Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00938
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:51616474:51620984:1 gene:SORBI_3003G193500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGCCGCGCGTGGCCAACAAGTTCCGCCTCGGGCGCAAGCTCGGGAGCGGATCCTTC
GGGGAGATCTTCCTTGGTACTCACGTGCAGACCAACGAGCAGGTCGCGATTAAGCTGGAA
AATATGAAGACAAAACATCCTCAGTTGCTGTATGAGGCAAAGCTGTATAGGATACTTCAG
GGTGGAACTGGAATTCCAAACATCAAGTGGTTTGGTGTCGAGGGTGACTACAATGTTCTT
GTTATGGACCTCTTGGGTCCAAGCCTTGAAGAGCTTTTCAGCTTTTGCAACAGAAAACTG
TCCCTGAAGACAGTTTTGATGCTTGCTGATCAGTTGATCAACCGGATCGAGTATGTTCAT
ATGAAGTCCTTCTTACATCGAGATATTAAGCCAGACAATTTCCTCATGGGCCTTGGCAAG
AGAATGAATCAGGCATACGTGATTGATTTTGGATTGGCAAAGAAATACAGGGACAGTACA
AACCAGCACATTCCATACAGAGAGAACAAAAATTTGACTGGGACAGCACGATATGCAAGT
GTAAACACTCATCTCGGAATTGAACAAAGCAGGAGGGATGACATGGAATCACTTGGATAT
GTACTCATGTACTTCTTAAGAGGAAGTCTTCCTTGGCAAGGTCTAAAAGCTGGGACCAAG
AAACAGAAGTATGAGAAAATCAGTGAAAGGAAGATCGCTACTTCAGTTGAGGTTCTCTGT
CGTGGATACCCTCCTGAATTTCAACGCTACTTCCATCACTGCCGTGCGTTACGCTTTGAT
GATGCGCCTGACTATCAATACCTGAAGAAAATGTTCAGAGACCTTTTTATTCGAGAGGGA
TTTCAGTTTGATTATGTTTTTGACTGGACCATTCTTAAGTACCAGCAATCGCAAATGACC
ATTCCACCGCGTGCTATGGCTGCAGCAACGGATCAAAGCTCCAGGATGGCTTCAATGGCA
AATAATAATGGACTGTCAGCCACTGAAGAGGGAAAGAGAAGTGGGTGGTCAGATGATCCC
TTGCGACGCCAGGTTCCACCTGCAGGAATAAATGCAGGCAGCTTGGCAAAGCAGAAATCT
CCAGTTAGACAAGAAGTGTCCACATCAAAAGATGCTGTGTTCGCCAGTTCATCTATTTTG
GGTCGGTCAAGCGGATCGTTGAGGCGTCCTGCTGTTCCTAGCAGCCGAGTTCCAACGAGT
GAAGCTTTACTACGCAGTCGTACACCAGATGGAAGCCCAGGGTCTTTCCAAAGAAATGCT
CCTACACATAGGACCTCACAGACCCATGAGTACTTGGACCGCTCCGGAGTTTCGTTGTCT
GGCAGGCTCATGCCCAACACCAAGCATTATGAGTCCACTCTAAGGAGCATCCAAGGCCTA
AATGTTGATGCCAATGATAGGATCCACTACTAG

Peptide Sequence

PEP ID

EES00938
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:51616474:51620984:1 gene:SORBI_3003G193500 transcript:EES00938 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEPRVANKFRLGRKLGSGSFGEIFLGTHVQTNEQVAIKLENMKTKHPQLLYEAKLYRILQ
GGTGIPNIKWFGVEGDYNVLVMDLLGPSLEELFSFCNRKLSLKTVLMLADQLINRIEYVH
MKSFLHRDIKPDNFLMGLGKRMNQAYVIDFGLAKKYRDSTNQHIPYRENKNLTGTARYAS
VNTHLGIEQSRRDDMESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISERKIATSVEVLC
RGYPPEFQRYFHHCRALRFDDAPDYQYLKKMFRDLFIREGFQFDYVFDWTILKYQQSQMT
IPPRAMAAATDQSSRMASMANNNGLSATEEGKRSGWSDDPLRRQVPPAGINAGSLAKQKS
PVRQEVSTSKDAVFASSSILGRSSGSLRRPAVPSSRVPTSEALLRSRTPDGSPGSFQRNA
PTHRTSQTHEYLDRSGVSLSGRLMPNTKHYESTLRSIQGLNVDANDRIHY

Transcript Sequence

Transcript ID

EES00938
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:51616474:51620984:1 gene:SORBI_3003G193500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AACATAGAATTTTATTGTGTTCCTATATTTTAGCTATGAAAAATAAACTGGTTCCTATAA
AATTCCTATATGATTCCAGTAAAATTTCTACGTTTGAAAATGATACTAGAGGTTTTTTTT
TTTATTTATCAAAATCTATGGGCCTCGTGACCTCGTGGGTGCGTGCTGTCCCTTGGCCTG
CCCGGTGCGGACGGTGCATGACTCTTGCTCCTGCTCCCCTGTCGCGAAAACAAAGCACCA
CCGCCACTGACAAAAACTAGCAAAAATCCCCAATTCCGCCGCAGTCCGATCCTCCAAACC
CTAAAGCTCCCAATCCCCAACCTTTCCTACGTCTCCGGATGCCCTCTACCCGCGCGGCCT
AGGGCGGCAGCAGTCGTCTGGCAGGCGGGGACGCGCCAATGGAGCCGCGCGTGGCCAACA
AGTTCCGCCTCGGGCGCAAGCTCGGGAGCGGATCCTTCGGGGAGATCTTCCTTGGTACTC
ACGTGCAGACCAACGAGCAGGTCGCGATTAAGCTGGAAAATATGAAGACAAAACATCCTC
AGTTGCTGTATGAGGCAAAGCTGTATAGGATACTTCAGGGTGGAACTGGAATTCCAAACA
TCAAGTGGTTTGGTGTCGAGGGTGACTACAATGTTCTTGTTATGGACCTCTTGGGTCCAA
GCCTTGAAGAGCTTTTCAGCTTTTGCAACAGAAAACTGTCCCTGAAGACAGTTTTGATGC
TTGCTGATCAGTTGATCAACCGGATCGAGTATGTTCATATGAAGTCCTTCTTACATCGAG
ATATTAAGCCAGACAATTTCCTCATGGGCCTTGGCAAGAGAATGAATCAGGCATACGTGA
TTGATTTTGGATTGGCAAAGAAATACAGGGACAGTACAAACCAGCACATTCCATACAGAG
AGAACAAAAATTTGACTGGGACAGCACGATATGCAAGTGTAAACACTCATCTCGGAATTG
AACAAAGCAGGAGGGATGACATGGAATCACTTGGATATGTACTCATGTACTTCTTAAGAG
GAAGTCTTCCTTGGCAAGGTCTAAAAGCTGGGACCAAGAAACAGAAGTATGAGAAAATCA
GTGAAAGGAAGATCGCTACTTCAGTTGAGGTTCTCTGTCGTGGATACCCTCCTGAATTTC
AACGCTACTTCCATCACTGCCGTGCGTTACGCTTTGATGATGCGCCTGACTATCAATACC
TGAAGAAAATGTTCAGAGACCTTTTTATTCGAGAGGGATTTCAGTTTGATTATGTTTTTG
ACTGGACCATTCTTAAGTACCAGCAATCGCAAATGACCATTCCACCGCGTGCTATGGCTG
CAGCAACGGATCAAAGCTCCAGGATGGCTTCAATGGCAAATAATAATGGACTGTCAGCCA
CTGAAGAGGGAAAGAGAAGTGGGTGGTCAGATGATCCCTTGCGACGCCAGGTTCCACCTG
CAGGAATAAATGCAGGCAGCTTGGCAAAGCAGAAATCTCCAGTTAGACAAGAAGTGTCCA
CATCAAAAGATGCTGTGTTCGCCAGTTCATCTATTTTGGGTCGGTCAAGCGGATCGTTGA
GGCGTCCTGCTGTTCCTAGCAGCCGAGTTCCAACGAGTGAAGCTTTACTACGCAGTCGTA
CACCAGATGGAAGCCCAGGGTCTTTCCAAAGAAATGCTCCTACACATAGGACCTCACAGA
CCCATGAGTACTTGGACCGCTCCGGAGTTTCGTTGTCTGGCAGGCTCATGCCCAACACCA
AGCATTATGAGTCCACTCTAAGGAGCATCCAAGGCCTAAATGTTGATGCCAATGATAGGA
TCCACTACTAGCATCTTGTGGATCCCATGGACGTGTACAATCTATATGATATCTTGAAGT
CCAGATGAAGAGCAAGTATGTAACTTCCAAGCTACCTGCTGGAGGAGCAAGGCCACTTGT
TGACCCAGCACTGCACTCTAGTTGGCGAAATAAAGGGCTGTCTGTGTTCTGGAGCAGCTT
TTGTCTTAAGAAATGGCATCATGGCCATGTTTTAGCTCTGTACAGGTTCTGATTTGTCCA
TAATGTGCTTGTGGATTCTGGTTTAGCGTTTTCCACATATATAATCTCTCTTCTCGAGCT
GTGTCAGCTCGGTCGTGCACCGTTTGCTCCTTTCTGTATGCGTGGAATTCGTAAGTAATC
TAAGGTGATTATCATTC