Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00854
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:46818289:46826560:1 gene:SORBI_3003G179500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCACCGGCCGAGGACGCCCCACCGCAGACCCCGCCTCCCGCGCGCGGGACGGCGGCC
GGATCGCGGGTGCTGCTGCAGTCGCCGCCTCCGGCGTTCCCGCTCGGCTCCAACGACGAC
CAGCAAGAGCGCGCCCGCGCCCGCGCCGCGGCGCGTGCCGCCTCCGTCCGCCGCCGATCC
CTCGCCGCCTCCATCGCGCCCTCCAAGGATCCGCGCCACGACCTCCTCAACCGCGAGCAG
GTCATGGACCTCTTCCAAAACTGTATCAAGCTCGCATCCGAGAACAAAATTAACCAGAAG
AACACGTGGGAGCTGGGCCTAATCGACCATCTGAGCGAGATCATCCAAGCGGGGGCGGAC
GAGGACGAGGAGACCAACTTTCAGAAGGCAAGCTGCACACTGGAGGCGGGGGTCAAGATC
TATTCACTTCGTGTGGATTCGGTGCACTCTGAAGCTTACAAGGTGCTTGGCGGGATCAAC
CGTGCCGGAAGGGGTGAAGAGGCTGATTTGGATGAAGGCAGCAATGTTGCACCTGCACAG
GATGAAGGCATCAACAAAAAGGATGCTGATAGGAGGATTTCACCTGCTTCAACGTTGGAG
TCATCATTTGAGGCTCTCAATGTAAAGAAATTTGATGTTGCTTTCACGGTGGATCCTCTA
TACCATCAAACTACTGCTCAGTTTGATGAAGGTGGGGCAAAGGGCCTTTTGTTGTATAAC
CTTGGAGTTTATGGCAGCTGCCGTGTGCTGTTTGATTCATTTGAAGCTCCAGACAAATGC
ATCTTAAGTGATATGCAAACTGAGCAGGCTGAGGCAGTTGACCTTTCATTTGCTAAAGAG
CAAATTGAGGAAATGGTCACTGAAATGCGTCTATGTAATGATATTTCTCCAACCCTAAGG
GATATTGTTGCACAATTTGATGAAGAAAACCAAAGGCCATCACATAGGTTATCTCCTGGG
CAAATGCCAGTAATGGAAGATCCGATGGATGATGATAATGAAGCAGACGATAATGATAGC
ATACTACCTGATTCTGGAACTTGGGATTTTGGTGGTTGCCATGACCATGAGGATGCATAT
AATGAAAACTGCAACCCAATGGATTCCATCTCAACAAACTACCAAGAGGAATTCAATGAA
TACACTGTTGAAATTCCTCAGGGTACTATTGTAGATGAAAGGCTTGACAAAATTGCAGAT
CTTTTATTACTTGGCATGGGCTCTTCAAAAGCAAATGCTTGGGCAGGACCTGAGCACTGG
AAATATCGGAAAGCTAAAGATTTGGAAGCTGTCCCAACTTCATCTGGTGATTCAGAAATA
ACAAATAAGATGAAGAAAAGATACAAGGATAAACCTGACATTGATTTCACAAAAGCATTG
GACAATGAGCATCCAAATATCTTTTCACCTCCCAAAAATCCAAAGTCATTAGTATTGCCT
GTAAATAGGGCTATGTGCAGCAATAAACTTCCAGAAGATTGCCATTACAGGCCTGAAAGC
CTTGTGAAATTATTTCTTCTTCCAGATGTTTTGTGTCTTGCTAAGAGAAGAAGAAAATCA
CTTGACGCTCCAGTGGATAATGATGATGACTTTATCCCATCTGAACCTTGGGAAGACGAC
AACTTTTGCACTGATCATGTTGATGAAGGACATGTGTGTAGTGATGTAGAAGAGCCTGTA
AATCTTATCAATAAACCGAGACAGGTCAACAAGATTGATATACAGTATGACAAGGTATCA
AAACAAGTGGATGTTCATGCTTTAAAAGAAGTGCTCTGGAATCACATCCAAGCATCTTCT
GAGACTGATTGTCAGGAAAGAGAGGAAACTGGATCACCGCTGCACCTCTCTCAGGTGTTA
CATGACCTTCCAAGCAGCAACCCAGATGCTGTAACAACTGATATTTCGCCACACCTGTAT
TTCATCTGCCTTTTGCATCTGGCAAATGAGCACAGTTTGAAGCTGTGTGACCGCCCCACG
TTGGATGAAGTCGACATATACATGCCGACTTCACCGATTGTGAAGTAA

Peptide Sequence

PEP ID

EES00854
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:46818289:46826560:1 gene:SORBI_3003G179500 transcript:EES00854 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPPAEDAPPQTPPPARGTAAGSRVLLQSPPPAFPLGSNDDQQERARARAAARAASVRRRS
LAASIAPSKDPRHDLLNREQVMDLFQNCIKLASENKINQKNTWELGLIDHLSEIIQAGAD
EDEETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGRGEEADLDEGSNVAPAQ
DEGINKKDADRRISPASTLESSFEALNVKKFDVAFTVDPLYHQTTAQFDEGGAKGLLLYN
LGVYGSCRVLFDSFEAPDKCILSDMQTEQAEAVDLSFAKEQIEEMVTEMRLCNDISPTLR
DIVAQFDEENQRPSHRLSPGQMPVMEDPMDDDNEADDNDSILPDSGTWDFGGCHDHEDAY
NENCNPMDSISTNYQEEFNEYTVEIPQGTIVDERLDKIADLLLLGMGSSKANAWAGPEHW
KYRKAKDLEAVPTSSGDSEITNKMKKRYKDKPDIDFTKALDNEHPNIFSPPKNPKSLVLP
VNRAMCSNKLPEDCHYRPESLVKLFLLPDVLCLAKRRRKSLDAPVDNDDDFIPSEPWEDD
NFCTDHVDEGHVCSDVEEPVNLINKPRQVNKIDIQYDKVSKQVDVHALKEVLWNHIQASS
ETDCQEREETGSPLHLSQVLHDLPSSNPDAVTTDISPHLYFICLLHLANEHSLKLCDRPT
LDEVDIYMPTSPIVK

Transcript Sequence

Transcript ID

EES00854
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:46818289:46826560:1 gene:SORBI_3003G179500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AATTTTCCCCACCCAACCACTCGACTCCTGTCCCGTTCCGCTCAGCCGCCGCCGCCGCCG
TCGCCGTCGACCGCACGAGATGCCACCGGCCGAGGACGCCCCACCGCAGACCCCGCCTCC
CGCGCGCGGGACGGCGGCCGGATCGCGGGTGCTGCTGCAGTCGCCGCCTCCGGCGTTCCC
GCTCGGCTCCAACGACGACCAGCAAGAGCGCGCCCGCGCCCGCGCCGCGGCGCGTGCCGC
CTCCGTCCGCCGCCGATCCCTCGCCGCCTCCATCGCGCCCTCCAAGGATCCGCGCCACGA
CCTCCTCAACCGCGAGCAGGTCATGGACCTCTTCCAAAACTGTATCAAGCTCGCATCCGA
GAACAAAATTAACCAGAAGAACACGTGGGAGCTGGGCCTAATCGACCATCTGAGCGAGAT
CATCCAAGCGGGGGCGGACGAGGACGAGGAGACCAACTTTCAGAAGGCAAGCTGCACACT
GGAGGCGGGGGTCAAGATCTATTCACTTCGTGTGGATTCGGTGCACTCTGAAGCTTACAA
GGTGCTTGGCGGGATCAACCGTGCCGGAAGGGGTGAAGAGGCTGATTTGGATGAAGGCAG
CAATGTTGCACCTGCACAGGATGAAGGCATCAACAAAAAGGATGCTGATAGGAGGATTTC
ACCTGCTTCAACGTTGGAGTCATCATTTGAGGCTCTCAATGTAAAGAAATTTGATGTTGC
TTTCACGGTGGATCCTCTATACCATCAAACTACTGCTCAGTTTGATGAAGGTGGGGCAAA
GGGCCTTTTGTTGTATAACCTTGGAGTTTATGGCAGCTGCCGTGTGCTGTTTGATTCATT
TGAAGCTCCAGACAAATGCATCTTAAGTGATATGCAAACTGAGCAGGCTGAGGCAGTTGA
CCTTTCATTTGCTAAAGAGCAAATTGAGGAAATGGTCACTGAAATGCGTCTATGTAATGA
TATTTCTCCAACCCTAAGGGATATTGTTGCACAATTTGATGAAGAAAACCAAAGGCCATC
ACATAGGTTATCTCCTGGGCAAATGCCAGTAATGGAAGATCCGATGGATGATGATAATGA
AGCAGACGATAATGATAGCATACTACCTGATTCTGGAACTTGGGATTTTGGTGGTTGCCA
TGACCATGAGGATGCATATAATGAAAACTGCAACCCAATGGATTCCATCTCAACAAACTA
CCAAGAGGAATTCAATGAATACACTGTTGAAATTCCTCAGGGTACTATTGTAGATGAAAG
GCTTGACAAAATTGCAGATCTTTTATTACTTGGCATGGGCTCTTCAAAAGCAAATGCTTG
GGCAGGACCTGAGCACTGGAAATATCGGAAAGCTAAAGATTTGGAAGCTGTCCCAACTTC
ATCTGGTGATTCAGAAATAACAAATAAGATGAAGAAAAGATACAAGGATAAACCTGACAT
TGATTTCACAAAAGCATTGGACAATGAGCATCCAAATATCTTTTCACCTCCCAAAAATCC
AAAGTCATTAGTATTGCCTGTAAATAGGGCTATGTGCAGCAATAAACTTCCAGAAGATTG
CCATTACAGGCCTGAAAGCCTTGTGAAATTATTTCTTCTTCCAGATGTTTTGTGTCTTGC
TAAGAGAAGAAGAAAATCACTTGACGCTCCAGTGGATAATGATGATGACTTTATCCCATC
TGAACCTTGGGAAGACGACAACTTTTGCACTGATCATGTTGATGAAGGACATGTGTGTAG
TGATGTAGAAGAGCCTGTAAATCTTATCAATAAACCGAGACAGGTCAACAAGATTGATAT
ACAGTATGACAAGGTATCAAAACAAGTGGATGTTCATGCTTTAAAAGAAGTGCTCTGGAA
TCACATCCAAGCATCTTCTGAGACTGATTGTCAGGAAAGAGAGGAAACTGGATCACCGCT
GCACCTCTCTCAGGTGTTACATGACCTTCCAAGCAGCAACCCAGATGCTGTAACAACTGA
TATTTCGCCACACCTGTATTTCATCTGCCTTTTGCATCTGGCAAATGAGCACAGTTTGAA
GCTGTGTGACCGCCCCACGTTGGATGAAGTCGACATATACATGCCGACTTCACCGATTGT
GAAGTAAACCATGCTGCGGTTCAATGTGTTGTATGTGGTTTTGCCATGGAAGCCACCTGC
ATTGCATCATGTAATATATATATATATCCTCGCTGCTATTTTATTCATAACTGTCGTACC
GGGGATGCTAGGAAAGTCAAGCGGACCCGTACCCAGTAGTAGATTTCCTTAAATGAGGTT
TCTCTGATCTGTTGATGCTATTAACTTAAGCTTTTATCTTGTTTATCGATGGACTGAGAT
AAAATATTTGACAGCCTAGACTAACACATGATTAGCAGTTTCTGCTGATGGTATAGAAT