Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00947
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:51958602:51966197:1 gene:SORBI_3003G195500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGGGATGCGTGTTTCTCAACACAGCTAATTGATGGAGATGGGGTCTTCAACGTCTCC
GGATTGGAGAACTTCATGAAGGATGTCAGATTGGGTGAATGTGGGCTCTCCTATGCTGTT
GTATCAATAATGGGCCCGCAGAGTAGTGGGAAAAGTACACTTTTGAATCATCTTTTTGGG
ACCAATTTTAGGGAGATGGATGCCTTCAGAGGAAGGTCACAGACTACCAAAGGTATATGG
TTAGCGAAGGCCCAGAATATTGAACCGTGCACCCTTGTAATGGATTTGGAAGGAACTGAT
GGAAGAGAGAGGGGAGAGGATGACACAGCATTTGAGAAGCAAAGTGCATTGTTTGCTTTG
GCCGTTTCGGACATTGTGTTGATTAATATGTGGTGCCATGACATTGGCAGAGAACAGGCT
GCAAACAAGCCTCTTTTGAAGACTGTTTTCCAGGTCATGATGAGGTTGTTCAGTCCCCGC
AAAACAACATTGTTGTTTGTTATTCGTGACAAATCAAGGACACCCTTAGAAAATCTTGAA
CCAATTCTAAGGGAAGACATTCAGAAGATATGGGATTCTGTTCCAAAGCCCCATGCCCAT
AAAGAAACTCCACTTAGTGAATTTTTCGATGTACAAGTTGTGGCACTGTCGAGTTATGAA
GAAAAAGAAGAGTTATTCAAACAGCAGGTTTCTGATTTAAGAGATAGGTTTCAGCATTCT
ATTGCTCCTGGCGGACTTGCTGGGGATCGTCGTGGTGTTGTCCCAGCTTCAGGTTTCTCA
TTTAGTTCCCAGGAATTTTGGAAAGTCATTAAGGAGAACAAAGACCTTGATCTGCCTGCT
CATAAAGTTATGGTGGCTACTGTACGTTGTGAGGAAATTGGTAATGAGAAAGTTGCCAGT
TTTACAGCTGATGAGGAATGGCAACAATTTGAGGAGGCTGTTCAACATGACTTTGTTCCT
GGATTTGGGAAGAAGCTCAGCAGCCTTCTTGATAGATGTTTATCAGAGTATGACATGGAG
GCTATTTATTTTGATGAAGGTGTCAGAAGCTCTAAAAGACAACAACTTGAGTCTAAACTC
TTACAGCTTGTCAATCCTGCCTATCAATCTCTTCTAGGTCACTTACGGACTAGAACTTTA
GAAGCATTTAAGGAGTCCTTTGACAAGGCCCTAGAAAAGGAGGGATTTGCTGTTGCAGCT
CGCAATTGTAGTCAAACTTTCTTGGAGAAGTTTGAAAAAGGATCTGAAGATGCTGCTATT
CAACAAGTGAATTGGGACACCTCAAAAGTGAAGGATAAGCTTAGACGTGACATTGAGGCT
CATATAGCTTCAGTTCGAGCTACTAAATTATCTGAACTTTGTGCCAAATATGAGGCACAA
CTTACCAAAGCTCTGGCGGAACCAGTTGAATCTCTTCTAGATTCAGCCAGTGAAGATACG
TGGCCAGCTATTAGAAAGCTTCTTCAACGCGAGACAAAAACTGCTGTTTCAGGTCTTGAA
TCTGCTGTGTCAGCTTTTGAACTCGATGAAGCAAGTGAGAAAGAGCTGCTTGTGAAGCTG
GAGAAGCATGGAAGGAGTGTTGTTGAGTCAAAGGCAAAAGAAGAAGCTGGAAGGGTTTTG
ATCCGCATGAAGGACAGGTTCTCAACACTGTTCAGCCGAGATGCTGACTCTATGCCCAGG
GTTTGGACAGGAAAGGAGGACATAAAAGCTATAACAAAAACCGCTCGTTCAGCCTCCATG
AAGTTGCTTTCTACAATGGCTGCAATTCGGTTGGAGGAAGATGGTGATAACATTGAGAAC
ACTCTCTCCCTTGCTCTTGTTGACACCAAAAAACCTGGGACTACAGATAGGAGTATCCAA
ATTTCTGATCCACTTGCCTCCAGCTCATGGGAAACGGTTGCCGAGGAGAAGACTTTAATT
ACCCCTGTGCAGTGTAAAAATTTGTGGAGGCAGTTCAAAGCTGAAACTGAATATACAGTC
ACTCAAGCCATAGCTGCTCAGGAAGCAAATAAGAGGAACAACAACTGGCTGCCGCCTCCA
TGGGCACTTGCTGCAATGGCTATCCTTGGATTCAACGAGTTTATGACATTACTGAGGAAT
CCGCTTTACCTGTTTGCCATATTTGTGATTTATCTTGTTGGAAAAGCCATTTGGGTGCAG
TCAGAAATTGGCAGGGAATTCCAACACGGATTTCTTCCTGCCATCCTTTCACTGTCGACG
AAATTTGTTCCCACTGTAATGAACATCTTGAAGAGATTAGCCGACGCTGGTCAAGAACCT
GCAGCAGCCCCAGACAGGCAAAGAGAGCTGGAGCTCCAACCAAAATCCACCAGGAACGGT
TCATACAGCAATGTGACATCGGCAGGGTCATCCAGCGTAACGACTTCGGAGATTGGACCC
GAATATTCAAGCCCGGTGGCGCAATGA

Peptide Sequence

PEP ID

EES00947
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:51958602:51966197:1 gene:SORBI_3003G195500 transcript:EES00947 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGDACFSTQLIDGDGVFNVSGLENFMKDVRLGECGLSYAVVSIMGPQSSGKSTLLNHLFG
TNFREMDAFRGRSQTTKGIWLAKAQNIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFAL
AVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKSRTPLENLE
PILREDIQKIWDSVPKPHAHKETPLSEFFDVQVVALSSYEEKEELFKQQVSDLRDRFQHS
IAPGGLAGDRRGVVPASGFSFSSQEFWKVIKENKDLDLPAHKVMVATVRCEEIGNEKVAS
FTADEEWQQFEEAVQHDFVPGFGKKLSSLLDRCLSEYDMEAIYFDEGVRSSKRQQLESKL
LQLVNPAYQSLLGHLRTRTLEAFKESFDKALEKEGFAVAARNCSQTFLEKFEKGSEDAAI
QQVNWDTSKVKDKLRRDIEAHIASVRATKLSELCAKYEAQLTKALAEPVESLLDSASEDT
WPAIRKLLQRETKTAVSGLESAVSAFELDEASEKELLVKLEKHGRSVVESKAKEEAGRVL
IRMKDRFSTLFSRDADSMPRVWTGKEDIKAITKTARSASMKLLSTMAAIRLEEDGDNIEN
TLSLALVDTKKPGTTDRSIQISDPLASSSWETVAEEKTLITPVQCKNLWRQFKAETEYTV
TQAIAAQEANKRNNNWLPPPWALAAMAILGFNEFMTLLRNPLYLFAIFVIYLVGKAIWVQ
SEIGREFQHGFLPAILSLSTKFVPTVMNILKRLADAGQEPAAAPDRQRELELQPKSTRNG
SYSNVTSAGSSSVTTSEIGPEYSSPVAQ

Transcript Sequence

Transcript ID

EES00947
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:51958602:51966197:1 gene:SORBI_3003G195500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCCAACTTCCCAATAAAAGCGCCCACGCCTTCGTGCACCTCCGGTCTCTCCCCCTTTCCT
CCACCTTCCCCCCACCTCCGCCATCGCCGACGCCGACCCCCCACACCGGCCGCCGCGGGA
GCGCCCCGGCACCATCTCCACACGGTCCGTGTCCTTTCTCCCTCGTTCCCCAATCAGATT
GAAATTTCTCTCCTTCCTCCCGCCCGCGCCTGGCGCCTATCTATCCTGCCGCAGGTCTCC
CTGGACGCCGCCGGCGCGAGGGTGGAGATCCGCCCGGAACTTTCTCTGATTCCTGGTTCT
GTTGTCTAGGATGCCCTAGCTTGCTTGCTTGTTTTTTTTTTCCTGCGGAAACTTCTCCGC
GCTGTGAACCCTGAAATCCAAATCTCCCTTCCTGGGATGACGATGGATCGCTCGGCTTGT
TGCAGATTTGCTTGTGCGCTTTGGAGTAACCAAAAAAAATAGTAGTTTCCTTCCCCAAGA
CCATATTCTCGAGGGGTTCAGCTGAGCCCCCATGCCCTCGTGGTAACCCGCCGCTGATAG
TGTACCCTGTGCGATCTCTAGTAATAATTGCAGTATTCAGCCGTAGATGACCTAGGAGAA
GCGTAGTTAGCGCGGACATCCATCAATTTGCACACTTTGTACAGTAACATTGCTGCTCTC
CTGGTTCTACCCCCATTTAATGCTCCTGATCTCTACCGGAATTCTGAGGCATGGGCCGCA
AAACATAGATCAATCGAGTTGGTTTTTATACGGTGTACACAAGAATCTGCCAATAATTGT
TTGGTTCTGCAGTATGAAAAGCGCCTGATTATTCAGCAGTACAGCTTGATGGCATAGTCC
TTAAAAAGTCCAATATATTTCTTCTTGTGCTGATGTTATTCACTAAGGCCTCACGCTAAT
CTACCATTTTCAATTTTGTTTTGGGGGAAATGCTGGAAGGCGAATGCGGCAATCATATTG
CTTCTACTTTGGTTTTTTTCCTTTTTGATTTTGGATGTGATGGTTTATGACTCGTTCATT
TGAATCCTGCAGAGCAGAAATGGGGGATGCGTGTTTCTCAACACAGCTAATTGATGGAGA
TGGGGTCTTCAACGTCTCCGGATTGGAGAACTTCATGAAGGATGTCAGATTGGGTGAATG
TGGGCTCTCCTATGCTGTTGTATCAATAATGGGCCCGCAGAGTAGTGGGAAAAGTACACT
TTTGAATCATCTTTTTGGGACCAATTTTAGGGAGATGGATGCCTTCAGAGGAAGGTCACA
GACTACCAAAGGTATATGGTTAGCGAAGGCCCAGAATATTGAACCGTGCACCCTTGTAAT
GGATTTGGAAGGAACTGATGGAAGAGAGAGGGGAGAGGATGACACAGCATTTGAGAAGCA
AAGTGCATTGTTTGCTTTGGCCGTTTCGGACATTGTGTTGATTAATATGTGGTGCCATGA
CATTGGCAGAGAACAGGCTGCAAACAAGCCTCTTTTGAAGACTGTTTTCCAGGTCATGAT
GAGGTTGTTCAGTCCCCGCAAAACAACATTGTTGTTTGTTATTCGTGACAAATCAAGGAC
ACCCTTAGAAAATCTTGAACCAATTCTAAGGGAAGACATTCAGAAGATATGGGATTCTGT
TCCAAAGCCCCATGCCCATAAAGAAACTCCACTTAGTGAATTTTTCGATGTACAAGTTGT
GGCACTGTCGAGTTATGAAGAAAAAGAAGAGTTATTCAAACAGCAGGTTTCTGATTTAAG
AGATAGGTTTCAGCATTCTATTGCTCCTGGCGGACTTGCTGGGGATCGTCGTGGTGTTGT
CCCAGCTTCAGGTTTCTCATTTAGTTCCCAGGAATTTTGGAAAGTCATTAAGGAGAACAA
AGACCTTGATCTGCCTGCTCATAAAGTTATGGTGGCTACTGTACGTTGTGAGGAAATTGG
TAATGAGAAAGTTGCCAGTTTTACAGCTGATGAGGAATGGCAACAATTTGAGGAGGCTGT
TCAACATGACTTTGTTCCTGGATTTGGGAAGAAGCTCAGCAGCCTTCTTGATAGATGTTT
ATCAGAGTATGACATGGAGGCTATTTATTTTGATGAAGGTGTCAGAAGCTCTAAAAGACA
ACAACTTGAGTCTAAACTCTTACAGCTTGTCAATCCTGCCTATCAATCTCTTCTAGGTCA
CTTACGGACTAGAACTTTAGAAGCATTTAAGGAGTCCTTTGACAAGGCCCTAGAAAAGGA
GGGATTTGCTGTTGCAGCTCGCAATTGTAGTCAAACTTTCTTGGAGAAGTTTGAAAAAGG
ATCTGAAGATGCTGCTATTCAACAAGTGAATTGGGACACCTCAAAAGTGAAGGATAAGCT
TAGACGTGACATTGAGGCTCATATAGCTTCAGTTCGAGCTACTAAATTATCTGAACTTTG
TGCCAAATATGAGGCACAACTTACCAAAGCTCTGGCGGAACCAGTTGAATCTCTTCTAGA
TTCAGCCAGTGAAGATACGTGGCCAGCTATTAGAAAGCTTCTTCAACGCGAGACAAAAAC
TGCTGTTTCAGGTCTTGAATCTGCTGTGTCAGCTTTTGAACTCGATGAAGCAAGTGAGAA
AGAGCTGCTTGTGAAGCTGGAGAAGCATGGAAGGAGTGTTGTTGAGTCAAAGGCAAAAGA
AGAAGCTGGAAGGGTTTTGATCCGCATGAAGGACAGGTTCTCAACACTGTTCAGCCGAGA
TGCTGACTCTATGCCCAGGGTTTGGACAGGAAAGGAGGACATAAAAGCTATAACAAAAAC
CGCTCGTTCAGCCTCCATGAAGTTGCTTTCTACAATGGCTGCAATTCGGTTGGAGGAAGA
TGGTGATAACATTGAGAACACTCTCTCCCTTGCTCTTGTTGACACCAAAAAACCTGGGAC
TACAGATAGGAGTATCCAAATTTCTGATCCACTTGCCTCCAGCTCATGGGAAACGGTTGC
CGAGGAGAAGACTTTAATTACCCCTGTGCAGTGTAAAAATTTGTGGAGGCAGTTCAAAGC
TGAAACTGAATATACAGTCACTCAAGCCATAGCTGCTCAGGAAGCAAATAAGAGGAACAA
CAACTGGCTGCCGCCTCCATGGGCACTTGCTGCAATGGCTATCCTTGGATTCAACGAGTT
TATGACATTACTGAGGAATCCGCTTTACCTGTTTGCCATATTTGTGATTTATCTTGTTGG
AAAAGCCATTTGGGTGCAGTCAGAAATTGGCAGGGAATTCCAACACGGATTTCTTCCTGC
CATCCTTTCACTGTCGACGAAATTTGTTCCCACTGTAATGAACATCTTGAAGAGATTAGC
CGACGCTGGTCAAGAACCTGCAGCAGCCCCAGACAGGCAAAGAGAGCTGGAGCTCCAACC
AAAATCCACCAGGAACGGTTCATACAGCAATGTGACATCGGCAGGGTCATCCAGCGTAAC
GACTTCGGAGATTGGACCCGAATATTCAAGCCCGGTGGCGCAATGATTTGAGTGATCTTT
AGCTTTTGGCTGGATACCCACTCTAGCAGTTGAGGAAAACAGGGTGCCTCGAGAACATAG
GAAGATTGAGGTGCGTTGCAGTTTTTGTAAGCTTGCCCTTCCCAAACTGATGCAAGGTGA
TGAGATGGCACTGCCCATCACTATTATTTAAGGAATTTTTGGGCTGGGGGTTTGTTTGTA
AGAGCATTTTAGAATAACTTGTTTCATTTTTTTTTTGGTTTCTGTAACATGAATACATGA
TATATGATGGTTGTATAGAAGATCTGGCAGTCTGTGGAGCGTAGCAGTGCATTCTACACT
GCTACAGTGGGCAGTGGGTTGCATAGTCGCGAGAAGCATGTAAATGTCTTTAAACTGCCA
TCATATTGCGATGGAGTAGTATTCGTGTTCTGGAATAATACAGAGAGGAACGTGTGAGTT
TGCGAGCC