Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00688
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:16165846:16168878:1 gene:SORBI_3003G152200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGGCTGCGCGTAGCTACTTCTTCGTCGCCGCGGTTGCCGTCGTCCTTATTGCGCTT
CTCCCGGCCAGCGCCATAGCCGCCGGCCTCAAGGTCGGCTTCTACAACAAGTCATGCCCG
TCGGCGGAGGCCCTGGTGCAGCAGGCGGTGGCTGCCGCCTTCAAGAACGACAGCGGCATC
GCCGCCGGCCTCATCCGCCTGCACTTCCATGACTGCTTCGTCAGGGGCTGCGACGGCTCG
GTGCTGATCGACTCGACGGCGAACAACACGGCGGAGAAGGACGCGCCCCCGAACAACCCG
AGCCTTCGTGGCTTCGAGGTCATCGACGCCGCCAAGGCGGCGATCGAGGCGCAGTGCCCC
AAGACGGTCTCGTGCGCCGACATCCTGGCGTTCGCGGCGCGGGACAGCGTCGCGCTGTCG
TCGTCGTCGGCGTCGGGGAGCGGCAAGAACCTGACGTACAAGGTCCCCGCGGGGCGGCGC
GACGGGCGGGTGTCGAGGGACACGGACGCCAACAGCAACCTCCCCTCGCCGCTCTCCACC
GCCGCCGAGCTCGTCGGCAACTTCACGCGCAAGAACCTCACCGCCGAGGACATGGTGGTG
CTCTCCGGCGCGCACACCGTCGGCCGCTCCCACTGCTCCTCCTTCACCAACCGCCTCTAC
GGCTTCAGCAACGGCAGCGACGTCGACCCGGCCATCAGCTCCGCCTACGCCTTCCTGCTC
AGGAGCATCTGCCCCTCCAACACCACCCGCTTCTTCCCCCCCAACACCACCACGGACATG
GACCTCATCACGCCCGCCGTGCTCGACAACAAGTACTACGTGGGGCTCACCAACAACCTC
GGGCTCTTCACGTCGGACCAGGCGCTGCTCACCAACGCCACGCTCAAGAAGTCCGTCGAT
GAGTTCGTCAAGAGCGACAGCAAGTGGAAGAGCAAGTTCGCCAAGTCCATGGTCAAGATG
GGCAACATCGAGGTGCTCACGGGCACGCAGGGGGAGATCAGGCTCAGCTGCAGGGTCATC
AACAACGGCGCCGGCAGCAGCAGCAGCAGCGCTGGATTATTCGAGCTTCAAATGACAACC
GACAACTCTGCTCAGGAGGAATCAGCAGCGAACTAG

Peptide Sequence

PEP ID

EES00688
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:16165846:16168878:1 gene:SORBI_3003G152200 transcript:EES00688 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEAARSYFFVAAVAVVLIALLPASAIAAGLKVGFYNKSCPSAEALVQQAVAAAFKNDSGI
AAGLIRLHFHDCFVRGCDGSVLIDSTANNTAEKDAPPNNPSLRGFEVIDAAKAAIEAQCP
KTVSCADILAFAARDSVALSSSSASGSGKNLTYKVPAGRRDGRVSRDTDANSNLPSPLST
AAELVGNFTRKNLTAEDMVVLSGAHTVGRSHCSSFTNRLYGFSNGSDVDPAISSAYAFLL
RSICPSNTTRFFPPNTTTDMDLITPAVLDNKYYVGLTNNLGLFTSDQALLTNATLKKSVD
EFVKSDSKWKSKFAKSMVKMGNIEVLTGTQGEIRLSCRVINNGAGSSSSSAGLFELQMTT
DNSAQEESAAN

Transcript Sequence

Transcript ID

EES00688
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:16165846:16168878:1 gene:SORBI_3003G152200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAGAGCAACCCAATGGCACCACTTGTGCAGTGCACACTCTGGCACACTTTCACATTGTTG
TTTGACCAACCTGCCCTTCAATTTCATATGGAAAAACGATAACAGGTGTAGTACTAGGCT
ATATAATCCACAAACACGGACAGGGTTTTTCGCAAGGATTTCCCAGCCTAAGAACCAGCT
CCTGGAACAAGCTTCCTGACTGTCAAAAATGGAGGCTGCGCGTAGCTACTTCTTCGTCGC
CGCGGTTGCCGTCGTCCTTATTGCGCTTCTCCCGGCCAGCGCCATAGCCGCCGGCCTCAA
GGTCGGCTTCTACAACAAGTCATGCCCGTCGGCGGAGGCCCTGGTGCAGCAGGCGGTGGC
TGCCGCCTTCAAGAACGACAGCGGCATCGCCGCCGGCCTCATCCGCCTGCACTTCCATGA
CTGCTTCGTCAGGGGCTGCGACGGCTCGGTGCTGATCGACTCGACGGCGAACAACACGGC
GGAGAAGGACGCGCCCCCGAACAACCCGAGCCTTCGTGGCTTCGAGGTCATCGACGCCGC
CAAGGCGGCGATCGAGGCGCAGTGCCCCAAGACGGTCTCGTGCGCCGACATCCTGGCGTT
CGCGGCGCGGGACAGCGTCGCGCTGTCGTCGTCGTCGGCGTCGGGGAGCGGCAAGAACCT
GACGTACAAGGTCCCCGCGGGGCGGCGCGACGGGCGGGTGTCGAGGGACACGGACGCCAA
CAGCAACCTCCCCTCGCCGCTCTCCACCGCCGCCGAGCTCGTCGGCAACTTCACGCGCAA
GAACCTCACCGCCGAGGACATGGTGGTGCTCTCCGGCGCGCACACCGTCGGCCGCTCCCA
CTGCTCCTCCTTCACCAACCGCCTCTACGGCTTCAGCAACGGCAGCGACGTCGACCCGGC
CATCAGCTCCGCCTACGCCTTCCTGCTCAGGAGCATCTGCCCCTCCAACACCACCCGCTT
CTTCCCCCCCAACACCACCACGGACATGGACCTCATCACGCCCGCCGTGCTCGACAACAA
GTACTACGTGGGGCTCACCAACAACCTCGGGCTCTTCACGTCGGACCAGGCGCTGCTCAC
CAACGCCACGCTCAAGAAGTCCGTCGATGAGTTCGTCAAGAGCGACAGCAAGTGGAAGAG
CAAGTTCGCCAAGTCCATGGTCAAGATGGGCAACATCGAGGTGCTCACGGGCACGCAGGG
GGAGATCAGGCTCAGCTGCAGGGTCATCAACAACGGCGCCGGCAGCAGCAGCAGCAGCGC
TGGATTATTCGAGCTTCAAATGACAACCGACAACTCTGCTCAGGAGGAATCAGCAGCGAA
CTAGCAGGTAGGTAGTACCAGCTATCTGTAGAGGATCTAGTGATCCACTACTACTGCTGC
TGCTGTCTGCATAGCCAGTGACGATGTTCTTCAGCACTGCGATGATGAGTTCTACCATGT
CACCTACTGCTCTTGACCTGCAGAAATGAAATAAACATCTTCTGAACATATAAATTTAAA
ACATGGGGCAATTCCTTTTTCTGCTTGTCTGATGTTGGATTACCTGTGTGTAACTACCTC
TCCATTAATTTCAAATTACAAGTC