Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00974
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:52787083:52798159:1 gene:SORBI_3003G200200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTTCTGGCGCATGACCGGCCTCTCCGCGGCCTCGCCCGTGGATACAATTCTGGACAAA
GAAAATTTTACATTGGAAGAACTTCTTGACGAGGATGAAATTATTCAGGAGTGCAAAGCA
CTGAACTCGCGACTCATAAACTTCTTACGTGACAAGGCCCAGGTGGAACAGTTGCTTCGT
TATGTTGTGGAAGAAGTTCCAGAGGATGCTGAAAGGAAGCGCTCTTTCAAGTTCCCTTTT
ATTGCTTGCGAAATATTTACTTGCGAAATCGATGTCATTTTGAGGACCCTAGTAGAGGAT
GAAGAGCTAATGGACTTGCTTTTCTCATTTGTGAAACCTGATCATCCGCATAGTACATTA
TTGTCTGGTTACTTCAGTAAGGTGGTAATATGTTTGATGCTGCGGAAGACTGCTCCACTT
ATGAGTTATGTTCAGGGGCATCCAGAGATAGTTGTCCAGCTTGTTGACCTGATTGGCATC
ACATCGATCATGGAGGTGCTGATACGACTGATTGGTGCTGATGAGGCCATATATTCAAAC
TATGGTGATACGTTACAGTGGTTAGAAAATACAGATGTCCTTGAAATGATTGCAGATAAG
TTTAGCTCATCGGATTCTCCTGAAGTTCATGCCAATGCTGCGGAAATTCTATGTGCAGTT
ACTCGGTGTGCACCTCCATCTCTTGCTGCGAAAATATGCAGTCCAAGTTTTGTTGGGAGG
TTGTTCCATCATGCTCTTGAAGAATCAAGACCCAAATCTGTTCTGGTTCATTCACTGTCA
GTGTGCATATCTTTGCTGGATCCGAAAAGACTAGCATCAGCTTCGTATCAAGCATTCAGA
AGCAACTTAACTCATGGGGCATTGGTCACGGCCAGTCCAGAGACAGTTGACGGTATGCTT
GAGAGTCTAGGCAACTTGCTGAAGTTATTGGACACTTCGGCTGCTGAAAGCGTGTTGCCA
ACAACTTATGGATGTTTACGCCCACCTCTTGGGAAACATCGTCTGAAGATTGTAGAATTC
ATCTCTGTGCTGCTTACAATTGGAAGTGAGACTGCTGAAAAAGAGCTAATTAGGCAGTCA
GCAATAAAGCGCTCGATTGATTTATTCTTTGAGTATCCATATAACAACTTTTTGCACCAT
CATGTTGAGAATATAATCGTTTCTTGCCTTGAGGGTAAAAGACCTGAAGTTGTTGATCAT
GTTCTTCATGAATGTGATATTGTTGGTAAAATTCTTGTTTCAGAAAGGCTTTCATCTTTG
TCGATTGAGTCTAATGGGCCTACTGTTCCCTCTGAAGGGAAAACACCTCCAAGAATTGGA
AATGTTGGTCACATGACGAGAATAGCCAATAAGCTTATTCAGTTGGGCAACAGTAACAAC
ACAATCCAGGCTCACTTATGGGAAAATAATGAGTGGGTTGAATGGCAAACAAATGTGCTG
GTCAAACGCAATGAAGTGGAGAATGTTTATCATTGGGCTTGTGGGCGCCCGACATCATTA
CATGACCGTGGTAGGGACAGTGATGATGATGACTTCCGGGACAGGGATTACGATGTGGCA
GCTCTTGCTAATAATTTAAGTCAGGCATTTCGTTATGGGATATACAGCAATGATGACATT
GAAGAGGCACAAGGATCACTTGAACGAGATGATGAGGATGTGTATTTTGATGATGAATCA
GCTGAGGTGGTGATATCTTCTTTGCGACTGGGAGATGACCAGGACGGCTCCCTCTTTACA
AATTCAAACTGGTTCACATTTGATGGAGAGAGAGGCATTGATGACCGTACATCTGCCTCT
GTTCCTTCATCATCACCCAATTCTGAGGAGATTTCACCAGAGACCGAGGAAGCTGATGAT
GGTAAAGTAATTGGCACTGAGGATGAAATGGAAACAGTATATCTTGGAAATGGTAGTGCT
GAGGAGGTAAAAGATGTAGCAGAATGTACTGAACAGGCAAACTGTTGTACTGAGGATGAG
CGATTGAAAAATACAGAAGGGATGGAGCGGCATCCAGATGCTTCAAATAATGATACCGAC
ATATGCACAAATGAGGCTGCCTCTGCTGCAGCAGAATCTTCAGCCCCATCGGTTGAGAAA
GCGGCAGAAAAAACAGTAGATGAACCATTGGAGGCAGAAAGAACAGTGGATGAACCGGCA
GAATCATCTTTGGACAGTTCTGTCTCTGTAGCTTTGCCAGCTCCTGTTAATGGTAGTGAG
CCTGCCAACTCGGAAGCTTCTTCCGAACAAGTTGCCCATGACACTGATGTGCAGCAACCA
GTCAAGGAAGCCCCTGCCGAGGATGTTGATGCAAAGAAAACTGATGGAGCCAAAGCAAGC
GAGTGA

Peptide Sequence

PEP ID

EES00974
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:52787083:52798159:1 gene:SORBI_3003G200200 transcript:EES00974 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MFWRMTGLSAASPVDTILDKENFTLEELLDEDEIIQECKALNSRLINFLRDKAQVEQLLR
YVVEEVPEDAERKRSFKFPFIACEIFTCEIDVILRTLVEDEELMDLLFSFVKPDHPHSTL
LSGYFSKVVICLMLRKTAPLMSYVQGHPEIVVQLVDLIGITSIMEVLIRLIGADEAIYSN
YGDTLQWLENTDVLEMIADKFSSSDSPEVHANAAEILCAVTRCAPPSLAAKICSPSFVGR
LFHHALEESRPKSVLVHSLSVCISLLDPKRLASASYQAFRSNLTHGALVTASPETVDGML
ESLGNLLKLLDTSAAESVLPTTYGCLRPPLGKHRLKIVEFISVLLTIGSETAEKELIRQS
AIKRSIDLFFEYPYNNFLHHHVENIIVSCLEGKRPEVVDHVLHECDIVGKILVSERLSSL
SIESNGPTVPSEGKTPPRIGNVGHMTRIANKLIQLGNSNNTIQAHLWENNEWVEWQTNVL
VKRNEVENVYHWACGRPTSLHDRGRDSDDDDFRDRDYDVAALANNLSQAFRYGIYSNDDI
EEAQGSLERDDEDVYFDDESAEVVISSLRLGDDQDGSLFTNSNWFTFDGERGIDDRTSAS
VPSSSPNSEEISPETEEADDGKVIGTEDEMETVYLGNGSAEEVKDVAECTEQANCCTEDE
RLKNTEGMERHPDASNNDTDICTNEAASAAAESSAPSVEKAAEKTVDEPLEAERTVDEPA
ESSLDSSVSVALPAPVNGSEPANSEASSEQVAHDTDVQQPVKEAPAEDVDAKKTDGAKAS
E

Transcript Sequence

Transcript ID

EES00974
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:52787083:52798159:1 gene:SORBI_3003G200200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTTTTTTCATCCTCTCGTGTGTGTGCGAGCGTGCGCCTGCTTCCCCCATCTCGCGATCCC
AATTCGATCCGCTCGCCTGCTCTCCCGATCCGACCCGCCCTCCGCGGCCGGGCAATTCGG
CCGCCGCTGCTCGGATTCGCGCGGAGCCGCATCAGATTCGCGCTTCCCGGCGCCACCAAA
CCCTAGATCCGCCGCCGCTCGTCGCACCGCCGCCGCCATGTTCTGGCGCATGACCGGCCT
CTCCGCGGCCTCGCCCGTGGATACAATTCTGGACAAAGAAAATTTTACATTGGAAGAACT
TCTTGACGAGGATGAAATTATTCAGGAGTGCAAAGCACTGAACTCGCGACTCATAAACTT
CTTACGTGACAAGGCCCAGGTGGAACAGTTGCTTCGTTATGTTGTGGAAGAAGTTCCAGA
GGATGCTGAAAGGAAGCGCTCTTTCAAGTTCCCTTTTATTGCTTGCGAAATATTTACTTG
CGAAATCGATGTCATTTTGAGGACCCTAGTAGAGGATGAAGAGCTAATGGACTTGCTTTT
CTCATTTGTGAAACCTGATCATCCGCATAGTACATTATTGTCTGGTTACTTCAGTAAGGT
GGTAATATGTTTGATGCTGCGGAAGACTGCTCCACTTATGAGTTATGTTCAGGGGCATCC
AGAGATAGTTGTCCAGCTTGTTGACCTGATTGGCATCACATCGATCATGGAGGTGCTGAT
ACGACTGATTGGTGCTGATGAGGCCATATATTCAAACTATGGTGATACGTTACAGTGGTT
AGAAAATACAGATGTCCTTGAAATGATTGCAGATAAGTTTAGCTCATCGGATTCTCCTGA
AGTTCATGCCAATGCTGCGGAAATTCTATGTGCAGTTACTCGGTGTGCACCTCCATCTCT
TGCTGCGAAAATATGCAGTCCAAGTTTTGTTGGGAGGTTGTTCCATCATGCTCTTGAAGA
ATCAAGACCCAAATCTGTTCTGGTTCATTCACTGTCAGTGTGCATATCTTTGCTGGATCC
GAAAAGACTAGCATCAGCTTCGTATCAAGCATTCAGAAGCAACTTAACTCATGGGGCATT
GGTCACGGCCAGTCCAGAGACAGTTGACGGTATGCTTGAGAGTCTAGGCAACTTGCTGAA
GTTATTGGACACTTCGGCTGCTGAAAGCGTGTTGCCAACAACTTATGGATGTTTACGCCC
ACCTCTTGGGAAACATCGTCTGAAGATTGTAGAATTCATCTCTGTGCTGCTTACAATTGG
AAGTGAGACTGCTGAAAAAGAGCTAATTAGGCAGTCAGCAATAAAGCGCTCGATTGATTT
ATTCTTTGAGTATCCATATAACAACTTTTTGCACCATCATGTTGAGAATATAATCGTTTC
TTGCCTTGAGGGTAAAAGACCTGAAGTTGTTGATCATGTTCTTCATGAATGTGATATTGT
TGGTAAAATTCTTGTTTCAGAAAGGCTTTCATCTTTGTCGATTGAGTCTAATGGGCCTAC
TGTTCCCTCTGAAGGGAAAACACCTCCAAGAATTGGAAATGTTGGTCACATGACGAGAAT
AGCCAATAAGCTTATTCAGTTGGGCAACAGTAACAACACAATCCAGGCTCACTTATGGGA
AAATAATGAGTGGGTTGAATGGCAAACAAATGTGCTGGTCAAACGCAATGAAGTGGAGAA
TGTTTATCATTGGGCTTGTGGGCGCCCGACATCATTACATGACCGTGGTAGGGACAGTGA
TGATGATGACTTCCGGGACAGGGATTACGATGTGGCAGCTCTTGCTAATAATTTAAGTCA
GGCATTTCGTTATGGGATATACAGCAATGATGACATTGAAGAGGCACAAGGATCACTTGA
ACGAGATGATGAGGATGTGTATTTTGATGATGAATCAGCTGAGGTGGTGATATCTTCTTT
GCGACTGGGAGATGACCAGGACGGCTCCCTCTTTACAAATTCAAACTGGTTCACATTTGA
TGGAGAGAGAGGCATTGATGACCGTACATCTGCCTCTGTTCCTTCATCATCACCCAATTC
TGAGGAGATTTCACCAGAGACCGAGGAAGCTGATGATGGTAAAGTAATTGGCACTGAGGA
TGAAATGGAAACAGTATATCTTGGAAATGGTAGTGCTGAGGAGGTAAAAGATGTAGCAGA
ATGTACTGAACAGGCAAACTGTTGTACTGAGGATGAGCGATTGAAAAATACAGAAGGGAT
GGAGCGGCATCCAGATGCTTCAAATAATGATACCGACATATGCACAAATGAGGCTGCCTC
TGCTGCAGCAGAATCTTCAGCCCCATCGGTTGAGAAAGCGGCAGAAAAAACAGTAGATGA
ACCATTGGAGGCAGAAAGAACAGTGGATGAACCGGCAGAATCATCTTTGGACAGTTCTGT
CTCTGTAGCTTTGCCAGCTCCTGTTAATGGTAGTGAGCCTGCCAACTCGGAAGCTTCTTC
CGAACAAGTTGCCCATGACACTGATGTGCAGCAACCAGTCAAGGAAGCCCCTGCCGAGGA
TGTTGATGCAAAGAAAACTGATGGAGCCAAAGCAAGCGAGTGAATTAGCAACATGTTGGA
CTTAGCTGATCAGAGCAATTACTTGTGAACTGAAACTCTGTAGAGTGTAGCCTGGGCATT
GATCTTGCTTCATGTGTGCTCAGCTGCCACAGGATAGTCTGAAGCAAACTGCTGTACAAT
AAGCAAGTGATTGTTCTGCCATCAACCGTGGCATATCACTGTACAAATGACCACCATTGA
CTAACGCACGTAAGTCGCCTTGTCTGAAACTGGTCATTTTCTTTGAAATTCACCCTCCAG
TTCATGTGCTTTGGTGGCGGTCTTAATGGCATGGTATATGATACCTGAAAGAACATTCTT
TGGTTGGCACTGGTTTTGGCTACTTAGTCTTCTGTTGCTTTAGGTTAACTTTGGAACTGT
AATATGAGATGTGATGTTATTTCTAGTCTAGCTATTGTTGTAATTTTTTCGGACTCTACA
TGTGTCAGTTCGACTTGAACATGTTATTTTTTTATAAAGATTCGTTACTG