Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00944
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:51813621:51820850:1 gene:SORBI_3003G194600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTTCCACCACCAGCAGGAGTTCCTACAGGCAGAAGCTGCGGCCGCGGCAGATCGGGAG
AGCAGCATGTCCAACCTCACCTCCTCCGCCAACGCGGCGCCTGCTGCTGCTGCTGTCCCG
CCGCCGCCGGCCGCTGGCAACAACAAGCGCAAGCGGAGCCTCCCAGGCAACCCCGACCCC
GAGGCGGAGGTGGTGGCTCTTTCTCCGGCGACGCTGATGGCGACGAACCGCTTCGTGTGC
GAGATCTGCGGGAAAGGGTTCCAGCGCGACCAGAACCTGCAGCTGCACCGGCGCGGGCAC
AACCTCCCCTGGAAGCTGAAGCAGCGCGGGACGGGGAAGGAGGCGCAGCGGAAGAAGGTG
TACGTGTGCCCGGAGGCGTCGTGCGTGCACCACGACCCGGCGCGCGCGCTGGGCGACCTC
ACGGGGATCAAGAAGCACTTCTTCCGCAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAG
TGCTCCAAGAAGTACGCCGTGCACTCCGACTGGAAGGCGCACTCCAAGATCTGCGGCACC
AGGGAGTACAAGTGCGACTGCGGCACAATCTTCTCCAGGCGGGACAGCTTCATCACGCAC
CGCGCCTTCTGCGACGCGCTCACCGAGGAGAGCGCCAAGGCCATCGGCCTCAACGCCATG
GCCGCCGCGCCGGCGCCAGCGCACCTCCACCACCACCCGCTGCTCTTCTCGCCACCGCCC
GCCGCGCACGTCATGCAGCAGCAGCAGCAGGTGGACGTCGCTCTTCTCCAGGATCATCAC
CACCACCACCAGCACCAGGAGGTCATGCAGCCGCCGCCGCAGCAGCACTGCAACTACGCC
ATGAAGACGGAGATGCCGCCGTGGCCGCCGGCGATGGCCTACGACCACTCGCTGATGCTG
CCCGCAGCGCAGAGCTCGGCCACGTCCGCGCCACCGCCGCCGCAGCCGCAGCTGCCCGCG
GCCTCTGCGCACCTGTCGGCCACGGCGCTGCTGCAGAAGGCGGCGCAGATGGGCGCCACC
ATCGGCGGCGCGGGCACGGGCTACACCCAGATGGCGGGCGCCGCGACGAGCGCGCCCGGC
ACCGCCTCCAGCTTCGGCCTCGGCCTCCCGGGCCTGCAGAATGCCCATCATCATCAGCAG
CAGGATGGCGCCGGGGTCATGTCCGCCGGGCTCGCGAGGACAGCCTCCTCCCACGGCCGC
AGCGGCGAGGAAGGCGGCGCCGACGGCATGACCAGGGACTTCCTGGGCCTGCGCGCCTTC
TCCCACCGCGACATCCTCGGCCTCGCCGGCTTGGACTCCTCGTGCATGGGCGCCATCACC
GCCAACGCCAGCATGAGCTGCTACGAGCCACAGCAGCAACACGCACAGCCTCAGGCTCAT
CAGGCGCAGCAGCAGCAGCAGCAAAGCAGCAACGAACCATGGCACGGCATGGGCAGCCAT
AGCTAG

Peptide Sequence

PEP ID

EES00944
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:51813621:51820850:1 gene:SORBI_3003G194600 transcript:EES00944 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MFHHQQEFLQAEAAAAADRESSMSNLTSSANAAPAAAAVPPPPAAGNNKRKRSLPGNPDP
EAEVVALSPATLMATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRGTGKEAQRKKV
YVCPEASCVHHDPARALGDLTGIKKHFFRKHGEKKWKCDKCSKKYAVHSDWKAHSKICGT
REYKCDCGTIFSRRDSFITHRAFCDALTEESAKAIGLNAMAAAPAPAHLHHHPLLFSPPP
AAHVMQQQQQVDVALLQDHHHHHQHQEVMQPPPQQHCNYAMKTEMPPWPPAMAYDHSLML
PAAQSSATSAPPPPQPQLPAASAHLSATALLQKAAQMGATIGGAGTGYTQMAGAATSAPG
TASSFGLGLPGLQNAHHHQQQDGAGVMSAGLARTASSHGRSGEEGGADGMTRDFLGLRAF
SHRDILGLAGLDSSCMGAITANASMSCYEPQQQHAQPQAHQAQQQQQQSSNEPWHGMGSH
S

Transcript Sequence

Transcript ID

EES00944
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:51813621:51820850:1 gene:SORBI_3003G194600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTTTCCCTTCTCCGTTCCGTTCTCCCCTAAAAGCGAGCAGCTAGCGGATAGATAAAGCTG
GGGTCGGTTTTGGTGCCACTGGCTTTCCTTCTTCCCCTTTGCTGCTGACACTGTTCCTCT
TCCCTCCTCCTCCTCCTCCTGCTCCTGCTCTCTCTCCCCCTCCCCATGTCCGTCCTCCTC
GGCGGGCGGCCATGACTGCTGCAGCCATCTCTAGCCTCCCCTGCGCGCTGCCAGCTCTAG
AAAGCTAGTAGTACTCCTACTAGACAGCTGTTGCCTGCCTTCAGCTGTGCCGCCCGCCGC
TGCAGGAGAAGGAGAGAGAGAGGGAGAAGGAGAGAGAGGGGAGTGGTGTGCCTGTGCCTG
TGGCCGTGCCGTGTGATAGAAAGAATCTGCCGAATTGCTTTCCACCAGTCATTGACCACC
CAGTTACGTTTGAGTTTCCCCCCCCTCGTTTTGTCCCCCCCTCCCTGCGCTGCGCCTCCT
GTGTTGCTTGCTGTTGTTCCTCCCTCCTTGGCTGCTTGGGGGCCCTGCTCATCAAGCTCC
TCCCCAGGCCGCCTCAGCATCTCTCACATACCGCCGTGTCTGGTGCCTGCTTCTGCTTCT
GCTTCTGCTTGCCCCATCCTCCTTCATATTCTTGACGAGTTAAATGCATGCCTTTGAGCA
GATTGCACACACACATCCCTCCTCTCGATTTTATTGCCTATGCCAACCCCTTTTTCTTCA
ATAGCTAGCTAGGTAGACACATACACATATCAGTAGTGCGTGCGTGGTGTGTGTGTGTAT
ATATACACACACACACAACAGGTGCAAGATCAGGCGAAGCTGCTAGCCGCCCTTTGGAGT
TTGGAGGCTTGGACTCCCATCACCTCGATCACCTAGTATGTTCCACCACCAGCAGGAGTT
CCTACAGGCAGAAGCTGCGGCCGCGGCAGATCGGGAGAGCAGCATGTCCAACCTCACCTC
CTCCGCCAACGCGGCGCCTGCTGCTGCTGCTGTCCCGCCGCCGCCGGCCGCTGGCAACAA
CAAGCGCAAGCGGAGCCTCCCAGGCAACCCCGACCCCGAGGCGGAGGTGGTGGCTCTTTC
TCCGGCGACGCTGATGGCGACGAACCGCTTCGTGTGCGAGATCTGCGGGAAAGGGTTCCA
GCGCGACCAGAACCTGCAGCTGCACCGGCGCGGGCACAACCTCCCCTGGAAGCTGAAGCA
GCGCGGGACGGGGAAGGAGGCGCAGCGGAAGAAGGTGTACGTGTGCCCGGAGGCGTCGTG
CGTGCACCACGACCCGGCGCGCGCGCTGGGCGACCTCACGGGGATCAAGAAGCACTTCTT
CCGCAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCTCCAAGAAGTACGCCGTGCA
CTCCGACTGGAAGGCGCACTCCAAGATCTGCGGCACCAGGGAGTACAAGTGCGACTGCGG
CACAATCTTCTCCAGGCGGGACAGCTTCATCACGCACCGCGCCTTCTGCGACGCGCTCAC
CGAGGAGAGCGCCAAGGCCATCGGCCTCAACGCCATGGCCGCCGCGCCGGCGCCAGCGCA
CCTCCACCACCACCCGCTGCTCTTCTCGCCACCGCCCGCCGCGCACGTCATGCAGCAGCA
GCAGCAGGTGGACGTCGCTCTTCTCCAGGATCATCACCACCACCACCAGCACCAGGAGGT
CATGCAGCCGCCGCCGCAGCAGCACTGCAACTACGCCATGAAGACGGAGATGCCGCCGTG
GCCGCCGGCGATGGCCTACGACCACTCGCTGATGCTGCCCGCAGCGCAGAGCTCGGCCAC
GTCCGCGCCACCGCCGCCGCAGCCGCAGCTGCCCGCGGCCTCTGCGCACCTGTCGGCCAC
GGCGCTGCTGCAGAAGGCGGCGCAGATGGGCGCCACCATCGGCGGCGCGGGCACGGGCTA
CACCCAGATGGCGGGCGCCGCGACGAGCGCGCCCGGCACCGCCTCCAGCTTCGGCCTCGG
CCTCCCGGGCCTGCAGAATGCCCATCATCATCAGCAGCAGGATGGCGCCGGGGTCATGTC
CGCCGGGCTCGCGAGGACAGCCTCCTCCCACGGCCGCAGCGGCGAGGAAGGCGGCGCCGA
CGGCATGACCAGGGACTTCCTGGGCCTGCGCGCCTTCTCCCACCGCGACATCCTCGGCCT
CGCCGGCTTGGACTCCTCGTGCATGGGCGCCATCACCGCCAACGCCAGCATGAGCTGCTA
CGAGCCACAGCAGCAACACGCACAGCCTCAGGCTCATCAGGCGCAGCAGCAGCAGCAGCA
AAGCAGCAACGAACCATGGCACGGCATGGGCAGCCATAGCTAGGTCGGTCGCTAGCTACT
CTCGTCTCGCTACCCCTGCCATGGCAGCGAAGCTCGCACGCATCTGATCGCTGCCGCCGC
GGTGGGTGCAGAGGCAAAACCCCAGTGCATGCAAATGCACCGTGCCCTTTTGAGAGTCCG
GTAACACTTGCCTCATCTTTTGCTTCTGTTCATGGATACATCATCTCATCATCTTTCAAC
TCATTAACCACGCAAATGCAAGCGATCAAACGACCTTGTGGAGAGCTAGATTTCGATCAA
ACTCTAAGCTGGGTCGGATGATGATGATACAGAAGAGTACGCAGCAGGGCAGGGAGTTGT
GTAATTTTTTTTTGGGTTGGGGGAAGAGATCGATCAACATGTAAACTAGTAAGCTCGAAT
CAAGCAGCTGGGAAGAAAACCAAATAGCTATGTGACAGTAATAATACATGCATGCATTCA
TCATCTCTTTTGTTTGGGCATTGCATATTGCAATTGTGTTGTGTGAACGAACTGGAGTCC
TTGCATAGTGTAGACTGTAGTAGACCATCACCATAGACCAGTAGAGGGTGCATTCTTTCT
TGGGTCTACGAGACATGTGTGGCCTACTGGCCGTGATATAATTTTTTTCTCTTCATACTA
TTACTACTCCTACATGCTGCATGTGTGTGCCTGTCTGTGTACTGTGTCGTGCAATCAGGC
CATGTACTGGGGCAGTGCTGCCTACTGTTCACCCGTGACAAGGTTTTGTTGGTATTGGAC
CTATTGGGTCATGGGCACGCATTATTCCATGCTGGATATATATGCATGGACTGATGAGAG
CGAATATTGGAAAAGTTTGTTACAATATATTATATACACATCGTGAGTGTGCTGCCTTCT
TGCTTGCAACTTTAGGATCTGCAGTAACGAAATACTATAATATGAAGTTTTTCCCCCTTT
TTGTAACTTCTGCCTACGTGGTTTCAAGAGTCATTTTTTAATAAATTTGCTTCTTTGTTT
GCATTCTCGTGTTTCTGGGTCCTTTTACTAGTAGTTGTTTAACAGACCGAAGGCACGTTA
CGGCGAGATTTGACAAAAAAAAACATCGTTAAAAAAGGATACACTATTGCGTATTATTGC
ATTTTTAGAGATTTTATAATACATACTCCCACTTTCCGAGAAGTTATTTTTTTAACTTTG
ATCAATTATATATAAAAATATATTAATATTTATAATATATAATTAGTGTCATTAGATAGA
TCTTTGAATATATTTTTATAATAAATTTATTTGGATGTACTAACGTTGTATATATTTTTT
ATAAATTAATCAAAATTAAGAAAGTCTATATCCTATAGCGACGTTCTTTCGGACGGATGG
AGTATATGTGGGGCAACCATGATGCATTTTAGATTTTATGGTGTGCTCTTACCATGCTAC
AGCTCAGTACAAATTAAACTTAATTACCCTGCTGTGTTCACCTTCCATAGCTCTTAGAAT
TCCTACTACTAGTGTCCAAAAGAAAATCTACTGGTAGTAGCTGCGCTACACTATACGAGT
AGACCATAAACTACTATAGTGGAAATTTTACTCTTTTCTCATGGTTTAGCACATATCGGT
AATCAGAAGAAATGTTAAGAAACAGCAGATTGTAGCCAATTATTACCCTTCCTTGGTCAT
TTCACTCATTACATAACAAAAAGTATATGTACCGGATCGGATGGCAGCATGCAGTGAGAA
AAATGGGGTACGGTGACGCTGACACCATCTTTGTGGGGGATGAATATTAGATAAACTATT
TTGCTAATTTAAACAATCTGCAACTCTAGTAAAAATCTATTGCATCAAGACAAATTAGAT
GTGATAGGTATAAAAACAAAAACTTGTAACTATTTTAAACATGCATGCATGATACCAAAA
ATGGTATGATGTGTACATATAAAAGGCATAGCCATAATTTTGAAGTACTAGGCCTTGTTT
AGTTCACCCTGAAAACCAAAAAGTTTTCAAGATTTCCCGTCACATCGAATCTTATGGCAC
ATGCATGAAACATTAAATATAGATAAAAATATAAACTAATTACACAGTTTAGCTGTAAAT
CATAAGACGAATCTTTTGATCCTAGTTAGTCCATAATTAGATAATATTTGTCACAAACAA
ACGAAAATGTTACAGTACCGAAAACTTTTCACTTTTCGGAACTAAACAAGGCCTAGATCT
ACATAAACACTGACATGCACCCCTACCTGTTTTAGAGAAGAAATATTTATATTAAAACTT
GGCATAATAAATCCAAAAATTACATATGAAAGAATCTACAATAAAAAATAAAAAATAAAA
AAATCTATCACATTCTTTCGTCATCTTCTTTCCTAGTGGTTTTGGTTGATACAATCCATG
CTTCAAATGAAAAAAAAAACTCTATCGAACAGTGAACAGTCCCCAAGCTTAATCCCTCGA
CTAGGTCTAGAATGAACCAATAGTCACAAGATACAACATTCTAGAACCAAAAGGAAACAC
ATCTGGATTTGATGAAAGAATATCAATGATTGAATCACTACACACGAATAGGCTATTAGC
ACCTCCAACCCTTAATCCATTAGGTTTTGGACGCCTGATTTTCTCTCTACAATCATCGAC
CATGGGGTTGGTGACCCAAATTCTTTCATCATATATATTTTTCCCTACTGGCCTTGCTCG
AGCCCATGCTTTAAATGAACAAACCAGTTGAACAACAAATGGTTCTCATGCCGAATCCCC
CAACAAACCCCTTTTGGTATGCCATAAGATACAATGTTCGAAACACATCTAAATCGATGC
AAAAATATCGCCTGAATCATTGGGTACAATACAAGCTAGCCGCCAACACCTCTAACTCTT
GATCTATCAAGTTGGACACATGATTTCTATGTGGCCATCGACAATGAGGTTGGTGATCTA
GATTTACTATTAAGGGATCGGAGTACATTAGTACCTAATCGACTCCCCCAATGGTGATCT
TGTTGTGGCCATTGTCAACGTCATCACAAGTAACAATCTCCTGAATCACAAACATCAATG
ATAATTTTATCGATATATTTATTTAAGATAAACTTAAGCATACTAAATATAAAGAACTGC
TTGCCTGTAAATGAGGGATGTTGCCCTCTTCTTCTTGACACTGACGGTCCCACGTTGGAG
AGGAAGGAGGGGCCCCTAGCTGACAACTGCAAGCTTCGCCTTGACAGTAGCAGCTCTAGT
TACAGATATTAATACACGCATACAGACTTGATTTTAGCACTGTATCAATTACTAGATTTC
AGAGGTAATGAACTTTGATCAGGGAAAGCGAACGTGGTCAAATATATATGAACGTTTTCT
GTGGTCAATATGGGATATTGTAAGTTTGGTCCCAGAGTTACTAAAACTTGCATTATATTG
ATGCATATTGTACATATATATTTAATTCCTCAT