Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES01082
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:55866729:55870422:1 gene:SORBI_3003G222600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCAGCGGCGACCTCCTCCTCCTCCGCGCCCACGCCGGCGCCCCGGTCCTAGCGAGG
GCCTTCGCCGGCCGCCTCCTGGTCCCGGCGAGGCGCCGCTGCGGGCTCGTCTCGCCTCTG
GCCGCCGCTTCCAAGGTCGGCATCGCCGACGTTGTTGGAGTTGGACGACGGGTCAGGCCG
GGCGGCGCCGACCAGAAGAGGCGGCGCAGGGACGCGGAGGAGGGGTTCGGGTTCTCCGGG
GTGGCCACGAGGAGGGAACTTGTCGACGACGAGGAGGACGAGGAAGATGAGGCTCTTAAG
TTGGGAGTGGAGAAGAATGGTGGCGAGACGGGAGGTGTGGATGGCTCCTACCTCAGTGAG
ACACGGTTTGATCAATGTGCTATTTCCCCTTTATCGTTGAAAGCTGTCAAAGATGCTGGA
TATGAAAGGATGACTGAGGTGCAGGCGGCAACTCTGCCCATAATTCTTCAAGGCAAGGAT
GTTCTTGCAAAGGCAAAGACAGGAACTGGGAAAACAGTTGCTTTTTTGCTTCCAGCGATT
GAGGTTCTCTCCACTCTACCTCGTGAGCGGAATCAGTTACGGCCACCTATAAATTTGCTG
GTGATGTGCCCTACTAGGGAGCTTGCGAACCAAGTGGCTGTTGAGGCCAGGAAGCTTCTC
AGGTATCATCGCTCGTTGGGTGTGCAGGTTGTAATTGGTGGCACACGATTAACTCAAGAA
CAACGAAGCATGCAAGCTAACCCATGTCAGATTCTTGTTGCTACACCAGGAAGGCTGAAG
GATCATCTTGAGAACACACCTGGGTTTTCTAGCAGGCTCAAGGGTGTGAAGGTTCTTGTT
CTTGATGAAGCTGATCGCCTGTTGGATATGGGATTTAGAAGAGATATTGAGAAAATAATT
GCTTCAATTCCTAGAGAACGGCAAACACTGTTGTTTTCTGCTACTGTTCCAGAAGAGGTC
CGCCAAATTTCTCATGTGGCAATGAAGAAAGATTATAGGTTCGTTAACACTGTTAAAGAG
GGTGATGAGGAGACACATGCACAGGTGAGCCAGATGTACATGGTTGCACCACTGGACTTG
CATTTTTCTATCCTATATGATGTATTGAAGAAGCACGTCGCAGAAGATGCAGACTACAAA
GTTATTATATTCTGTACTACTGCAATGGTCACCAAACTTGTGGCTGAAGTTCTCTCCCAG
CTGAAACTGAATATAAGAGAGATCCATTCCAGAAAGTCACAGTCTGCAAGAACCAAGGTC
TCAGATGAATTCAGGAAATCAAAAGGTTTGATACTGGTCAGTTCGGACGTATCTGCCCGC
GGTGTTGACTATCCTGATGTCACTCTTGTAATACAGGTTGGAATTCCTGCAGATAGAGAA
CAGTACATACATAGACTAGGCCGGACTGGACGGAAAGGCAAGGAAGGGCAAGGACTCCTA
CTATTGGCACCTTGGGAAAAATATTTTCTTGGTACTGTTAAGGATTTGTCAATAGCAGAG
TCTGCAGTACCTCCAGTTGATTCTAGTGTTGAGACAGAAGTCAAAAACGCGGTCAGAAAA
GTAGAGATGAAGAGCAAAGAATGTGCCTATCAAGCATGGTTAGGGTACTACAACTCAAAC
AAGACCATTGGTCGAGACAAGTCCAGACTTGCTCACCTTGCAGAAGAGTTCAGCCAAAGC
ATGGGTCTGGCTGTTCCTCCAGCCATACCTAGAAACATTCTTCGCAAGATGGGTCTTAAC
AATGTCCCTGGGCTTCGCTCATCATAA

Peptide Sequence

PEP ID

EES01082
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:55866729:55870422:1 gene:SORBI_3003G222600 transcript:EES01082 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASGDLLLLRAHAGAPVLARAFAGRLLVPARRRCGLVSPLAAASKVGIADVVGVGRRVRP
GGADQKRRRRDAEEGFGFSGVATRRELVDDEEDEEDEALKLGVEKNGGETGGVDGSYLSE
TRFDQCAISPLSLKAVKDAGYERMTEVQAATLPIILQGKDVLAKAKTGTGKTVAFLLPAI
EVLSTLPRERNQLRPPINLLVMCPTRELANQVAVEARKLLRYHRSLGVQVVIGGTRLTQE
QRSMQANPCQILVATPGRLKDHLENTPGFSSRLKGVKVLVLDEADRLLDMGFRRDIEKII
ASIPRERQTLLFSATVPEEVRQISHVAMKKDYRFVNTVKEGDEETHAQVSQMYMVAPLDL
HFSILYDVLKKHVAEDADYKVIIFCTTAMVTKLVAEVLSQLKLNIREIHSRKSQSARTKV
SDEFRKSKGLILVSSDVSARGVDYPDVTLVIQVGIPADREQYIHRLGRTGRKGKEGQGLL
LLAPWEKYFLGTVKDLSIAESAVPPVDSSVETEVKNAVRKVEMKSKECAYQAWLGYYNSN
KTIGRDKSRLAHLAEEFSQSMGLAVPPAIPRNILRKMGLNNVPGLRSS

Transcript Sequence

Transcript ID

EES01082
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:55866729:55870422:1 gene:SORBI_3003G222600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCGCGTCTGGAAATGCTTTAAAAGCTTCGCCCTGGAAATATCTTATCTTCTCGTCGCCGC
GCGCCAAAGCCGCCGCAGCAAGCCCAAGAACCCCGTGTCCTCACCTCACAAAAACCCTGC
TTGCTTGCCGGAGATGGCCAGCGGCGACCTCCTCCTCCTCCGCGCCCACGCCGGCGCCCC
GGTCCTAGCGAGGGCCTTCGCCGGCCGCCTCCTGGTCCCGGCGAGGCGCCGCTGCGGGCT
CGTCTCGCCTCTGGCCGCCGCTTCCAAGGTCGGCATCGCCGACGTTGTTGGAGTTGGACG
ACGGGTCAGGCCGGGCGGCGCCGACCAGAAGAGGCGGCGCAGGGACGCGGAGGAGGGGTT
CGGGTTCTCCGGGGTGGCCACGAGGAGGGAACTTGTCGACGACGAGGAGGACGAGGAAGA
TGAGGCTCTTAAGTTGGGAGTGGAGAAGAATGGTGGCGAGACGGGAGGTGTGGATGGCTC
CTACCTCAGTGAGACACGGTTTGATCAATGTGCTATTTCCCCTTTATCGTTGAAAGCTGT
CAAAGATGCTGGATATGAAAGGATGACTGAGGTGCAGGCGGCAACTCTGCCCATAATTCT
TCAAGGCAAGGATGTTCTTGCAAAGGCAAAGACAGGAACTGGGAAAACAGTTGCTTTTTT
GCTTCCAGCGATTGAGGTTCTCTCCACTCTACCTCGTGAGCGGAATCAGTTACGGCCACC
TATAAATTTGCTGGTGATGTGCCCTACTAGGGAGCTTGCGAACCAAGTGGCTGTTGAGGC
CAGGAAGCTTCTCAGGTATCATCGCTCGTTGGGTGTGCAGGTTGTAATTGGTGGCACACG
ATTAACTCAAGAACAACGAAGCATGCAAGCTAACCCATGTCAGATTCTTGTTGCTACACC
AGGAAGGCTGAAGGATCATCTTGAGAACACACCTGGGTTTTCTAGCAGGCTCAAGGGTGT
GAAGGTTCTTGTTCTTGATGAAGCTGATCGCCTGTTGGATATGGGATTTAGAAGAGATAT
TGAGAAAATAATTGCTTCAATTCCTAGAGAACGGCAAACACTGTTGTTTTCTGCTACTGT
TCCAGAAGAGGTCCGCCAAATTTCTCATGTGGCAATGAAGAAAGATTATAGGTTCGTTAA
CACTGTTAAAGAGGGTGATGAGGAGACACATGCACAGGTGAGCCAGATGTACATGGTTGC
ACCACTGGACTTGCATTTTTCTATCCTATATGATGTATTGAAGAAGCACGTCGCAGAAGA
TGCAGACTACAAAGTTATTATATTCTGTACTACTGCAATGGTCACCAAACTTGTGGCTGA
AGTTCTCTCCCAGCTGAAACTGAATATAAGAGAGATCCATTCCAGAAAGTCACAGTCTGC
AAGAACCAAGGTCTCAGATGAATTCAGGAAATCAAAAGGTTTGATACTGGTCAGTTCGGA
CGTATCTGCCCGCGGTGTTGACTATCCTGATGTCACTCTTGTAATACAGGTTGGAATTCC
TGCAGATAGAGAACAGTACATACATAGACTAGGCCGGACTGGACGGAAAGGCAAGGAAGG
GCAAGGACTCCTACTATTGGCACCTTGGGAAAAATATTTTCTTGGTACTGTTAAGGATTT
GTCAATAGCAGAGTCTGCAGTACCTCCAGTTGATTCTAGTGTTGAGACAGAAGTCAAAAA
CGCGGTCAGAAAAGTAGAGATGAAGAGCAAAGAATGTGCCTATCAAGCATGGTTAGGGTA
CTACAACTCAAACAAGACCATTGGTCGAGACAAGTCCAGACTTGCTCACCTTGCAGAAGA
GTTCAGCCAAAGCATGGGTCTGGCTGTTCCTCCAGCCATACCTAGAAACATTCTTCGCAA
GATGGGTCTTAACAATGTCCCTGGGCTTCGCTCATCATAATCCTGATGCTGTGATATCAA
GCAGGAGACTTGTGCTAGTGCACAATACAGTCATTTGACCATCCATAATGCTGTTAACTT
CGTAAACAGTATGCTCTAGGCTGCTGGACTTAAGGAAGCAGATTGGTTTGCTGAAGGTCT
GAAGTTTCTACAAGCATTTTCACTTCCAATCCGTTCACAAGTCCACGGCTGTAGCCAGAC
GTGTGCATTCATTTTGAAGCCAAATTTTGTTCGGTCGAAGCATCCACGCTTAACAGAGAA
TGCTCAAACACAGTTCGTATACAAGGATTTGTCACAAGGATAGTGATTAGTTTGAAATAT
TTAAATGTACTGCTTCTGAACCTTTTTGCAATAGGTTCTTGCACATTGAGACAAGCCATG
CATGGGTAGTGTTTGCTCATCATACGTCTGTACCACAGTGCACCATATAGTTTAGCGTCA
TGGAGATAGTAGTCCATGTTGCAATACCACATCCACGTGGAATGATTATCGTTACTCTTA
TTCTTCTC