGTTGAAAACTGGGATGAAGAGCACTCTCCTGAGGTTCGCTTGCATCTCCTGAC
AGCAGTGATGAAATGTTTCTTTAAAAGACCTCCAGAGACACAAAAGGCACTAGGAGCTAC
ACTAGCAGCTGGTCTATCTGACACCCACCAGGATGTTCATGACAGAGCGCTTTTCTACTA
CAGGCTTTTGCAATACAATCCTAATGTAGCAGAACGTGTAGTAAACCCTCCCAAACAAGC
TGTCTCTGTATTTGCAGATACACAGAGCAGTGAAATCAAAGATCGGATATTTGATGAGTT
CAACAGTCTATCAGTTGTATATCAGAAGCCATCGTACATGTTTACAGATAAGGAACATCG
TGGACCATTTGAGTACTCAGAGGATCTGACAAGCTTGACTGTTGGGGCAGAGGATCCAGA
AAATGTAATTTCTGCCCAAAGATATCAAGAAAATGACAATGATCTTTTGCTAAGTACTTC
AGATAAAGAGGACAATGGTACAAGAGCCAGCAATGGTTCTTCCACCTCTACATACAATGC
TCCTTCCGATTTGATTAGCCCTTCATTGATAGGCTCTCAAACACCAGCTGAAACTTCACT
AATTAATACTGGTGGGCCGACACATTCCTCACAATCAAACTTTAGTCTCGATGACCTTCT
TGGCCTTGGCGTGACTGAAGCTCCTGCTCCACCACCACCAGCACTGACCCTTAACTCGAA
GCCTGTGCTAGATCCTGGTACATTCCAGAGGAAATGGGGCCAGCTGGCATTGGCACTGTC
TCAGGAATGTTCTTTGAGTCCACAAGGAGCAGCAGCTTTGATGAATCCCCAATCACTCAT
CCGTCATATGCAAAGCAATTACATCCAATGTATTGCTTCAGGTGGTCAGCCTCCGAACTA
CAAGTTCTTTTTCTATGCCCAGAAAGATGGGGCTACTGCTTTCTTCCTTGTTGAATGTAT
TGTGAACACAGCATCAGCGAAGGCGCAGCTCAAAATTAAGGCTGATGATGGGGCTGCTGT
TGAGGCATTCTCGACTTTGTTTCAGTCAGCCTTGTCCAAATTTGGGCTTTCTTGATCCTG
AGTATTTTGTCTGAGCGATTCAGTGGTCCACTGTTTTTTTCTGGCTTTCACAGTTTGCCC
CCACTCTGCTCCCTAAGCTTGTCCAGTACTTGATCAAACTATTGGAGAAATCAGAGTAGA
AGGTGCAATTCGAGGGCATAGCAATATATTATTATTACTAGATTCAGCAAGAGAGCTCTG
GAGTTCTGCGGAGGAAAATCTTATTTGTATTATTTGGGTGACTGTGCATCTGTACATGAC
TACATGTCACCCAGATAAATAGCTGGGTTATTTAGGATTGTACTAGTTTTGATGTCTTGA
TCTCTTCTGGAGGGCCTTCTTTTTCTTTAAGGTTGTAGAAACAACACACAACACCCCCTT
CCATGTATTCTATTTACCGTTATTTCTTGCACAGATGATCAATACAGATGTTTCTTCCAT
TTTGATAAACAA